| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187736535
Identifier: 187736535
GI number: 187736535
Start: 2501280
End: 2501651
Strand: Reverse
Name: 187736535
Synonym: Amuc_2056
Alternate gene names: NA
Gene position: 2501651-2501280 (Counterclockwise)
Preceding gene: 187736536
Following gene: 187736534
Centisome position: 93.9
GC content: 53.23
Gene sequence:
>372_bases ATGGGTTACGTATCAGGTCCCATCTGCATGCCTGAATTTACGAATGCATTTAGCGGCCTAAAGGAGGATCGGAAACTCAC CCATGACGAATTGGTGAGAGCCATCCGGTTTATGATCGCAGCGGAATATGAATCCATCCAGCTTTATACCCAGCTTGCCG CCTCCATTGATGACAAGCTGGCTCAAGAGGTGCTTTGGGATATTTCCAATGAGGAAAAGGAACACGCGGGCGAATTTCTC CGCCTCCTCCAGGTGCTGGCCCCTGACGAGCAGGGCTTTTATGACGAGGGGATGGGGGAAACCAATGAAAAGATTGACAA GCTGAAGGCGTCCTGCCCGGACGGCGCATGCAGCAGTTCCGCCGCCCATTGA
Upstream 100 bases:
>100_bases GCGCTCTTTTTTTGTTCCGGCAAGAGAGGCTGGAAATTTGTTCGCTGGACTGCTTTAAGGCCACCATCGTATAAAAGTTA TGACAAAGCATATTGAATGA
Downstream 100 bases:
>100_bases CGGTGCTTTTCATCCTTTGCTGTAAAACGTCCGGTTTTCTTCAGGTGAAGCCGGGCGTTTTTCTGTTCCGGTCTTGCGGT ATCTCTTTTCCTTATTACGT
Product: hypothetical protein
Products: NA
Alternate protein names: Rubrerythrin; Methyltransferase
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MGYVSGPICMPEFTNAFSGLKEDRKLTHDELVRAIRFMIAAEYESIQLYTQLAASIDDKLAQEVLWDISNEEKEHAGEFL RLLQVLAPDEQGFYDEGMGETNEKIDKLKASCPDGACSSSAAH
Sequences:
>Translated_123_residues MGYVSGPICMPEFTNAFSGLKEDRKLTHDELVRAIRFMIAAEYESIQLYTQLAASIDDKLAQEVLWDISNEEKEHAGEFL RLLQVLAPDEQGFYDEGMGETNEKIDKLKASCPDGACSSSAAH >Mature_122_residues GYVSGPICMPEFTNAFSGLKEDRKLTHDELVRAIRFMIAAEYESIQLYTQLAASIDDKLAQEVLWDISNEEKEHAGEFLR LLQVLAPDEQGFYDEGMGETNEKIDKLKASCPDGACSSSAAH
Specific function: Unknown
COG id: COG1633
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13690; Mature: 13559
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYVSGPICMPEFTNAFSGLKEDRKLTHDELVRAIRFMIAAEYESIQLYTQLAASIDDKL CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQEVLWDISNEEKEHAGEFLRLLQVLAPDEQGFYDEGMGETNEKIDKLKASCPDGACSSS HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC AAH CCC >Mature Secondary Structure GYVSGPICMPEFTNAFSGLKEDRKLTHDELVRAIRFMIAAEYESIQLYTQLAASIDDKL CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQEVLWDISNEEKEHAGEFLRLLQVLAPDEQGFYDEGMGETNEKIDKLKASCPDGACSSS HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC AAH CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA