Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is pabB [C]
Identifier: 187736431
GI number: 187736431
Start: 2367143
End: 2368159
Strand: Reverse
Name: pabB [C]
Synonym: Amuc_1949
Alternate gene names: 187736431
Gene position: 2368159-2367143 (Counterclockwise)
Preceding gene: 187736434
Following gene: 187736430
Centisome position: 88.89
GC content: 58.31
Gene sequence:
>1017_bases ATGTACACACGGGAACAGACCATCAGCCGCATGAATGCCCTGGGCCGTGCGGAGTGTCCGTTCTTTTTTGTCATCTCCCA TGATATGGGCCATAACCTGCTGTTTGAACCTTCGGAAACGGAGGGGGAGCGCATGGCTGCTTTTTCCCTGCCGCTGGGCA CGATGGGAAATCAGGACGGCGGCCCTCCGCTTCCGGAACGGCTGCGGTTCATTCCATCCCCCCATCCCGTGTCCCGGTAT GCGGCATCCTTCGCCTCCGTCCGGAACCATCTGATGAGGGGGGATTCCTACCTGCTGAATTTATGCGTGTCCACCCCCGT GGAAACCAACCTGACGCTGCGCCATCTGTTCCGGTTTGCCCGCGCGCCTTACCGGATGCTGCTGGGGCCGGACGCGCGGA TTTCCGGAGTGCACGGCCGCGGCTGCGTCTGCTTTTCTCCGGAACCGTTTGTCACGGTGCGCGGCCGCTCCATTTCCACG TTTCCCATGAAGGGAACGGTTCCGTCCGCTACGCAGGAAGCGCGCCGCTGGCTGGAAACGGATGAAAAGGAGAATAGGGA ATCCGCCACCATTGTGGATCTGATGCGCAATGATCTTTCCATGGTGGCAACCGGCGTGAGGGTGAAGCGTTACCGCTATA TCAGCCCTGTAGAAACGTCCAAAGGGCCTATTCTTCAATGCAGTTCCGAGATTTCCGGGCTGTTGCCGGAAAACTGGCGT TCCCGCCTGGGGGAAATCCTTCTGAAGCTGCTTCCTGCCGGGAGCGTGACCGGAGCGCCCAAGGAAGCCACCTGCCGGGC CATCGCGGAAGCGGAGGATATGGAGAGGGGGTTTTATACCGGAATTTTCGGCTTTTTCAACGGGCGGGATTTGGATTCCG CCGTCTCCATCCGCTTCATGGAGGAGGATGAACGGGGAATGGTATACAAGAGCGGTGGAGGAATTACCGTCATGAGCCGG ATGGAAGAGGAATACCAGGAAGCTGTTGCCAAAGTTTATGTGCCGTTTGATTTTTGA
Upstream 100 bases:
>100_bases TGACGAGTTCCGCAAGATTCCAGGTGAAGGAATCCCGGTGGTCGATGATCCAGACGTTCGGTTGACTCATGGCGCGCACA TGATAGAGTAATTCCCGACA
Downstream 100 bases:
>100_bases AACCGTTAAATGGGAGAATGGCGCTCCCTGTCTGCTTCCCTGGCACCAGCGGAGGATGGAGGCCGCCATCGGCGTTCATG GTTCGGACGGAGCTTCCGTC
Product: para-aminobenzoate synthase component I
Products: 4-amino-4-deoxychorismate; L-glutamate
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MYTREQTISRMNALGRAECPFFFVISHDMGHNLLFEPSETEGERMAAFSLPLGTMGNQDGGPPLPERLRFIPSPHPVSRY AASFASVRNHLMRGDSYLLNLCVSTPVETNLTLRHLFRFARAPYRMLLGPDARISGVHGRGCVCFSPEPFVTVRGRSIST FPMKGTVPSATQEARRWLETDEKENRESATIVDLMRNDLSMVATGVRVKRYRYISPVETSKGPILQCSSEISGLLPENWR SRLGEILLKLLPAGSVTGAPKEATCRAIAEAEDMERGFYTGIFGFFNGRDLDSAVSIRFMEEDERGMVYKSGGGITVMSR MEEEYQEAVAKVYVPFDF
Sequences:
>Translated_338_residues MYTREQTISRMNALGRAECPFFFVISHDMGHNLLFEPSETEGERMAAFSLPLGTMGNQDGGPPLPERLRFIPSPHPVSRY AASFASVRNHLMRGDSYLLNLCVSTPVETNLTLRHLFRFARAPYRMLLGPDARISGVHGRGCVCFSPEPFVTVRGRSIST FPMKGTVPSATQEARRWLETDEKENRESATIVDLMRNDLSMVATGVRVKRYRYISPVETSKGPILQCSSEISGLLPENWR SRLGEILLKLLPAGSVTGAPKEATCRAIAEAEDMERGFYTGIFGFFNGRDLDSAVSIRFMEEDERGMVYKSGGGITVMSR MEEEYQEAVAKVYVPFDF >Mature_338_residues MYTREQTISRMNALGRAECPFFFVISHDMGHNLLFEPSETEGERMAAFSLPLGTMGNQDGGPPLPERLRFIPSPHPVSRY AASFASVRNHLMRGDSYLLNLCVSTPVETNLTLRHLFRFARAPYRMLLGPDARISGVHGRGCVCFSPEPFVTVRGRSIST FPMKGTVPSATQEARRWLETDEKENRESATIVDLMRNDLSMVATGVRVKRYRYISPVETSKGPILQCSSEISGLLPENWR SRLGEILLKLLPAGSVTGAPKEATCRAIAEAEDMERGFYTGIFGFFNGRDLDSAVSIRFMEEDERGMVYKSGGGITVMSR MEEEYQEAVAKVYVPFDF
Specific function: Catalyzes The Biosynthesis Of 4-Amino-4-Deoxychorismate (Adc) From Chorismate And Glutamine. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To the C-terminal of para-aminobenzoate synthase component I [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=268, Percent_Identity=29.4776119402985, Blast_Score=96, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6324361, Length=299, Percent_Identity=28.7625418060201, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6320935, Length=339, Percent_Identity=26.2536873156342, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR015890 [H]
Pfam domain/function: PF00425 Chorismate_bind [H]
EC number: 6.3.5.8
Molecular weight: Translated: 37821; Mature: 37821
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTREQTISRMNALGRAECPFFFVISHDMGHNLLFEPSETEGERMAAFSLPLGTMGNQDG CCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCC GPPLPERLRFIPSPHPVSRYAASFASVRNHLMRGDSYLLNLCVSTPVETNLTLRHLFRFA CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEHHHHCCCCCCCHHHHHHHHHH RAPYRMLLGPDARISGVHGRGCVCFSPEPFVTVRGRSISTFPMKGTVPSATQEARRWLET CCCCEEEECCCCCEECCCCCEEEEECCCCEEEECCCEEEECCCCCCCCCHHHHHHHHHCC DEKENRESATIVDLMRNDLSMVATGVRVKRYRYISPVETSKGPILQCSSEISGLLPENWR CCCCCCHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCEEEECHHHCCCCCHHHH SRLGEILLKLLPAGSVTGAPKEATCRAIAEAEDMERGFYTGIFGFFNGRDLDSAVSIRFM HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCEEEEEEE EEDERGMVYKSGGGITVMSRMEEEYQEAVAKVYVPFDF ECCCCCEEEECCCCEEHHHHHHHHHHHHHHEEECCCCC >Mature Secondary Structure MYTREQTISRMNALGRAECPFFFVISHDMGHNLLFEPSETEGERMAAFSLPLGTMGNQDG CCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCC GPPLPERLRFIPSPHPVSRYAASFASVRNHLMRGDSYLLNLCVSTPVETNLTLRHLFRFA CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEHHHHCCCCCCCHHHHHHHHHH RAPYRMLLGPDARISGVHGRGCVCFSPEPFVTVRGRSISTFPMKGTVPSATQEARRWLET CCCCEEEECCCCCEECCCCCEEEEECCCCEEEECCCEEEECCCCCCCCCHHHHHHHHHCC DEKENRESATIVDLMRNDLSMVATGVRVKRYRYISPVETSKGPILQCSSEISGLLPENWR CCCCCCHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCEEEECHHHCCCCCHHHH SRLGEILLKLLPAGSVTGAPKEATCRAIAEAEDMERGFYTGIFGFFNGRDLDSAVSIRFM HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCEEEEEEE EEDERGMVYKSGGGITVMSRMEEEYQEAVAKVYVPFDF ECCCCCEEEECCCCEEHHHHHHHHHHHHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: chorismate; L-glutamine
Specific reaction: chorismate + L-glutamine = 4-amino-4-deoxychorismate + L-glutamate
General reaction: Lyases; Carbon-Carbon Lyases; Oxo-Acid-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]