Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736533
Identifier: 187736533
GI number: 187736533
Start: 2500120
End: 2500635
Strand: Direct
Name: 187736533
Synonym: Amuc_2054
Alternate gene names: NA
Gene position: 2500120-2500635 (Clockwise)
Preceding gene: 187736532
Following gene: 187736541
Centisome position: 93.84
GC content: 59.5
Gene sequence:
>516_bases ATGATCCCTTCCAAGGAAGACCGGGCAGCCCGGGCGCTGGAGTATTTCCACCAGGGATATAATTGTTCCCAATCCGTTTT TGCTGCTTTTGCAGATGTCTGCGGCCTGACGGAAGAAACGGCCCTGAAACTGTCCTCTCCCCTGGGGGCAGGCATTGGAC GCATGCGGGAGGTATGCGGCGCTTTTTGCGGAATGAGCATGCTGGCGGGGAGCCTGTACGGAAACAGTTCCCCGGAAACT GGAGAAAAGGAAAAAATCTTTTCCCTGGTCCAATCCCTGGCCGCCTCCTTCAAACAGGAATTCGGCACTCTTTACTGCCG GGAACTGCTGGGGCTGTCTCCGGAGAGCCTGGCAGCGGAAACGGCGCGCCCCGGAGAAAGGACTGCCGCCTATTACGCCT CCCGCCCCTGTGAACGCTGCATTGCCTTCTGCGCCCGCTGCGCGGCCGAGCTGGAAGCAAAAGCCCGGCATCATGAAAAT ACCCGGCCCCCTTTGCAGGGGAACCGGGCGCTTTAA
Upstream 100 bases:
>100_bases CTGTTACATACTCATGCTTCGTCTGACGGACCGCAACAAGCCGGAAAAAGCCGCAGCGGACACGTCCGCAGAAAAAGAGC AGTAACCCCCCCTTTTTCCC
Downstream 100 bases:
>100_bases CCATACGCAAGGCGCCGTCAATGAGAGGCGGAACTGCTGCATGCGCCGTCCGGGCAGGACGCCTTCAGCTTGTCTATCTT TTCATTCGTTTCCCCCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: C_gcaxxg_c_c Family Protein; Redox-Active Protein; Redox Protein; Redox Family Protein
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MIPSKEDRAARALEYFHQGYNCSQSVFAAFADVCGLTEETALKLSSPLGAGIGRMREVCGAFCGMSMLAGSLYGNSSPET GEKEKIFSLVQSLAASFKQEFGTLYCRELLGLSPESLAAETARPGERTAAYYASRPCERCIAFCARCAAELEAKARHHEN TRPPLQGNRAL
Sequences:
>Translated_171_residues MIPSKEDRAARALEYFHQGYNCSQSVFAAFADVCGLTEETALKLSSPLGAGIGRMREVCGAFCGMSMLAGSLYGNSSPET GEKEKIFSLVQSLAASFKQEFGTLYCRELLGLSPESLAAETARPGERTAAYYASRPCERCIAFCARCAAELEAKARHHEN TRPPLQGNRAL >Mature_171_residues MIPSKEDRAARALEYFHQGYNCSQSVFAAFADVCGLTEETALKLSSPLGAGIGRMREVCGAFCGMSMLAGSLYGNSSPET GEKEKIFSLVQSLAASFKQEFGTLYCRELLGLSPESLAAETARPGERTAAYYASRPCERCIAFCARCAAELEAKARHHEN TRPPLQGNRAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18500; Mature: 18500
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPSKEDRAARALEYFHQGYNCSQSVFAAFADVCGLTEETALKLSSPLGAGIGRMREVCG CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHH AFCGMSMLAGSLYGNSSPETGEKEKIFSLVQSLAASFKQEFGTLYCRELLGLSPESLAAE HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH TARPGERTAAYYASRPCERCIAFCARCAAELEAKARHHENTRPPLQGNRAL HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MIPSKEDRAARALEYFHQGYNCSQSVFAAFADVCGLTEETALKLSSPLGAGIGRMREVCG CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHH AFCGMSMLAGSLYGNSSPETGEKEKIFSLVQSLAASFKQEFGTLYCRELLGLSPESLAAE HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH TARPGERTAAYYASRPCERCIAFCARCAAELEAKARHHENTRPPLQGNRAL HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA