Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736535

Identifier: 187736535

GI number: 187736535

Start: 2501280

End: 2501651

Strand: Reverse

Name: 187736535

Synonym: Amuc_2056

Alternate gene names: NA

Gene position: 2501651-2501280 (Counterclockwise)

Preceding gene: 187736536

Following gene: 187736534

Centisome position: 93.9

GC content: 53.23

Gene sequence:

>372_bases
ATGGGTTACGTATCAGGTCCCATCTGCATGCCTGAATTTACGAATGCATTTAGCGGCCTAAAGGAGGATCGGAAACTCAC
CCATGACGAATTGGTGAGAGCCATCCGGTTTATGATCGCAGCGGAATATGAATCCATCCAGCTTTATACCCAGCTTGCCG
CCTCCATTGATGACAAGCTGGCTCAAGAGGTGCTTTGGGATATTTCCAATGAGGAAAAGGAACACGCGGGCGAATTTCTC
CGCCTCCTCCAGGTGCTGGCCCCTGACGAGCAGGGCTTTTATGACGAGGGGATGGGGGAAACCAATGAAAAGATTGACAA
GCTGAAGGCGTCCTGCCCGGACGGCGCATGCAGCAGTTCCGCCGCCCATTGA

Upstream 100 bases:

>100_bases
GCGCTCTTTTTTTGTTCCGGCAAGAGAGGCTGGAAATTTGTTCGCTGGACTGCTTTAAGGCCACCATCGTATAAAAGTTA
TGACAAAGCATATTGAATGA

Downstream 100 bases:

>100_bases
CGGTGCTTTTCATCCTTTGCTGTAAAACGTCCGGTTTTCTTCAGGTGAAGCCGGGCGTTTTTCTGTTCCGGTCTTGCGGT
ATCTCTTTTCCTTATTACGT

Product: hypothetical protein

Products: NA

Alternate protein names: Rubrerythrin; Methyltransferase

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MGYVSGPICMPEFTNAFSGLKEDRKLTHDELVRAIRFMIAAEYESIQLYTQLAASIDDKLAQEVLWDISNEEKEHAGEFL
RLLQVLAPDEQGFYDEGMGETNEKIDKLKASCPDGACSSSAAH

Sequences:

>Translated_123_residues
MGYVSGPICMPEFTNAFSGLKEDRKLTHDELVRAIRFMIAAEYESIQLYTQLAASIDDKLAQEVLWDISNEEKEHAGEFL
RLLQVLAPDEQGFYDEGMGETNEKIDKLKASCPDGACSSSAAH
>Mature_122_residues
GYVSGPICMPEFTNAFSGLKEDRKLTHDELVRAIRFMIAAEYESIQLYTQLAASIDDKLAQEVLWDISNEEKEHAGEFLR
LLQVLAPDEQGFYDEGMGETNEKIDKLKASCPDGACSSSAAH

Specific function: Unknown

COG id: COG1633

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13690; Mature: 13559

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYVSGPICMPEFTNAFSGLKEDRKLTHDELVRAIRFMIAAEYESIQLYTQLAASIDDKL
CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQEVLWDISNEEKEHAGEFLRLLQVLAPDEQGFYDEGMGETNEKIDKLKASCPDGACSSS
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
AAH
CCC
>Mature Secondary Structure 
GYVSGPICMPEFTNAFSGLKEDRKLTHDELVRAIRFMIAAEYESIQLYTQLAASIDDKL
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQEVLWDISNEEKEHAGEFLRLLQVLAPDEQGFYDEGMGETNEKIDKLKASCPDGACSSS
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
AAH
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA