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The map label for this gene is alr [H]

Identifier: 187736490

GI number: 187736490

Start: 2443943

End: 2445049

Strand: Direct

Name: alr [H]

Synonym: Amuc_2011

Alternate gene names: 187736490

Gene position: 2443943-2445049 (Clockwise)

Preceding gene: 187736485

Following gene: 187736491

Centisome position: 91.74

GC content: 63.41

Gene sequence:

>1107_bases
ATGCCAGCAACCAGCCCTCCCCGCGCCTGGGCCGAAATCGACCTTGGGGCCATCCGCCATAACCTGAATGTCGTCAAACA
GGCGGCCAAAGGGGAATATTACATGCCCGTCGTGAAGGCCGGCGCCTATGGCCACGGCCTGGAACAGGTTTGCCGCACGC
TGGATTCGGAAGGCATCGCTTTCTTCGGGGTGGCCAATGTGGGAGAAGCCCGGCGCATCAGCCAGGCGGGCTGCCGCACC
CGCCCTTACATCCTGGGCCCCGCGTTCCCGGAGGAACGGGAGGAAATCGTGCTGAACGGCTGGCGCTCCTTCATTTCCAC
CATGGAGGAAGCCGCGCATTACAATTCCCTGGCGCGGCTGTACGGAAAGACGCTGCCCATCCACCTTTCCGTGGATACGG
GAATGGGCCGCGGCGGATTCCTGCCGGACCAGCTTGAAGAACTGCTTTCCCGCCTGGGAGAACTGGACAGCCTGCATCTG
GAAGGCCTGGGCGCTCACCTTCCCTGCGCGGACGAGGACCGGGAGATTACGCTCAGGCAAATCTCCCGCTTTGAACAGAT
GGCCGCCCGCATCCGGGAAAAACTGCCTTTGAAGTACTGCCACCTGGCCAACAGCGCCGCCTCCCTGGATTATGAAATTC
CCTCCAACAACATGTGCCGCCCCGGCCTGGTGCTGTACGGTTTTTCCCCCATTCCCTCCCCATGGGCCGCGCAATTGAAG
CCGGCCATGGCCCTTTTTTCCCGCCTGACGGTGGTGCGCACGCTGCCGGAAGGCCACGGCATTTCCTACGGGGGTACCTT
TGTGACGGACCACCCCACCAGGGTGGCGACCGTAGGCATAGGCTATGCGGACGGCTACCTGCGTTCCCTGGCCCACAAGG
GCGCCCGCGTCATGGTGGACGGCGTTTCCTGCCCCCTTCTCGGGCGCGTGACGATGGACCAGATCATGGTGGACGTCAGC
CGGGCGCCGCACGCGGAACCGGGCATGACCGCAGAAATCATGGGGCCGCATATCCCCGTGACGGAACTGGCGGAAAAGGC
CGGCACCATTTCCTGGGAGATTTTTACCGGAATAGGCCCCCGGGTACCCCGCCACTACACCCACTAA

Upstream 100 bases:

>100_bases
AAAAATCCGTCTGGAATTGCGCGGCCAAAGGCGGACAATCCCCTGCGCCGGGAGCGTCCGTCGCCCCTCTTTTTTTCAAC
CTTTCCGCCATTCTCCAACC

Downstream 100 bases:

>100_bases
ACCAGGCAGGAGGGAAAAGGGCCAAGCCGGCCGCCCATTTCTGGGGGCTTCTTTCCCGATTGACGGACAGACAGAAATAT
CGTTTAGTTAGCCAGTATGA

Product: alanine racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MPATSPPRAWAEIDLGAIRHNLNVVKQAAKGEYYMPVVKAGAYGHGLEQVCRTLDSEGIAFFGVANVGEARRISQAGCRT
RPYILGPAFPEEREEIVLNGWRSFISTMEEAAHYNSLARLYGKTLPIHLSVDTGMGRGGFLPDQLEELLSRLGELDSLHL
EGLGAHLPCADEDREITLRQISRFEQMAARIREKLPLKYCHLANSAASLDYEIPSNNMCRPGLVLYGFSPIPSPWAAQLK
PAMALFSRLTVVRTLPEGHGISYGGTFVTDHPTRVATVGIGYADGYLRSLAHKGARVMVDGVSCPLLGRVTMDQIMVDVS
RAPHAEPGMTAEIMGPHIPVTELAEKAGTISWEIFTGIGPRVPRHYTH

Sequences:

>Translated_368_residues
MPATSPPRAWAEIDLGAIRHNLNVVKQAAKGEYYMPVVKAGAYGHGLEQVCRTLDSEGIAFFGVANVGEARRISQAGCRT
RPYILGPAFPEEREEIVLNGWRSFISTMEEAAHYNSLARLYGKTLPIHLSVDTGMGRGGFLPDQLEELLSRLGELDSLHL
EGLGAHLPCADEDREITLRQISRFEQMAARIREKLPLKYCHLANSAASLDYEIPSNNMCRPGLVLYGFSPIPSPWAAQLK
PAMALFSRLTVVRTLPEGHGISYGGTFVTDHPTRVATVGIGYADGYLRSLAHKGARVMVDGVSCPLLGRVTMDQIMVDVS
RAPHAEPGMTAEIMGPHIPVTELAEKAGTISWEIFTGIGPRVPRHYTH
>Mature_367_residues
PATSPPRAWAEIDLGAIRHNLNVVKQAAKGEYYMPVVKAGAYGHGLEQVCRTLDSEGIAFFGVANVGEARRISQAGCRTR
PYILGPAFPEEREEIVLNGWRSFISTMEEAAHYNSLARLYGKTLPIHLSVDTGMGRGGFLPDQLEELLSRLGELDSLHLE
GLGAHLPCADEDREITLRQISRFEQMAARIREKLPLKYCHLANSAASLDYEIPSNNMCRPGLVLYGFSPIPSPWAAQLKP
AMALFSRLTVVRTLPEGHGISYGGTFVTDHPTRVATVGIGYADGYLRSLAHKGARVMVDGVSCPLLGRVTMDQIMVDVSR
APHAEPGMTAEIMGPHIPVTELAEKAGTISWEIFTGIGPRVPRHYTH

Specific function: Provides the D-alanine required for cell wall biosynthesis [H]

COG id: COG0787

COG function: function code M; Alanine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alanine racemase family [H]

Homologues:

Organism=Escherichia coli, GI1787439, Length=359, Percent_Identity=32.8690807799443, Blast_Score=154, Evalue=6e-39,
Organism=Escherichia coli, GI1790487, Length=363, Percent_Identity=31.9559228650138, Blast_Score=149, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000821
- InterPro:   IPR009006
- InterPro:   IPR011079
- InterPro:   IPR001608
- InterPro:   IPR020622 [H]

Pfam domain/function: PF00842 Ala_racemase_C; PF01168 Ala_racemase_N [H]

EC number: =5.1.1.1 [H]

Molecular weight: Translated: 40249; Mature: 40118

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATSPPRAWAEIDLGAIRHNLNVVKQAAKGEYYMPVVKAGAYGHGLEQVCRTLDSEGIA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHEECCCCCCCCHHHHHHHHCCCCEE
FFGVANVGEARRISQAGCRTRPYILGPAFPEEREEIVLNGWRSFISTMEEAAHYNSLARL
EEEECCCCHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGKTLPIHLSVDTGMGRGGFLPDQLEELLSRLGELDSLHLEGLGAHLPCADEDREITLRQ
HCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCHHHHHH
ISRFEQMAARIREKLPLKYCHLANSAASLDYEIPSNNMCRPGLVLYGFSPIPSPWAAQLK
HHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCHHHHHH
PAMALFSRLTVVRTLPEGHGISYGGTFVTDHPTRVATVGIGYADGYLRSLAHKGARVMVD
HHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHCCCEEEEE
GVSCPLLGRVTMDQIMVDVSRAPHAEPGMTAEIMGPHIPVTELAEKAGTISWEIFTGIGP
CCCCCEECHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHCCEEEEEEECCCC
RVPRHYTH
CCCCCCCC
>Mature Secondary Structure 
PATSPPRAWAEIDLGAIRHNLNVVKQAAKGEYYMPVVKAGAYGHGLEQVCRTLDSEGIA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHEECCCCCCCCHHHHHHHHCCCCEE
FFGVANVGEARRISQAGCRTRPYILGPAFPEEREEIVLNGWRSFISTMEEAAHYNSLARL
EEEECCCCHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGKTLPIHLSVDTGMGRGGFLPDQLEELLSRLGELDSLHLEGLGAHLPCADEDREITLRQ
HCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCHHHHHH
ISRFEQMAARIREKLPLKYCHLANSAASLDYEIPSNNMCRPGLVLYGFSPIPSPWAAQLK
HHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCHHHHHH
PAMALFSRLTVVRTLPEGHGISYGGTFVTDHPTRVATVGIGYADGYLRSLAHKGARVMVD
HHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHCCCEEEEE
GVSCPLLGRVTMDQIMVDVSRAPHAEPGMTAEIMGPHIPVTELAEKAGTISWEIFTGIGP
CCCCCEECHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHCCEEEEEEECCCC
RVPRHYTH
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA