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The map label for this gene is rrf2 [H]

Identifier: 187736491

GI number: 187736491

Start: 2445146

End: 2445589

Strand: Direct

Name: rrf2 [H]

Synonym: Amuc_2012

Alternate gene names: 187736491

Gene position: 2445146-2445589 (Clockwise)

Preceding gene: 187736490

Following gene: 187736492

Centisome position: 91.78

GC content: 57.43

Gene sequence:

>444_bases
ATGATGAAGGTTTCCACCAGAGGACGTTACGCGCTGCGCCTGATGATTGACCTCGCCCAGCACCGCGACGAGGGTTACAT
CTCCCTGAAGGAGATTTCCGCCAGGCAGGACGTTACCGTACGTTATCTGGAACAGATTATCGCCATCCTTTTGAAAGCGG
GATTCGTCCAGAGCTTCCGGGGAAAGGCCGGCGGATACCGCCTTTCCAGGCATCCGCGCGAATATACTACGGAAGATATC
CTGAAACTGACGGAAGGCTCCCTCCTGCCCCTTTCCTGCACGGCTTCCCACGAGAATCCGTGCCCGCGGGCGGCCGGCTG
CGCCACGCTGCCTTTCTGGCGCGGGCTGCAACAAGTCATTGAGAATTATTTGCGTCGCGTAACGCTGGAAGATCTGGCCG
AACAGCAGAAGGAAATCGGCTGCGACTACGGAGCAGGTATTTAA

Upstream 100 bases:

>100_bases
CTAAACCAGGCAGGAGGGAAAAGGGCCAAGCCGGCCGCCCATTTCTGGGGGCTTCTTTCCCGATTGACGGACAGACAGAA
ATATCGTTTAGTTAGCCAGT

Downstream 100 bases:

>100_bases
GCAGCGGCCGCGGGCCTGAACATTTCCCTTTCCTTTCCCATTCCGGCCCATGTCCCGTTTTTTTTACCCGGAGCTTGACA
TTTGCTTTCCTTTTCATTAT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MMKVSTRGRYALRLMIDLAQHRDEGYISLKEISARQDVTVRYLEQIIAILLKAGFVQSFRGKAGGYRLSRHPREYTTEDI
LKLTEGSLLPLSCTASHENPCPRAAGCATLPFWRGLQQVIENYLRRVTLEDLAEQQKEIGCDYGAGI

Sequences:

>Translated_147_residues
MMKVSTRGRYALRLMIDLAQHRDEGYISLKEISARQDVTVRYLEQIIAILLKAGFVQSFRGKAGGYRLSRHPREYTTEDI
LKLTEGSLLPLSCTASHENPCPRAAGCATLPFWRGLQQVIENYLRRVTLEDLAEQQKEIGCDYGAGI
>Mature_147_residues
MMKVSTRGRYALRLMIDLAQHRDEGYISLKEISARQDVTVRYLEQIIAILLKAGFVQSFRGKAGGYRLSRHPREYTTEDI
LKLTEGSLLPLSCTASHENPCPRAAGCATLPFWRGLQQVIENYLRRVTLEDLAEQQKEIGCDYGAGI

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=136, Percent_Identity=30.1470588235294, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16617; Mature: 16617

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKVSTRGRYALRLMIDLAQHRDEGYISLKEISARQDVTVRYLEQIIAILLKAGFVQSFR
CCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GKAGGYRLSRHPREYTTEDILKLTEGSLLPLSCTASHENPCPRAAGCATLPFWRGLQQVI
CCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
ENYLRRVTLEDLAEQQKEIGCDYGAGI
HHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MMKVSTRGRYALRLMIDLAQHRDEGYISLKEISARQDVTVRYLEQIIAILLKAGFVQSFR
CCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GKAGGYRLSRHPREYTTEDILKLTEGSLLPLSCTASHENPCPRAAGCATLPFWRGLQQVI
CCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
ENYLRRVTLEDLAEQQKEIGCDYGAGI
HHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8335628 [H]