Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736526

Identifier: 187736526

GI number: 187736526

Start: 2491411

End: 2491950

Strand: Reverse

Name: 187736526

Synonym: Amuc_2047

Alternate gene names: NA

Gene position: 2491950-2491411 (Counterclockwise)

Preceding gene: 187736531

Following gene: 187736525

Centisome position: 93.54

GC content: 55.74

Gene sequence:

>540_bases
ATGATGCAGGATTCAGAAGTCATCAAACTCGTCAAGCCCGTACCTTCCGACCGCCTGGCAACCCAGGTGCTGGTGGCATG
GTACCATGCGGTGCGCCCCAGGTGGAAAAAGCCGCTGGACCTGGCCATTACGGCCTTTTTTGTATTGATGTCGCTGTATT
CCTTTTCCCTGCGCCCACTGCCCTTATTCGCCTGGCTGTCCCTGGCCGGGGCGCTGATGGCGATTATCCTGTCCTGGTTT
TACGTCCCCTTTCTGGCAAAGGCCGCTCTGGCCGCCAATAAAAAGGTGCCCATGTACCATCAGGAAAAGGATTACGTTTT
TCATGAGGATTACCTGACGTTCTCCAGCAAGGGCGTTGCCCCCATGAATATTCCCTACGACCGTTTTTCCACGTTGTGCA
GGACGCGCCACGCGCTGCTGTTCCTGTTCGGCAAGAAGCTGGTGCTGTGGCTGCCGCTCCATCTCATGGATGTGGAACAG
CTGGAAAGCATCATGCGCAGGTTCCGGAATCATGGCGTGGAAGTGAAGGATGTCTCCTGA

Upstream 100 bases:

>100_bases
GGGGAAGAGACCTTTCCGGAGGGGCTTTTTTGACACAATGGCGGCGGAAGAGCCTGCTTTTAGGCTTTTTCTTCAGCGGG
AATGAAGATACCCTGCCGCC

Downstream 100 bases:

>100_bases
TGCGGAGGGGCAGCCCGCGCCTTCCTGAAGGAAGGGGCAAATTTGCCGTTTCAGCGCCTTTTTTGTTGAGCGCGGGATGA
AAACGGGTAGGGTGTTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MMQDSEVIKLVKPVPSDRLATQVLVAWYHAVRPRWKKPLDLAITAFFVLMSLYSFSLRPLPLFAWLSLAGALMAIILSWF
YVPFLAKAALAANKKVPMYHQEKDYVFHEDYLTFSSKGVAPMNIPYDRFSTLCRTRHALLFLFGKKLVLWLPLHLMDVEQ
LESIMRRFRNHGVEVKDVS

Sequences:

>Translated_179_residues
MMQDSEVIKLVKPVPSDRLATQVLVAWYHAVRPRWKKPLDLAITAFFVLMSLYSFSLRPLPLFAWLSLAGALMAIILSWF
YVPFLAKAALAANKKVPMYHQEKDYVFHEDYLTFSSKGVAPMNIPYDRFSTLCRTRHALLFLFGKKLVLWLPLHLMDVEQ
LESIMRRFRNHGVEVKDVS
>Mature_179_residues
MMQDSEVIKLVKPVPSDRLATQVLVAWYHAVRPRWKKPLDLAITAFFVLMSLYSFSLRPLPLFAWLSLAGALMAIILSWF
YVPFLAKAALAANKKVPMYHQEKDYVFHEDYLTFSSKGVAPMNIPYDRFSTLCRTRHALLFLFGKKLVLWLPLHLMDVEQ
LESIMRRFRNHGVEVKDVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20788; Mature: 20788

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQDSEVIKLVKPVPSDRLATQVLVAWYHAVRPRWKKPLDLAITAFFVLMSLYSFSLRPL
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCH
PLFAWLSLAGALMAIILSWFYVPFLAKAALAANKKVPMYHQEKDYVFHEDYLTFSSKGVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHEECCCCCC
PMNIPYDRFSTLCRTRHALLFLFGKKLVLWLPLHLMDVEQLESIMRRFRNHGVEVKDVS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure
MMQDSEVIKLVKPVPSDRLATQVLVAWYHAVRPRWKKPLDLAITAFFVLMSLYSFSLRPL
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCH
PLFAWLSLAGALMAIILSWFYVPFLAKAALAANKKVPMYHQEKDYVFHEDYLTFSSKGVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHEECCCCCC
PMNIPYDRFSTLCRTRHALLFLFGKKLVLWLPLHLMDVEQLESIMRRFRNHGVEVKDVS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA