| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187736526
Identifier: 187736526
GI number: 187736526
Start: 2491411
End: 2491950
Strand: Reverse
Name: 187736526
Synonym: Amuc_2047
Alternate gene names: NA
Gene position: 2491950-2491411 (Counterclockwise)
Preceding gene: 187736531
Following gene: 187736525
Centisome position: 93.54
GC content: 55.74
Gene sequence:
>540_bases ATGATGCAGGATTCAGAAGTCATCAAACTCGTCAAGCCCGTACCTTCCGACCGCCTGGCAACCCAGGTGCTGGTGGCATG GTACCATGCGGTGCGCCCCAGGTGGAAAAAGCCGCTGGACCTGGCCATTACGGCCTTTTTTGTATTGATGTCGCTGTATT CCTTTTCCCTGCGCCCACTGCCCTTATTCGCCTGGCTGTCCCTGGCCGGGGCGCTGATGGCGATTATCCTGTCCTGGTTT TACGTCCCCTTTCTGGCAAAGGCCGCTCTGGCCGCCAATAAAAAGGTGCCCATGTACCATCAGGAAAAGGATTACGTTTT TCATGAGGATTACCTGACGTTCTCCAGCAAGGGCGTTGCCCCCATGAATATTCCCTACGACCGTTTTTCCACGTTGTGCA GGACGCGCCACGCGCTGCTGTTCCTGTTCGGCAAGAAGCTGGTGCTGTGGCTGCCGCTCCATCTCATGGATGTGGAACAG CTGGAAAGCATCATGCGCAGGTTCCGGAATCATGGCGTGGAAGTGAAGGATGTCTCCTGA
Upstream 100 bases:
>100_bases GGGGAAGAGACCTTTCCGGAGGGGCTTTTTTGACACAATGGCGGCGGAAGAGCCTGCTTTTAGGCTTTTTCTTCAGCGGG AATGAAGATACCCTGCCGCC
Downstream 100 bases:
>100_bases TGCGGAGGGGCAGCCCGCGCCTTCCTGAAGGAAGGGGCAAATTTGCCGTTTCAGCGCCTTTTTTGTTGAGCGCGGGATGA AAACGGGTAGGGTGTTTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MMQDSEVIKLVKPVPSDRLATQVLVAWYHAVRPRWKKPLDLAITAFFVLMSLYSFSLRPLPLFAWLSLAGALMAIILSWF YVPFLAKAALAANKKVPMYHQEKDYVFHEDYLTFSSKGVAPMNIPYDRFSTLCRTRHALLFLFGKKLVLWLPLHLMDVEQ LESIMRRFRNHGVEVKDVS
Sequences:
>Translated_179_residues MMQDSEVIKLVKPVPSDRLATQVLVAWYHAVRPRWKKPLDLAITAFFVLMSLYSFSLRPLPLFAWLSLAGALMAIILSWF YVPFLAKAALAANKKVPMYHQEKDYVFHEDYLTFSSKGVAPMNIPYDRFSTLCRTRHALLFLFGKKLVLWLPLHLMDVEQ LESIMRRFRNHGVEVKDVS >Mature_179_residues MMQDSEVIKLVKPVPSDRLATQVLVAWYHAVRPRWKKPLDLAITAFFVLMSLYSFSLRPLPLFAWLSLAGALMAIILSWF YVPFLAKAALAANKKVPMYHQEKDYVFHEDYLTFSSKGVAPMNIPYDRFSTLCRTRHALLFLFGKKLVLWLPLHLMDVEQ LESIMRRFRNHGVEVKDVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20788; Mature: 20788
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQDSEVIKLVKPVPSDRLATQVLVAWYHAVRPRWKKPLDLAITAFFVLMSLYSFSLRPL CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCH PLFAWLSLAGALMAIILSWFYVPFLAKAALAANKKVPMYHQEKDYVFHEDYLTFSSKGVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHEECCCCCC PMNIPYDRFSTLCRTRHALLFLFGKKLVLWLPLHLMDVEQLESIMRRFRNHGVEVKDVS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECC >Mature Secondary Structure MMQDSEVIKLVKPVPSDRLATQVLVAWYHAVRPRWKKPLDLAITAFFVLMSLYSFSLRPL CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCH PLFAWLSLAGALMAIILSWFYVPFLAKAALAANKKVPMYHQEKDYVFHEDYLTFSSKGVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHEECCCCCC PMNIPYDRFSTLCRTRHALLFLFGKKLVLWLPLHLMDVEQLESIMRRFRNHGVEVKDVS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA