| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187736462
Identifier: 187736462
GI number: 187736462
Start: 2405050
End: 2405754
Strand: Reverse
Name: 187736462
Synonym: Amuc_1982
Alternate gene names: NA
Gene position: 2405754-2405050 (Counterclockwise)
Preceding gene: 187736463
Following gene: 187736461
Centisome position: 90.3
GC content: 53.19
Gene sequence:
>705_bases ATGAGAAGAATCGCCTCTATTTCCATGTTGGCTGTGGTATCCGCGCTTTCCGCGAGTGCTGCTACTGTATTATTTGATTT TAACAGTTCTTTGCTTCCGGAAACTCCCGCCAAGACTGTTTCTGTAACCGATTCCGGTTCCGGATTTGTTGCAACCCTGG CTACGGCAGCCTCTTCCGCTAATCTGGGTTCTACTTCTTCCGCCGCTTCTGGGGACTGGGTTTCCTCCGGAACTTCTTTT GATACACAGGGATTGGATTCTTTTATGGAAAACCAGATCTCTTTCGGAAACTCTTGGCAGACCTTTATCTCCGGCCCCAA AGGAGCTTCTCTTTCCCTGACTATTTCCGGTCTGGTGGCTGGTGCTTCCTACCAGATTGCCCTTGTTACCGGGTGTCCTT TTGAGGGGGCCGGTGCCTGGAATTCCCTGGTGACTTCCAATACCTACGACAGCGCGGCTCCTTCCATAGGTGCGAACTCT CAGACAATTCAGGCCCGGACTCCCACGGGGTACACCATTAGTGACGTTATTGCCAATGAAGATGGCGAAATTATTCTGAC GGTGAATACTCCGGGTTCCTCCCACACGCCTACGTTCAATGCTCTGGCTATTTCTGGAGAAACAGCCAGCGTTCCGGAAC CGGCCACGGCGTCCCTGAGTCTGCTGGGGCTGACGGCCCTGATGGCTCGCCGCCGAAGAGCTTGA
Upstream 100 bases:
>100_bases TGTTCCGTCCGCATAACCCCCTCTTTTTTTTAAAAAATAATTTGACACCGGATAGTCAATCCGTTACTGACTGAAATCAG TTGCTGTTTACCTGCTATTT
Downstream 100 bases:
>100_bases GAACCTCTTTTCCGGCAGTAAAAAATGTTGTTGCCTGCAAGGTCTAGCCTTGCAGGCGATTTTTTTAATGTCTCTGTTGA TGAAGGAGGGCCGTCCGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MRRIASISMLAVVSALSASAATVLFDFNSSLLPETPAKTVSVTDSGSGFVATLATAASSANLGSTSSAASGDWVSSGTSF DTQGLDSFMENQISFGNSWQTFISGPKGASLSLTISGLVAGASYQIALVTGCPFEGAGAWNSLVTSNTYDSAAPSIGANS QTIQARTPTGYTISDVIANEDGEIILTVNTPGSSHTPTFNALAISGETASVPEPATASLSLLGLTALMARRRRA
Sequences:
>Translated_234_residues MRRIASISMLAVVSALSASAATVLFDFNSSLLPETPAKTVSVTDSGSGFVATLATAASSANLGSTSSAASGDWVSSGTSF DTQGLDSFMENQISFGNSWQTFISGPKGASLSLTISGLVAGASYQIALVTGCPFEGAGAWNSLVTSNTYDSAAPSIGANS QTIQARTPTGYTISDVIANEDGEIILTVNTPGSSHTPTFNALAISGETASVPEPATASLSLLGLTALMARRRRA >Mature_234_residues MRRIASISMLAVVSALSASAATVLFDFNSSLLPETPAKTVSVTDSGSGFVATLATAASSANLGSTSSAASGDWVSSGTSF DTQGLDSFMENQISFGNSWQTFISGPKGASLSLTISGLVAGASYQIALVTGCPFEGAGAWNSLVTSNTYDSAAPSIGANS QTIQARTPTGYTISDVIANEDGEIILTVNTPGSSHTPTFNALAISGETASVPEPATASLSLLGLTALMARRRRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23644; Mature: 23644
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRIASISMLAVVSALSASAATVLFDFNSSLLPETPAKTVSVTDSGSGFVATLATAASSA CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEHHHCCC NLGSTSSAASGDWVSSGTSFDTQGLDSFMENQISFGNSWQTFISGPKGASLSLTISGLVA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEEEEEE GASYQIALVTGCPFEGAGAWNSLVTSNTYDSAAPSIGANSQTIQARTPTGYTISDVIANE CCCEEEEEEECCCCCCCCCCHHHEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHEEECC DGEIILTVNTPGSSHTPTFNALAISGETASVPEPATASLSLLGLTALMARRRRA CCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRRIASISMLAVVSALSASAATVLFDFNSSLLPETPAKTVSVTDSGSGFVATLATAASSA CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEHHHCCC NLGSTSSAASGDWVSSGTSFDTQGLDSFMENQISFGNSWQTFISGPKGASLSLTISGLVA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEEEEEE GASYQIALVTGCPFEGAGAWNSLVTSNTYDSAAPSIGANSQTIQARTPTGYTISDVIANE CCCEEEEEEECCCCCCCCCCHHHEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHEEECC DGEIILTVNTPGSSHTPTFNALAISGETASVPEPATASLSLLGLTALMARRRRA CCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA