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The map label for this gene is yngC [H]

Identifier: 187736532

GI number: 187736532

Start: 2499454

End: 2500104

Strand: Direct

Name: yngC [H]

Synonym: Amuc_2053

Alternate gene names: 187736532

Gene position: 2499454-2500104 (Clockwise)

Preceding gene: 187736530

Following gene: 187736533

Centisome position: 93.82

GC content: 59.6

Gene sequence:

>651_bases
ATGTCCTGGGTGCAGGACTGGGGATATGCGGGTGTCATCGTCCTGATGGCCATGGAAAGCTCCATCTTTCCCGTTCCCAG
CGAAGTGGTCATCCCGCCCGCGGCCATCCTGTCCGCCCAGGAAGGAGCATCCATGAGCTTCTGGGGAGTGGTGGCTGCCG
GAACGTTCGGCTCCTGGCTGGGTTCTGCCATAACCTATGCCGTGGCCCGAATCGTGGGCCGCCCGGTCATCATGCGCTGG
GGCAAATTCTTTTTCATGCCGCCCCACAAGGTGGAAAAAGCGGAAATCTTCCTTCAGCGGTACGAAGTTTCCGGTGTCTT
CTTCGCCCGCCTTCTGCCCGTCATCCGCCACCTCATTTCCATTCCCGCCGGCATTGTCCGCATGGGATTCGGCATTTTCT
CCCTGGTCACCGTGCTCGGCTCGTTTGCCTGGTGTACGGTGCTCGCCTGGTACGGGCACCGCATCGGGGAACGGCATCCG
GAATTGCTCAAATCTCCGGAGGAGCTGATCCGCACCGTCAAGAGCGAAAGTCTCCCCCTTATTCTGGCCGTGCTGGTTCT
GGCCGTCTGTTACATACTCATGCTTCGTCTGACGGACCGCAACAAGCCGGAAAAAGCCGCAGCGGACACGTCCGCAGAAA
AAGAGCAGTAA

Upstream 100 bases:

>100_bases
TACCTTACCAGCCCCGTTCCCGGGACGCAATAAAAGACTTTCCTTTCAAGGATTTTAATGCAAGATACGCGCCGTTATGC
ATGAGTTGATCTCACTTTGG

Downstream 100 bases:

>100_bases
CCCCCCCTTTTTCCCATGATCCCTTCCAAGGAAGACCGGGCAGCCCGGGCGCTGGAGTATTTCCACCAGGGATATAATTG
TTCCCAATCCGTTTTTGCTG

Product: SNARE associated Golgi protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSWVQDWGYAGVIVLMAMESSIFPVPSEVVIPPAAILSAQEGASMSFWGVVAAGTFGSWLGSAITYAVARIVGRPVIMRW
GKFFFMPPHKVEKAEIFLQRYEVSGVFFARLLPVIRHLISIPAGIVRMGFGIFSLVTVLGSFAWCTVLAWYGHRIGERHP
ELLKSPEELIRTVKSESLPLILAVLVLAVCYILMLRLTDRNKPEKAAADTSAEKEQ

Sequences:

>Translated_216_residues
MSWVQDWGYAGVIVLMAMESSIFPVPSEVVIPPAAILSAQEGASMSFWGVVAAGTFGSWLGSAITYAVARIVGRPVIMRW
GKFFFMPPHKVEKAEIFLQRYEVSGVFFARLLPVIRHLISIPAGIVRMGFGIFSLVTVLGSFAWCTVLAWYGHRIGERHP
ELLKSPEELIRTVKSESLPLILAVLVLAVCYILMLRLTDRNKPEKAAADTSAEKEQ
>Mature_215_residues
SWVQDWGYAGVIVLMAMESSIFPVPSEVVIPPAAILSAQEGASMSFWGVVAAGTFGSWLGSAITYAVARIVGRPVIMRWG
KFFFMPPHKVEKAEIFLQRYEVSGVFFARLLPVIRHLISIPAGIVRMGFGIFSLVTVLGSFAWCTVLAWYGHRIGERHPE
LLKSPEELIRTVKSESLPLILAVLVLAVCYILMLRLTDRNKPEKAAADTSAEKEQ

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23895; Mature: 23763

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWVQDWGYAGVIVLMAMESSIFPVPSEVVIPPAAILSAQEGASMSFWGVVAAGTFGSWL
CCCHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHH
GSAITYAVARIVGRPVIMRWGKFFFMPPHKVEKAEIFLQRYEVSGVFFARLLPVIRHLIS
HHHHHHHHHHHHCCHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPAGIVRMGFGIFSLVTVLGSFAWCTVLAWYGHRIGERHPELLKSPEELIRTVKSESLPL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCCHH
ILAVLVLAVCYILMLRLTDRNKPEKAAADTSAEKEQ
HHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure 
SWVQDWGYAGVIVLMAMESSIFPVPSEVVIPPAAILSAQEGASMSFWGVVAAGTFGSWL
CCHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHH
GSAITYAVARIVGRPVIMRWGKFFFMPPHKVEKAEIFLQRYEVSGVFFARLLPVIRHLIS
HHHHHHHHHHHHCCHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPAGIVRMGFGIFSLVTVLGSFAWCTVLAWYGHRIGERHPELLKSPEELIRTVKSESLPL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCCHH
ILAVLVLAVCYILMLRLTDRNKPEKAAADTSAEKEQ
HHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]