| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187736536
Identifier: 187736536
GI number: 187736536
Start: 2501805
End: 2502308
Strand: Reverse
Name: 187736536
Synonym: Amuc_2057
Alternate gene names: NA
Gene position: 2502308-2501805 (Counterclockwise)
Preceding gene: 187736537
Following gene: 187736535
Centisome position: 93.93
GC content: 52.78
Gene sequence:
>504_bases ATGATGAACAGACATTTTATTTTTGCATTGTGTACTGTGCTGGGGTTCAGCGTTTCCGGCATTTCCATGGCTCAAAGCGT TCCCACGGACAAGGAAGCCGCAGCCAAGGCTGCCAAGGCGGCGAAAGTGAAATTCCGCTGGGGCAAGAGCCTGAAAAGCG CTCAAAAGCAGGCGGAGGAAACCGGCCTTCCCATTGTTCTTCTTTTCACGGGAACGTCCTGGTGCGGCTTTTGTGTTAAG CTGGAGAAAGAAATCCTTTCCAAAAAGGACTTCAAACAAGGCATGGACGGCGTGGCCATTGGCGTCAAATTTGAGTTCGG CAGTTCGGATTTCAGCAAGTCCAAGGAAGCCAAGACGTATAACATTACCGGCGTGCCGGCCATGGTGGTGGTGGATGCGG ATGGCAAGGAGCTGGGCCGCACGGGTTATGTTCCCGGCCGTACTCCCGCCCAGTACGTTGAATTTTTCAAGAAATACGCA CCCAAGACTGCGGAAGGCAAGTAA
Upstream 100 bases:
>100_bases TGGGGACGGGGGACGGAAGAGTTCCTTCGAGGAAAAAGACACTGATTTCTCTTCCTATACAAAGTATTTCTGCTAGTCTG AGAGGAACGTTTCACAGAGT
Downstream 100 bases:
>100_bases GGCAGGTGCTCCGGAGAGGAGCTTGATTAACAGGAGCGGCGGACGAGAATCCGGCGCTCTTTTTTTGTTCCGGCAAGAGA GGCTGGAAATTTGTTCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MMNRHFIFALCTVLGFSVSGISMAQSVPTDKEAAAKAAKAAKVKFRWGKSLKSAQKQAEETGLPIVLLFTGTSWCGFCVK LEKEILSKKDFKQGMDGVAIGVKFEFGSSDFSKSKEAKTYNITGVPAMVVVDADGKELGRTGYVPGRTPAQYVEFFKKYA PKTAEGK
Sequences:
>Translated_167_residues MMNRHFIFALCTVLGFSVSGISMAQSVPTDKEAAAKAAKAAKVKFRWGKSLKSAQKQAEETGLPIVLLFTGTSWCGFCVK LEKEILSKKDFKQGMDGVAIGVKFEFGSSDFSKSKEAKTYNITGVPAMVVVDADGKELGRTGYVPGRTPAQYVEFFKKYA PKTAEGK >Mature_167_residues MMNRHFIFALCTVLGFSVSGISMAQSVPTDKEAAAKAAKAAKVKFRWGKSLKSAQKQAEETGLPIVLLFTGTSWCGFCVK LEKEILSKKDFKQGMDGVAIGVKFEFGSSDFSKSKEAKTYNITGVPAMVVVDADGKELGRTGYVPGRTPAQYVEFFKKYA PKTAEGK
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18123; Mature: 18123
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNRHFIFALCTVLGFSVSGISMAQSVPTDKEAAAKAAKAAKVKFRWGKSLKSAQKQAEE CCCCHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHEEEHHCHHHHHHHHHHHH TGLPIVLLFTGTSWCGFCVKLEKEILSKKDFKQGMDGVAIGVKFEFGSSDFSKSKEAKTY CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEE NITGVPAMVVVDADGKELGRTGYVPGRTPAQYVEFFKKYAPKTAEGK EECCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MMNRHFIFALCTVLGFSVSGISMAQSVPTDKEAAAKAAKAAKVKFRWGKSLKSAQKQAEE CCCCHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHEEEHHCHHHHHHHHHHHH TGLPIVLLFTGTSWCGFCVKLEKEILSKKDFKQGMDGVAIGVKFEFGSSDFSKSKEAKTY CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEE NITGVPAMVVVDADGKELGRTGYVPGRTPAQYVEFFKKYAPKTAEGK EECCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA