Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736534

Identifier: 187736534

GI number: 187736534

Start: 2500653

End: 2500997

Strand: Reverse

Name: 187736534

Synonym: Amuc_2055

Alternate gene names: NA

Gene position: 2500997-2500653 (Counterclockwise)

Preceding gene: 187736535

Following gene: 187736531

Centisome position: 93.88

GC content: 51.3

Gene sequence:

>345_bases
ATGCCTGAATTTACAAATGCATTTAGCGGATTAAAGGAAAACCGGAAACTCACCCATGGCGAATTGGTGAGAGCCATCCG
GTTCATGATTGCAGCGGAATATGAAGCTATCCAGCTTTATACCCAGCTTGCAGAATCCATAGACCATAAGCTGGCCCAGG
AAGTTCTGCTGGATATTTCCAATGAGGAAAAGGAACACGCGGGCGAATTTCTCCGCCTCCTCCAGGTGCTGGCCCCTGAC
GAGCAGGGCTTTTATGACGAGGGGATGGGGGAAACGAATGAAAAGATAGACAAGCTGAAGGCGTCCTGCCCGGACGGCGC
ATGCAGCAGTTCCGCCTCTCATTGA

Upstream 100 bases:

>100_bases
TCTTAGACCATTGGTTATGAATAAAAATTCAAAGAATGTCGCTGAAAATATATGACAGGAACATTTTGAATGTATTCATT
GCAGTCTGGGTCATATCTGC

Downstream 100 bases:

>100_bases
CGGCGCCTTGCGTATGGTTAAAGCGCCCGGTTCCCCTGCAAAGGGGGCCGGGTATTTTCATGATGCCGGGCTTTTGCTTC
CAGCTCGGCCGCGCAGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MPEFTNAFSGLKENRKLTHGELVRAIRFMIAAEYEAIQLYTQLAESIDHKLAQEVLLDISNEEKEHAGEFLRLLQVLAPD
EQGFYDEGMGETNEKIDKLKASCPDGACSSSASH

Sequences:

>Translated_114_residues
MPEFTNAFSGLKENRKLTHGELVRAIRFMIAAEYEAIQLYTQLAESIDHKLAQEVLLDISNEEKEHAGEFLRLLQVLAPD
EQGFYDEGMGETNEKIDKLKASCPDGACSSSASH
>Mature_113_residues
PEFTNAFSGLKENRKLTHGELVRAIRFMIAAEYEAIQLYTQLAESIDHKLAQEVLLDISNEEKEHAGEFLRLLQVLAPDE
QGFYDEGMGETNEKIDKLKASCPDGACSSSASH

Specific function: Unknown

COG id: COG1633

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12730; Mature: 12599

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEFTNAFSGLKENRKLTHGELVRAIRFMIAAEYEAIQLYTQLAESIDHKLAQEVLLDIS
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NEEKEHAGEFLRLLQVLAPDEQGFYDEGMGETNEKIDKLKASCPDGACSSSASH
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PEFTNAFSGLKENRKLTHGELVRAIRFMIAAEYEAIQLYTQLAESIDHKLAQEVLLDIS
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NEEKEHAGEFLRLLQVLAPDEQGFYDEGMGETNEKIDKLKASCPDGACSSSASH
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA