| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187736534
Identifier: 187736534
GI number: 187736534
Start: 2500653
End: 2500997
Strand: Reverse
Name: 187736534
Synonym: Amuc_2055
Alternate gene names: NA
Gene position: 2500997-2500653 (Counterclockwise)
Preceding gene: 187736535
Following gene: 187736531
Centisome position: 93.88
GC content: 51.3
Gene sequence:
>345_bases ATGCCTGAATTTACAAATGCATTTAGCGGATTAAAGGAAAACCGGAAACTCACCCATGGCGAATTGGTGAGAGCCATCCG GTTCATGATTGCAGCGGAATATGAAGCTATCCAGCTTTATACCCAGCTTGCAGAATCCATAGACCATAAGCTGGCCCAGG AAGTTCTGCTGGATATTTCCAATGAGGAAAAGGAACACGCGGGCGAATTTCTCCGCCTCCTCCAGGTGCTGGCCCCTGAC GAGCAGGGCTTTTATGACGAGGGGATGGGGGAAACGAATGAAAAGATAGACAAGCTGAAGGCGTCCTGCCCGGACGGCGC ATGCAGCAGTTCCGCCTCTCATTGA
Upstream 100 bases:
>100_bases TCTTAGACCATTGGTTATGAATAAAAATTCAAAGAATGTCGCTGAAAATATATGACAGGAACATTTTGAATGTATTCATT GCAGTCTGGGTCATATCTGC
Downstream 100 bases:
>100_bases CGGCGCCTTGCGTATGGTTAAAGCGCCCGGTTCCCCTGCAAAGGGGGCCGGGTATTTTCATGATGCCGGGCTTTTGCTTC CAGCTCGGCCGCGCAGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MPEFTNAFSGLKENRKLTHGELVRAIRFMIAAEYEAIQLYTQLAESIDHKLAQEVLLDISNEEKEHAGEFLRLLQVLAPD EQGFYDEGMGETNEKIDKLKASCPDGACSSSASH
Sequences:
>Translated_114_residues MPEFTNAFSGLKENRKLTHGELVRAIRFMIAAEYEAIQLYTQLAESIDHKLAQEVLLDISNEEKEHAGEFLRLLQVLAPD EQGFYDEGMGETNEKIDKLKASCPDGACSSSASH >Mature_113_residues PEFTNAFSGLKENRKLTHGELVRAIRFMIAAEYEAIQLYTQLAESIDHKLAQEVLLDISNEEKEHAGEFLRLLQVLAPDE QGFYDEGMGETNEKIDKLKASCPDGACSSSASH
Specific function: Unknown
COG id: COG1633
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12730; Mature: 12599
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEFTNAFSGLKENRKLTHGELVRAIRFMIAAEYEAIQLYTQLAESIDHKLAQEVLLDIS CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NEEKEHAGEFLRLLQVLAPDEQGFYDEGMGETNEKIDKLKASCPDGACSSSASH CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PEFTNAFSGLKENRKLTHGELVRAIRFMIAAEYEAIQLYTQLAESIDHKLAQEVLLDIS CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NEEKEHAGEFLRLLQVLAPDEQGFYDEGMGETNEKIDKLKASCPDGACSSSASH CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA