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The map label for this gene is glpQ [H]

Identifier: 187918115

GI number: 187918115

Start: 249331

End: 250353

Strand: Direct

Name: glpQ [H]

Synonym: BH0241B

Alternate gene names: 187918115

Gene position: 249331-250353 (Clockwise)

Preceding gene: 187918114

Following gene: 187918116

Centisome position: 27.03

GC content: 31.77

Gene sequence:

>1023_bases
ATGAAATCAATTAAAGCAAAATCATTAATATTTATAATTAACATTTTTCTCACAATTTCCTGTCAGGGCGAAAAAATGAG
TCAAAACCAAAAATCACCATTAGTTATAGCTCACAGAGGTGCCAGCGGATATCTTCCAGAACATACCTTAGAAGCTAAAG
CATACGCTTATGCCTTAGGAGCTGACTACCTAGAACAAGACATTGTTTTAACAAAGGATAATATTCCTGTTATAATGCAC
GATCCAGAACTTGATACAACAACAAACGTTGCAAAACTATTTCCCGAAAGAGCTAGAGAAAACGGAAGGTATTATTCTGT
TGATTTCACACTAGATGAACTTAAATCATTAAGCCTTAGTGAAAGATTTGATCCGGCAAGCAGAAACCCAATATATCCTA
ACCGTTTCCCCCTAAATGAACATGATTTTAAAATTCCAACTTTAGAAGAAGAAATACAATTTATACAAGGATTAAATAAA
AGCACAGGTAGGAATGTTGGAATTTATCCTGAGATTAAAAAACCATTATGGCATAAACAACAAGGTAAAGACATATCTAA
AATTGTAATAGAAATTTTAAATAAATACGGATATAAATCAAAAGAAGACAAAATTTATCTTCAAACATTCGATTTTGACG
AATTAAAGAGAATAAGGGAAGAACTTGGATATCAAGGAAAATTAATAATGCTTGTTGGTGAGAATGACTGGGATGAAGCA
CCAACAGACTATGAATATATCAAATCAGAAGAAGGTATGGCAGAAGTTGCAAAATATTCTGATGGAATTGGACCTTGGAT
ACCCCAAATTATAATTGAAGGCAAAATAACAGATCTTACAAGTTTAGCACATAAACATAATATGGAGGTTCATCCTTACA
CATTTAGAATTGACGCATTGCCTTCATATGTAAAAGATGCAGATGAACTATTAGATTTATTATTCAACAAAGCAAAAGTA
GATGGTATATTTACAGACTTTACTGATACAGTAGTGAATTTCATCACAAAAATAAAACCATAG

Upstream 100 bases:

>100_bases
AAACTACAATAGTAATTATTACAATAGGCATTATATAAAAATAAAAGGTTAATAAATTATGTTATATAATATAATAATCA
TAAGTATGAGAGGTTAAATA

Downstream 100 bases:

>100_bases
CCTTAATAAGGAGAATATTTAACTCTTATGAGTAAAAATGGAAAAGAAGAATTAAAAAACATTGATAATCAAGCTTTTGA
TTTAATCATAGTTGGCGGAG

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MKSIKAKSLIFIINIFLTISCQGEKMSQNQKSPLVIAHRGASGYLPEHTLEAKAYAYALGADYLEQDIVLTKDNIPVIMH
DPELDTTTNVAKLFPERARENGRYYSVDFTLDELKSLSLSERFDPASRNPIYPNRFPLNEHDFKIPTLEEEIQFIQGLNK
STGRNVGIYPEIKKPLWHKQQGKDISKIVIEILNKYGYKSKEDKIYLQTFDFDELKRIREELGYQGKLIMLVGENDWDEA
PTDYEYIKSEEGMAEVAKYSDGIGPWIPQIIIEGKITDLTSLAHKHNMEVHPYTFRIDALPSYVKDADELLDLLFNKAKV
DGIFTDFTDTVVNFITKIKP

Sequences:

>Translated_340_residues
MKSIKAKSLIFIINIFLTISCQGEKMSQNQKSPLVIAHRGASGYLPEHTLEAKAYAYALGADYLEQDIVLTKDNIPVIMH
DPELDTTTNVAKLFPERARENGRYYSVDFTLDELKSLSLSERFDPASRNPIYPNRFPLNEHDFKIPTLEEEIQFIQGLNK
STGRNVGIYPEIKKPLWHKQQGKDISKIVIEILNKYGYKSKEDKIYLQTFDFDELKRIREELGYQGKLIMLVGENDWDEA
PTDYEYIKSEEGMAEVAKYSDGIGPWIPQIIIEGKITDLTSLAHKHNMEVHPYTFRIDALPSYVKDADELLDLLFNKAKV
DGIFTDFTDTVVNFITKIKP
>Mature_340_residues
MKSIKAKSLIFIINIFLTISCQGEKMSQNQKSPLVIAHRGASGYLPEHTLEAKAYAYALGADYLEQDIVLTKDNIPVIMH
DPELDTTTNVAKLFPERARENGRYYSVDFTLDELKSLSLSERFDPASRNPIYPNRFPLNEHDFKIPTLEEEIQFIQGLNK
STGRNVGIYPEIKKPLWHKQQGKDISKIVIEILNKYGYKSKEDKIYLQTFDFDELKRIREELGYQGKLIMLVGENDWDEA
PTDYEYIKSEEGMAEVAKYSDGIGPWIPQIIIEGKITDLTSLAHKHNMEVHPYTFRIDALPSYVKDADELLDLLFNKAKV
DGIFTDFTDTVVNFITKIKP

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI33457301, Length=122, Percent_Identity=37.7049180327869, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI21361649, Length=100, Percent_Identity=37, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI284055242, Length=100, Percent_Identity=37, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI284055245, Length=100, Percent_Identity=37, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI284055240, Length=100, Percent_Identity=37, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI1788572, Length=342, Percent_Identity=50, Blast_Score=338, Evalue=2e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 39036; Mature: 39036

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIKAKSLIFIINIFLTISCQGEKMSQNQKSPLVIAHRGASGYLPEHTLEAKAYAYALG
CCCCCHHHHHEEEEEEEEEEECCCHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHC
ADYLEQDIVLTKDNIPVIMHDPELDTTTNVAKLFPERARENGRYYSVDFTLDELKSLSLS
HHHHHCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHHHHCCCHH
ERFDPASRNPIYPNRFPLNEHDFKIPTLEEEIQFIQGLNKSTGRNVGIYPEIKKPLWHKQ
HCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHCC
QGKDISKIVIEILNKYGYKSKEDKIYLQTFDFDELKRIREELGYQGKLIMLVGENDWDEA
CCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCC
PTDYEYIKSEEGMAEVAKYSDGIGPWIPQIIIEGKITDLTSLAHKHNMEVHPYTFRIDAL
CCCHHHHHCCCCHHHHHHHCCCCCCCHHHHEECCCHHHHHHHHHHCCCCCCCEEEEECCC
PSYVKDADELLDLLFNKAKVDGIFTDFTDTVVNFITKIKP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSIKAKSLIFIINIFLTISCQGEKMSQNQKSPLVIAHRGASGYLPEHTLEAKAYAYALG
CCCCCHHHHHEEEEEEEEEEECCCHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHC
ADYLEQDIVLTKDNIPVIMHDPELDTTTNVAKLFPERARENGRYYSVDFTLDELKSLSLS
HHHHHCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHHHHCCCHH
ERFDPASRNPIYPNRFPLNEHDFKIPTLEEEIQFIQGLNKSTGRNVGIYPEIKKPLWHKQ
HCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHCC
QGKDISKIVIEILNKYGYKSKEDKIYLQTFDFDELKRIREELGYQGKLIMLVGENDWDEA
CCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCC
PTDYEYIKSEEGMAEVAKYSDGIGPWIPQIIIEGKITDLTSLAHKHNMEVHPYTFRIDAL
CCCHHHHHCCCCHHHHHHHCCCCCCCHHHHEECCCHHHHHHHHHHCCCCCCCEEEEECCC
PSYVKDADELLDLLFNKAKVDGIFTDFTDTVVNFITKIKP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1851953; 9205837; 9278503; 3329281; 8899705 [H]