| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is ymaB [H]
Identifier: 187736525
GI number: 187736525
Start: 2490691
End: 2491311
Strand: Reverse
Name: ymaB [H]
Synonym: Amuc_2046
Alternate gene names: 187736525
Gene position: 2491311-2490691 (Counterclockwise)
Preceding gene: 187736526
Following gene: 187736518
Centisome position: 93.51
GC content: 57.49
Gene sequence:
>621_bases ATGTCACGTTACCATGGAGAACAGGTTCTGGTGGTTCCCCGCGCCGCCTTTGAGGAAGCGGGTTATTTCCAGGGACACCG GGAAGGCGGGGATCATTATCTGAATGCGTTCATGAAGCCGGGCGTCGCCTCGTTCATGGACCGGGAGGCTGCGGAAAATG ATCCTTCCCACAAACAGATCATCGCCTATGCCATTTTCTGCCACCAGGGCCGCATTCTGCATTACACGCGCGGAGGCTCC GGCGGCGAGGCCCGCCTGCATGACAAGGGCTCCATTGGCATCGGAGGCCATATCAATCCGGTGGACCGCCAATCCGGCCA TGACGACGTTTCCACCTATCTGGCCGGAGTGGAGCGCGAAATCCGCGAGGAACTGGTTATTGACGGGAACTGCACCCAGC GGGTTCTCGGCGTGATTAATGACGATACCAATGACGTGGGGGCCGTGCATCTGGGCATTGTCCACCTGTTTGAGCTGGAT ACGGATCGTGTGCGCGCGAATGAAGCGGCTCTGGCCAATCTCCGTTTTGTTTCTCCGGAGGAATTGTCCGGGGAAATGTT TGAGAAACTGGAGACCTGGTCCCAGCTTGCACTGGAACTGTTTAAAAACAGAGGGGCCTGA
Upstream 100 bases:
>100_bases ATGCGGAGGGGCAGCCCGCGCCTTCCTGAAGGAAGGGGCAAATTTGCCGTTTCAGCGCCTTTTTTGTTGAGCGCGGGATG AAAACGGGTAGGGTGTTTCC
Downstream 100 bases:
>100_bases TCCCCCCGTTCCATGAAAAACGCCCGGGGAGGGGTGGATGCTTTTCCTTTTCTTCTCCGCCGTTTTTCCGCATGGGAAGC CCCCGCCGGCGTTGCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSRYHGEQVLVVPRAAFEEAGYFQGHREGGDHYLNAFMKPGVASFMDREAAENDPSHKQIIAYAIFCHQGRILHYTRGGS GGEARLHDKGSIGIGGHINPVDRQSGHDDVSTYLAGVEREIREELVIDGNCTQRVLGVINDDTNDVGAVHLGIVHLFELD TDRVRANEAALANLRFVSPEELSGEMFEKLETWSQLALELFKNRGA
Sequences:
>Translated_206_residues MSRYHGEQVLVVPRAAFEEAGYFQGHREGGDHYLNAFMKPGVASFMDREAAENDPSHKQIIAYAIFCHQGRILHYTRGGS GGEARLHDKGSIGIGGHINPVDRQSGHDDVSTYLAGVEREIREELVIDGNCTQRVLGVINDDTNDVGAVHLGIVHLFELD TDRVRANEAALANLRFVSPEELSGEMFEKLETWSQLALELFKNRGA >Mature_205_residues SRYHGEQVLVVPRAAFEEAGYFQGHREGGDHYLNAFMKPGVASFMDREAAENDPSHKQIIAYAIFCHQGRILHYTRGGSG GEARLHDKGSIGIGGHINPVDRQSGHDDVSTYLAGVEREIREELVIDGNCTQRVLGVINDDTNDVGAVHLGIVHLFELDT DRVRANEAALANLRFVSPEELSGEMFEKLETWSQLALELFKNRGA
Specific function: Unknown
COG id: COG4112
COG function: function code R; Predicted phosphoesterase (MutT family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000086 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22815; Mature: 22684
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYHGEQVLVVPRAAFEEAGYFQGHREGGDHYLNAFMKPGVASFMDREAAENDPSHKQI CCCCCCCEEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHH IAYAIFCHQGRILHYTRGGSGGEARLHDKGSIGIGGHINPVDRQSGHDDVSTYLAGVERE HHHEEEECCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH IREELVIDGNCTQRVLGVINDDTNDVGAVHLGIVHLFELDTDRVRANEAALANLRFVSPE HHHHHEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHEEEECCHH ELSGEMFEKLETWSQLALELFKNRGA HHCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRYHGEQVLVVPRAAFEEAGYFQGHREGGDHYLNAFMKPGVASFMDREAAENDPSHKQI CCCCCCEEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHH IAYAIFCHQGRILHYTRGGSGGEARLHDKGSIGIGGHINPVDRQSGHDDVSTYLAGVERE HHHEEEECCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH IREELVIDGNCTQRVLGVINDDTNDVGAVHLGIVHLFELDTDRVRANEAALANLRFVSPE HHHHHEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHEEEECCHH ELSGEMFEKLETWSQLALELFKNRGA HHCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 8407798 [H]