Definition | Borrelia hermsii DAH chromosome, complete genome. |
---|---|
Accession | NC_010673 |
Length | 922,307 |
Click here to switch to the map view.
The map label for this gene is gtaB [H]
Identifier: 187918080
GI number: 187918080
Start: 207771
End: 208604
Strand: Direct
Name: gtaB [H]
Synonym: BH0207
Alternate gene names: 187918080
Gene position: 207771-208604 (Clockwise)
Preceding gene: 187918078
Following gene: 187918081
Centisome position: 22.53
GC content: 30.34
Gene sequence:
>834_bases ATGAAAGGTATTATCTTAGCAGCAGGGTATGGAACAAGATTCTTACCCATTACAAAAACTATTCCAAAGGAAATGCTACC AATTTTAAACAAACCGTCAATCGATTACATTATTGAAGAATTTACTAGTTCTGGAATCAAAGAAATACTAATAATAACCT CAAGAAGAAAGGGAGCTTTGGATAATTATTTTGATAGAGAAATTGAACTTGAGACTGAATTTGCTAAAAAATATAGAGAA GATTTGCTAAAAAAAATTAAACTTAAAGACATTAATATTAGCTTTATAAGGCAAAATGAAATGATGGGCACAGGTCATGC TTTACTGCAGGTAAAACCCTGGATAGGAACTGAAAGTGTAATAGTTGCATACCCTGATGATTTACATGTTGGATCCCCAC CCTTAACAGCACAACTAATAGAATTGCATAAAAAAACTGGAAAAAACATATTATCTGTCATTGAAAATCCCAAAGATATC AACAGATACGGAGTAATAGAATTAAATAAAGACAATATTCATGTCAAAGACATAGTAGAAAAACCAGAAATTGGAAAAGA ACCAAGCAATAAAGCATCTATTGGAAGATTCTTATATACCCATGAATTTTTCAAATTTTTAGAAGAAGGGTTTAAACTTC ATCAAAAAGGAGAATATCATCATATTTATGCTTTAAAAAAACTCATGTCTGAGAACAAAGTATTATACAAAGAAATAGAA GGAGAAAGACTTGATATAGGTGATATTGGGGGTTATTTAGAAGCAATAATCAAAATTGCAAAACGCAATGATCAATTGCT ACAAATCATCAAAGACTCACTAAGGACTAAATGA
Upstream 100 bases:
>100_bases TGCACTTACATGCATAAGGACAAATTCTAAATCATTTTTCAAAAAAATTAAATATTTATGATTTAAATTTTGATATAATT TTATTTAAGAGAGACAAAAA
Downstream 100 bases:
>100_bases ATATATCAACAAAATGCCAAGAGTTTTATGATGCTCTTAGCATATTAAAAAAATACATACATATAAACATAGAAGAAAAA ATTTTAAGATACAGCATTTT
Product: UTP--glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKGIILAAGYGTRFLPITKTIPKEMLPILNKPSIDYIIEEFTSSGIKEILIITSRRKGALDNYFDREIELETEFAKKYRE DLLKKIKLKDINISFIRQNEMMGTGHALLQVKPWIGTESVIVAYPDDLHVGSPPLTAQLIELHKKTGKNILSVIENPKDI NRYGVIELNKDNIHVKDIVEKPEIGKEPSNKASIGRFLYTHEFFKFLEEGFKLHQKGEYHHIYALKKLMSENKVLYKEIE GERLDIGDIGGYLEAIIKIAKRNDQLLQIIKDSLRTK
Sequences:
>Translated_277_residues MKGIILAAGYGTRFLPITKTIPKEMLPILNKPSIDYIIEEFTSSGIKEILIITSRRKGALDNYFDREIELETEFAKKYRE DLLKKIKLKDINISFIRQNEMMGTGHALLQVKPWIGTESVIVAYPDDLHVGSPPLTAQLIELHKKTGKNILSVIENPKDI NRYGVIELNKDNIHVKDIVEKPEIGKEPSNKASIGRFLYTHEFFKFLEEGFKLHQKGEYHHIYALKKLMSENKVLYKEIE GERLDIGDIGGYLEAIIKIAKRNDQLLQIIKDSLRTK >Mature_277_residues MKGIILAAGYGTRFLPITKTIPKEMLPILNKPSIDYIIEEFTSSGIKEILIITSRRKGALDNYFDREIELETEFAKKYRE DLLKKIKLKDINISFIRQNEMMGTGHALLQVKPWIGTESVIVAYPDDLHVGSPPLTAQLIELHKKTGKNILSVIENPKDI NRYGVIELNKDNIHVKDIVEKPEIGKEPSNKASIGRFLYTHEFFKFLEEGFKLHQKGEYHHIYALKKLMSENKVLYKEIE GERLDIGDIGGYLEAIIKIAKRNDQLLQIIKDSLRTK
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in the S.aureus membrane, which is also used as a mem
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=266, Percent_Identity=23.6842105263158, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1788355, Length=282, Percent_Identity=32.6241134751773, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1787488, Length=282, Percent_Identity=31.5602836879433, Blast_Score=138, Evalue=4e-34, Organism=Escherichia coli, GI1790224, Length=252, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=5e-16, Organism=Caenorhabditis elegans, GI133931050, Length=200, Percent_Identity=23.5, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320148, Length=283, Percent_Identity=25.0883392226148, Blast_Score=65, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 31832; Mature: 31832
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGIILAAGYGTRFLPITKTIPKEMLPILNKPSIDYIIEEFTSSGIKEILIITSRRKGAL CCCEEEECCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCC DNYFDREIELETEFAKKYREDLLKKIKLKDINISFIRQNEMMGTGHALLQVKPWIGTESV HHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCCCE IVAYPDDLHVGSPPLTAQLIELHKKTGKNILSVIENPKDINRYGVIELNKDNIHVKDIVE EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEHHHHHC KPEIGKEPSNKASIGRFLYTHEFFKFLEEGFKLHQKGEYHHIYALKKLMSENKVLYKEIE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEHHCC GERLDIGDIGGYLEAIIKIAKRNDQLLQIIKDSLRTK CCEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure MKGIILAAGYGTRFLPITKTIPKEMLPILNKPSIDYIIEEFTSSGIKEILIITSRRKGAL CCCEEEECCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCC DNYFDREIELETEFAKKYREDLLKKIKLKDINISFIRQNEMMGTGHALLQVKPWIGTESV HHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCCCE IVAYPDDLHVGSPPLTAQLIELHKKTGKNILSVIENPKDINRYGVIELNKDNIHVKDIVE EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEHHHHHC KPEIGKEPSNKASIGRFLYTHEFFKFLEEGFKLHQKGEYHHIYALKKLMSENKVLYKEIE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEHHCC GERLDIGDIGGYLEAIIKIAKRNDQLLQIIKDSLRTK CCEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA