Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918081
Identifier: 187918081
GI number: 187918081
Start: 208601
End: 210313
Strand: Direct
Name: 187918081
Synonym: BH0208
Alternate gene names: NA
Gene position: 208601-210313 (Clockwise)
Preceding gene: 187918080
Following gene: 187918082
Centisome position: 22.62
GC content: 22.83
Gene sequence:
>1713_bases ATGAATATATCAACAAAATGCCAAGAGTTTTATGATGCTCTTAGCATATTAAAAAAATACATACATATAAACATAGAAGA AAAAATTTTAAGATACAGCATTTTATCAAAACTATACAAACTCAACGAAGAAGCAATTAAAGATCTTATCAAAATAAGTC AAGATTATGAACTTAAAAAAAATAAAATAAATATCACACTTGAAGAATATTATTATGAGGAAACACAGGATCAAAAAATA AAGAACTGGATCCTAGCAATAATTAGGGAAAAAAATTTATTACAAATAAAGAAAGAAACAAATCTTATTAGCAAAAGACC TGGAATAACATATAAATTAAACTCTACCAACTTTCTAAAAATAATTGAAATGCAAAATAACAGCAAATACACACAAGAAA AAAAAGAATTATATAAACAATTAATATTAAATTTCTCTAGTAACTTAAAAATAGCAAATCTAGAACCAACAATAGATATA CTAATAGCCGTAAAACATAGGAACAAGGAAAAAATTAGATACATAATAAAATACAATCAATCATTTCAAAGATTATTTAA ATCAAGCTTAAGAAAAAAACAAAGTAGAGTAATCAAGCTAAAAAAATTACTTATTTTAATCTACTGGCCAGTAGGGTGTC TATCCAAATCACTTTTCAATAAAATTTTAACAAAAAACTATAGATACATAATAGACGAAGTTTTAACCTTAAAGTACGAC GAGATTTTAAAATACTTACAAACAATCAAAACTTTAAGTCTTAATGAAATCTTTTACAAAGGATCAAATAAAAATTCTAA TTTTAATTACTTTTTCAGTGAATTTACAAAATATACCCCAAACGATTTTCAAAATACTTTAAAAACTTATTTATTTTCAC TTGAAAAAACCGCAATAAAACAATACCTAGAATGGTTTTTTAAAGACAAAGTACCAAATAAATGGAAAGATTTTATATTT GCAATTGAATATATTAAAACACATAAACTGCTAAACCTAAATGCAAATATAGAAAATATGATCATAGCAAAATTTAAAGC AGAAGATTTCTTTGTATCTTTTGAAAAGATGAATTTCAACCCATATGAAAGTTCAAAAATATTTCAAAATAAATACATAA AAAAAATATTTCTACAAAATGTAATAAATTACATAAAAAACAATACGACAAAAATAGATACATACGGATGGATTGCATTT TACATCTATGCGGACAAAGATACTAAAACAAAATTCTCAAAAGATATAAAAAACTTTTTTAAGAGCAAAAATTTTGAAAT TCAAAATCAAATATTTGTATATTTCCTATCCTTTTATCCAAATATTGATAAAAAACATTTTGAATTCATATCAGAAATAA TGATACACCTTGATGAAGATAAAATCACAATACCTCAAGAAATAATAAAAATGCAAAAAACAAGTTCTAACAGGTTAAAT TATCGTAAATCATACATTTTCATCCAATCATTAATTTTAAGAACAAGGGTATTTAAGATATTACATAAAAATATTAAACT AGAACTGCTATTTAAATTAGAAGAATTTAAAACTGAAAAACTACTACCTGCCATATGTTATATTATTTGTTATTACAAAC CAGATGCACTCAAAGAAGAACAAACAATCTCACCCAAACAAAAAGAAGAAATAATAAAATTCATTACACTTTTCACTAAA GAACAAAATAAATTTGATTTTAAAACACTATGA
Upstream 100 bases:
>100_bases TTGATATAGGTGATATTGGGGGTTATTTAGAAGCAATAATCAAAATTGCAAAACGCAATGATCAATTGCTACAAATCATC AAAGACTCACTAAGGACTAA
Downstream 100 bases:
>100_bases AATATAGAAATATTTGCTTGAAAGTAATAAAATAGTACTTATAAAAGATATGAAGAAATGTTTATTATCGCTTAAAAATT TGATCATCTTGCTTATTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 570; Mature: 570
Protein sequence:
>570_residues MNISTKCQEFYDALSILKKYIHINIEEKILRYSILSKLYKLNEEAIKDLIKISQDYELKKNKINITLEEYYYEETQDQKI KNWILAIIREKNLLQIKKETNLISKRPGITYKLNSTNFLKIIEMQNNSKYTQEKKELYKQLILNFSSNLKIANLEPTIDI LIAVKHRNKEKIRYIIKYNQSFQRLFKSSLRKKQSRVIKLKKLLILIYWPVGCLSKSLFNKILTKNYRYIIDEVLTLKYD EILKYLQTIKTLSLNEIFYKGSNKNSNFNYFFSEFTKYTPNDFQNTLKTYLFSLEKTAIKQYLEWFFKDKVPNKWKDFIF AIEYIKTHKLLNLNANIENMIIAKFKAEDFFVSFEKMNFNPYESSKIFQNKYIKKIFLQNVINYIKNNTTKIDTYGWIAF YIYADKDTKTKFSKDIKNFFKSKNFEIQNQIFVYFLSFYPNIDKKHFEFISEIMIHLDEDKITIPQEIIKMQKTSSNRLN YRKSYIFIQSLILRTRVFKILHKNIKLELLFKLEEFKTEKLLPAICYIICYYKPDALKEEQTISPKQKEEIIKFITLFTK EQNKFDFKTL
Sequences:
>Translated_570_residues MNISTKCQEFYDALSILKKYIHINIEEKILRYSILSKLYKLNEEAIKDLIKISQDYELKKNKINITLEEYYYEETQDQKI KNWILAIIREKNLLQIKKETNLISKRPGITYKLNSTNFLKIIEMQNNSKYTQEKKELYKQLILNFSSNLKIANLEPTIDI LIAVKHRNKEKIRYIIKYNQSFQRLFKSSLRKKQSRVIKLKKLLILIYWPVGCLSKSLFNKILTKNYRYIIDEVLTLKYD EILKYLQTIKTLSLNEIFYKGSNKNSNFNYFFSEFTKYTPNDFQNTLKTYLFSLEKTAIKQYLEWFFKDKVPNKWKDFIF AIEYIKTHKLLNLNANIENMIIAKFKAEDFFVSFEKMNFNPYESSKIFQNKYIKKIFLQNVINYIKNNTTKIDTYGWIAF YIYADKDTKTKFSKDIKNFFKSKNFEIQNQIFVYFLSFYPNIDKKHFEFISEIMIHLDEDKITIPQEIIKMQKTSSNRLN YRKSYIFIQSLILRTRVFKILHKNIKLELLFKLEEFKTEKLLPAICYIICYYKPDALKEEQTISPKQKEEIIKFITLFTK EQNKFDFKTL >Mature_570_residues MNISTKCQEFYDALSILKKYIHINIEEKILRYSILSKLYKLNEEAIKDLIKISQDYELKKNKINITLEEYYYEETQDQKI KNWILAIIREKNLLQIKKETNLISKRPGITYKLNSTNFLKIIEMQNNSKYTQEKKELYKQLILNFSSNLKIANLEPTIDI LIAVKHRNKEKIRYIIKYNQSFQRLFKSSLRKKQSRVIKLKKLLILIYWPVGCLSKSLFNKILTKNYRYIIDEVLTLKYD EILKYLQTIKTLSLNEIFYKGSNKNSNFNYFFSEFTKYTPNDFQNTLKTYLFSLEKTAIKQYLEWFFKDKVPNKWKDFIF AIEYIKTHKLLNLNANIENMIIAKFKAEDFFVSFEKMNFNPYESSKIFQNKYIKKIFLQNVINYIKNNTTKIDTYGWIAF YIYADKDTKTKFSKDIKNFFKSKNFEIQNQIFVYFLSFYPNIDKKHFEFISEIMIHLDEDKITIPQEIIKMQKTSSNRLN YRKSYIFIQSLILRTRVFKILHKNIKLELLFKLEEFKTEKLLPAICYIICYYKPDALKEEQTISPKQKEEIIKFITLFTK EQNKFDFKTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69018; Mature: 69018
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISTKCQEFYDALSILKKYIHINIEEKILRYSILSKLYKLNEEAIKDLIKISQDYELKK CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEECC NKINITLEEYYYEETQDQKIKNWILAIIREKNLLQIKKETNLISKRPGITYKLNSTNFLK CEEEEEEHHHHHHCHHHHHHHHHHHHHHHCCCCEEEHHHHCHHHCCCCEEEEECCCCEEE IIEMQNNSKYTQEKKELYKQLILNFSSNLKIANLEPTIDILIAVKHRNKEKIRYIIKYNQ EEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEEECCCHHHHHHHEEECH SFQRLFKSSLRKKQSRVIKLKKLLILIYWPVGCLSKSLFNKILTKNYRYIIDEVLTLKYD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHH EILKYLQTIKTLSLNEIFYKGSNKNSNFNYFFSEFTKYTPNDFQNTLKTYLFSLEKTAIK HHHHHHHHHHHCCHHHHEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH QYLEWFFKDKVPNKWKDFIFAIEYIKTHKLLNLNANIENMIIAKFKAEDFFVSFEKMNFN HHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEECCHHEEEEEECCCC PYESSKIFQNKYIKKIFLQNVINYIKNNTTKIDTYGWIAFYIYADKDTKTKFSKDIKNFF CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEEEEEEEEECCCCHHHHHHHHHHHH KSKNFEIQNQIFVYFLSFYPNIDKKHFEFISEIMIHLDEDKITIPQEIIKMQKTSSNRLN HCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCH YRKSYIFIQSLILRTRVFKILHKNIKLELLFKLEEFKTEKLLPAICYIICYYKPDALKEE HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHEEECCCCCCCC QTISPKQKEEIIKFITLFTKEQNKFDFKTL CCCCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNISTKCQEFYDALSILKKYIHINIEEKILRYSILSKLYKLNEEAIKDLIKISQDYELKK CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEECC NKINITLEEYYYEETQDQKIKNWILAIIREKNLLQIKKETNLISKRPGITYKLNSTNFLK CEEEEEEHHHHHHCHHHHHHHHHHHHHHHCCCCEEEHHHHCHHHCCCCEEEEECCCCEEE IIEMQNNSKYTQEKKELYKQLILNFSSNLKIANLEPTIDILIAVKHRNKEKIRYIIKYNQ EEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEEECCCHHHHHHHEEECH SFQRLFKSSLRKKQSRVIKLKKLLILIYWPVGCLSKSLFNKILTKNYRYIIDEVLTLKYD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHH EILKYLQTIKTLSLNEIFYKGSNKNSNFNYFFSEFTKYTPNDFQNTLKTYLFSLEKTAIK HHHHHHHHHHHCCHHHHEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH QYLEWFFKDKVPNKWKDFIFAIEYIKTHKLLNLNANIENMIIAKFKAEDFFVSFEKMNFN HHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEECCHHEEEEEECCCC PYESSKIFQNKYIKKIFLQNVINYIKNNTTKIDTYGWIAFYIYADKDTKTKFSKDIKNFF CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEEEEEEEEECCCCHHHHHHHHHHHH KSKNFEIQNQIFVYFLSFYPNIDKKHFEFISEIMIHLDEDKITIPQEIIKMQKTSSNRLN HCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCH YRKSYIFIQSLILRTRVFKILHKNIKLELLFKLEEFKTEKLLPAICYIICYYKPDALKEE HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHEEECCCCCCCC QTISPKQKEEIIKFITLFTKEQNKFDFKTL CCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]