Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736430
Identifier: 187736430
GI number: 187736430
Start: 2366548
End: 2367162
Strand: Reverse
Name: 187736430
Synonym: Amuc_1948
Alternate gene names: NA
Gene position: 2367162-2366548 (Counterclockwise)
Preceding gene: 187736431
Following gene: 187736424
Centisome position: 88.85
GC content: 58.54
Gene sequence:
>615_bases ATGTGCCGTTTGATTTTTGAAACCGTTAAATGGGAGAATGGCGCTCCCTGTCTGCTTCCCTGGCACCAGCGGAGGATGGA GGCCGCCATCGGCGTTCATGGTTCGGACGGAGCTTCCGTCCCCGATCTGGCTTCCGTTCTTTCGGACTGTCCCGGCCCGG AGGGCCGTGGTGTTTACAAATGCCATATCACGTATGATACGCGGGGAAGGGTGCGCCGCACCTCCTTTGAGCCCTACCGT CCCCGGCAGGTGAAGACGCTGACGTGTGTGGAAATGCCCGGGCTGGATTACTCATGCAAGTGGGAGGATCGGACAGGGCT TCTGGCGGCAGGGGCGGCGTTGGGCTGTGACGAAGAAGCGCTGATTCTCCGGAACGGGATGGTGACGGATACGCGGTACA GCAACGTGGTGTTCGGGGACGGGTCTTTCTGGGTTACTCCGGAAACTTTCCTGCTCCCGGGAACCAAGCGCGCCTTCCTG CTGTCCCGCGGAGACATTCAGGAATGTTCCGTAAGAGCGGAAGATATAGGCAAATTCCGCTTCTGTTCCCTGATTAATTC CATGCTGGATCCCGGCGATGTGGTGGTGCGGACGGAGGATATTATCCTGTGTTGA
Upstream 100 bases:
>100_bases ATGGAGGAGGATGAACGGGGAATGGTATACAAGAGCGGTGGAGGAATTACCGTCATGAGCCGGATGGAAGAGGAATACCA GGAAGCTGTTGCCAAAGTTT
Downstream 100 bases:
>100_bases GGGTGGAAAACGGATAGATTGTTTTATCCGGAACCCTCTGAATTTTGGTATTGAGGGCATAAAAAAGCGGCCGTTCCATG GATATGGAATGACCGCCTGA
Product: hypothetical protein
Products: 4-aminobenzoate; pyruvate
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MCRLIFETVKWENGAPCLLPWHQRRMEAAIGVHGSDGASVPDLASVLSDCPGPEGRGVYKCHITYDTRGRVRRTSFEPYR PRQVKTLTCVEMPGLDYSCKWEDRTGLLAAGAALGCDEEALILRNGMVTDTRYSNVVFGDGSFWVTPETFLLPGTKRAFL LSRGDIQECSVRAEDIGKFRFCSLINSMLDPGDVVVRTEDIILC
Sequences:
>Translated_204_residues MCRLIFETVKWENGAPCLLPWHQRRMEAAIGVHGSDGASVPDLASVLSDCPGPEGRGVYKCHITYDTRGRVRRTSFEPYR PRQVKTLTCVEMPGLDYSCKWEDRTGLLAAGAALGCDEEALILRNGMVTDTRYSNVVFGDGSFWVTPETFLLPGTKRAFL LSRGDIQECSVRAEDIGKFRFCSLINSMLDPGDVVVRTEDIILC >Mature_204_residues MCRLIFETVKWENGAPCLLPWHQRRMEAAIGVHGSDGASVPDLASVLSDCPGPEGRGVYKCHITYDTRGRVRRTSFEPYR PRQVKTLTCVEMPGLDYSCKWEDRTGLLAAGAALGCDEEALILRNGMVTDTRYSNVVFGDGSFWVTPETFLLPGTKRAFL LSRGDIQECSVRAEDIGKFRFCSLINSMLDPGDVVVRTEDIILC
Specific function: Unknown
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: 4.1.3.38
Molecular weight: Translated: 22685; Mature: 22685
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRLIFETVKWENGAPCLLPWHQRRMEAAIGVHGSDGASVPDLASVLSDCPGPEGRGVYK CCEEEEEEECCCCCCCEEECHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCCCCCEEE CHITYDTRGRVRRTSFEPYRPRQVKTLTCVEMPGLDYSCKWEDRTGLLAAGAALGCDEEA EEEEECCCCCEEECCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCEEEECCCCCCCCCE LILRNGMVTDTRYSNVVFGDGSFWVTPETFLLPGTKRAFLLSRGDIQECSVRAEDIGKFR EEEECCEEECCCCCEEEEECCCEEECCCEEEECCCCEEEEEECCCHHHHEECHHHCCHHH FCSLINSMLDPGDVVVRTEDIILC HHHHHHHHCCCCCEEEEECEEEEC >Mature Secondary Structure MCRLIFETVKWENGAPCLLPWHQRRMEAAIGVHGSDGASVPDLASVLSDCPGPEGRGVYK CCEEEEEEECCCCCCCEEECHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCCCCCEEE CHITYDTRGRVRRTSFEPYRPRQVKTLTCVEMPGLDYSCKWEDRTGLLAAGAALGCDEEA EEEEECCCCCEEECCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCEEEECCCCCCCCCE LILRNGMVTDTRYSNVVFGDGSFWVTPETFLLPGTKRAFLLSRGDIQECSVRAEDIGKFR EEEECCEEECCCCCEEEEECCCEEECCCEEEECCCCEEEEEECCCHHHHEECHHHCCHHH FCSLINSMLDPGDVVVRTEDIILC HHHHHHHHCCCCCEEEEECEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-amino-4-deoxychorismate
Specific reaction: 4-amino-4-deoxychorismate = 4-aminobenzoate + pyruvate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]