Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is aat
Identifier: 187736455
GI number: 187736455
Start: 2395373
End: 2395954
Strand: Direct
Name: aat
Synonym: Amuc_1973
Alternate gene names: 187736455
Gene position: 2395373-2395954 (Clockwise)
Preceding gene: 187736454
Following gene: 187736465
Centisome position: 89.91
GC content: 56.53
Gene sequence:
>582_bases ATGAATGACAGATTGACGCCGGAACTTGTCCTCTCCGCCTATTGCCAGGGGTGTTTTCCCATGGCGGACCCGGAAACGGG AGAAATCTCCTTTTACGAACCGGACCCGCGCGCCCTGATTCCGCTGGACGACCGCTTCCACATCCCCCACGGCCTCAAAC GGGCTTTGAATAAAAAACCCTTTGAACTCCGGATGGATACCGCTTTTCCGGAGGTGGTCCATGCCTGCGCCCGGACGGAC CAGCCGGAAGAACAATGGATAGACGGACAGATTGAAGAAGCATACGGCAAGCTTCACGAGATGGGCTTCGCCCACAGTGT GGAATGCTGGGACGAGGAAGGGCTGCAGGGAGGACTGTACGGAGTAGCCCTGGGGAAGGCTTTTTTCGGGGAAAGCATGT TCCACCGGAAAACGGACGCCAGCAAGATCGCCCTGGTGGCTCTGGTGCAATACCTACGGGCGCATCGGTTCCTTTTTCTG GATACCCAGTGGACTACGCCGCATCTGCTGAAATTCGGAACCTATGAAGTGCCGGCCAAGGAATACCGGAAGCTTCTGAA GAGGGCACTGGAGGAACAATAA
Upstream 100 bases:
>100_bases AATTCGTGCCGTTGGACAAAATCCACGGGCTGCCCATGGCCTCACCGGACCGCAAGGCACTGAACTCCCCCACCCTCGGC AAACTGCTGGACCATATCAG
Downstream 100 bases:
>100_bases ACTATATTTTACTGTCCGGTGTAAACGGTCATGAGATTGATTCCCAATTATGGGAGATCCGACAGCGCACCGGATTTCAT AACCTGCTGATGATTTTTCT
Product: leucyl/phenylalanyl-tRNA/protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MNDRLTPELVLSAYCQGCFPMADPETGEISFYEPDPRALIPLDDRFHIPHGLKRALNKKPFELRMDTAFPEVVHACARTD QPEEQWIDGQIEEAYGKLHEMGFAHSVECWDEEGLQGGLYGVALGKAFFGESMFHRKTDASKIALVALVQYLRAHRFLFL DTQWTTPHLLKFGTYEVPAKEYRKLLKRALEEQ
Sequences:
>Translated_193_residues MNDRLTPELVLSAYCQGCFPMADPETGEISFYEPDPRALIPLDDRFHIPHGLKRALNKKPFELRMDTAFPEVVHACARTD QPEEQWIDGQIEEAYGKLHEMGFAHSVECWDEEGLQGGLYGVALGKAFFGESMFHRKTDASKIALVALVQYLRAHRFLFL DTQWTTPHLLKFGTYEVPAKEYRKLLKRALEEQ >Mature_193_residues MNDRLTPELVLSAYCQGCFPMADPETGEISFYEPDPRALIPLDDRFHIPHGLKRALNKKPFELRMDTAFPEVVHACARTD QPEEQWIDGQIEEAYGKLHEMGFAHSVECWDEEGLQGGLYGVALGKAFFGESMFHRKTDASKIALVALVQYLRAHRFLFL DTQWTTPHLLKFGTYEVPAKEYRKLLKRALEEQ
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family
Homologues:
Organism=Escherichia coli, GI1787111, Length=184, Percent_Identity=39.1304347826087, Blast_Score=134, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LFTR_AKKM8 (B2UNS0)
Other databases:
- EMBL: CP001071 - RefSeq: YP_001878567.1 - ProteinModelPortal: B2UNS0 - SMR: B2UNS0 - GeneID: 6274891 - GenomeReviews: CP001071_GR - KEGG: amu:Amuc_1973 - HOGENOM: HBG485363 - OMA: GEPILWW - GO: GO:0005737 - HAMAP: MF_00688 - InterPro: IPR016181 - InterPro: IPR004616 - TIGRFAMs: TIGR00667
Pfam domain/function: PF03588 Leu_Phe_trans; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.6
Molecular weight: Translated: 22174; Mature: 22174
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDRLTPELVLSAYCQGCFPMADPETGEISFYEPDPRALIPLDDRFHIPHGLKRALNKKP CCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCHHHHHHHCCCC FELRMDTAFPEVVHACARTDQPEEQWIDGQIEEAYGKLHEMGFAHSVECWDEEGLQGGLY CEEEECHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH GVALGKAFFGESMFHRKTDASKIALVALVQYLRAHRFLFLDTQWTTPHLLKFGTYEVPAK HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHCCCCCCCHH EYRKLLKRALEEQ HHHHHHHHHHHCC >Mature Secondary Structure MNDRLTPELVLSAYCQGCFPMADPETGEISFYEPDPRALIPLDDRFHIPHGLKRALNKKP CCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCHHHHHHHCCCC FELRMDTAFPEVVHACARTDQPEEQWIDGQIEEAYGKLHEMGFAHSVECWDEEGLQGGLY CEEEECHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH GVALGKAFFGESMFHRKTDASKIALVALVQYLRAHRFLFLDTQWTTPHLLKFGTYEVPAK HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHCCCCCCCHH EYRKLLKRALEEQ HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA