Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187736429
Identifier: 187736429
GI number: 187736429
Start: 2365259
End: 2366440
Strand: Direct
Name: 187736429
Synonym: Amuc_1947
Alternate gene names: NA
Gene position: 2365259-2366440 (Clockwise)
Preceding gene: 187736428
Following gene: 187736432
Centisome position: 88.78
GC content: 58.8
Gene sequence:
>1182_bases ATGGCTGCAACTCTTGATATGCCCTCTTTGGGCAAGTTCTACCGCCGCCAGCTTCTGGAAGACGTTCTGCCGTTCTGGTT CCCCCGCGCCTACGACGAAAAAAACGGTGGTCTTTACCACTGCTTTGACGCAGACGGCACGCTGGTGGACTCCGACAAAT CCGTCTGGGCCCAGGGCCGCATGGCATGGATGCTGCTGACAATGTACAACAGCATCGAAAAGAATACGGACTGGCTCAAA TGGGCGGAAAGCGCCTTGGAATTCCTGAAAACCAAGTGCGTTGACCCGGCGGACGGCCGCATGTTCTTTCATGTGGCTGC CGACGGCACCCCCATCCGCAAACGCCGCTACGCCTACAGCGAATCTTTCGCCGCCATCGCCTTTGCAGCGCACGCCAGGG CGACCGGCAGCCGGGATTCCGCCCGTGAAGCCCGCCACTGGTTCGACATCTTCACGGACAACTGCTTCACTCCCGGCAAA ATGGTTCCCAAATTCACCGGGGAACGCCCTACGACCGGTCTGGGCACCCGCATGATTACCCTGAACACAGCTCAGGAAAT GCGCAAGTACCTGGAAGATGACGACGGCTTCTATACCGGCTGGACAGACCGCTGCATCAACGACCTCCGCACCCTGTTCA TGAAACCTGACATCCAGGCAGTCATGGAAGTGGTGGGAACGGACGGTTCCATCATCGACCACTTCGACGAACGCACCCTG AACCCCGGCCACACTACGGAGGGTGGGTGGTTCGTGCTGGAAGAAGCCCGCCATCGCGGCAATGACCCCGAACTCATCAA GGTGGGCTGCGACATGATCGACTGGGCATTCGCCCGCGGCTGGGACAAGGAAAACGGCGGCATGCTGTACTACACGGACG TGTACAACAAGCCCGTTCAGGAATACTGGCACAACATGAAGTTCTGGTGGCCGCATGATGAAGCGCTCATCGCCATGACG CTCGCCTACAAGCTCACAGGGGAAGAACGCTATGCCATCCGTCACGACATGGTGCGCAACTGGGCTTTCTCCCACTTCCA GGACGTTCAGCATGGCGACTGGTTCGGCTATCTGAACAAGGACGGTTCCAGGGCTAACACCCTCAAGGGGAGCCTCTGGA AATCCTTCTTCCACCATCCCCGCGCCATGTGGTGCTGCGCCCACTACTGCGGCGCCATTTAA
Upstream 100 bases:
>100_bases GGCAACCCGACCGCAGATCAGCTGAAGGAACTCCGTTCCGAACTGGAAGGCATCGGCTTCTTCCAGTGGGCTTTAAACTG AACCCCGGAACCTGACTGAC
Downstream 100 bases:
>100_bases GAAGGCGTCAGGCGGTCATTCCATATCCATGGAACGGCCGCTTTTTTATGCCCTCAATACCAAAATTCAGAGGGTTCCGG ATAAAACAATCTATCCGTTT
Product: N-acylglucosamine 2-epimerase
Products: N-acyl-D-mannosamine
Alternate protein names: N-Acylglucosamine 2-Epimerase Superfamily; N-Acyl-D-Glucosamine 2-Epimerase
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MAATLDMPSLGKFYRRQLLEDVLPFWFPRAYDEKNGGLYHCFDADGTLVDSDKSVWAQGRMAWMLLTMYNSIEKNTDWLK WAESALEFLKTKCVDPADGRMFFHVAADGTPIRKRRYAYSESFAAIAFAAHARATGSRDSAREARHWFDIFTDNCFTPGK MVPKFTGERPTTGLGTRMITLNTAQEMRKYLEDDDGFYTGWTDRCINDLRTLFMKPDIQAVMEVVGTDGSIIDHFDERTL NPGHTTEGGWFVLEEARHRGNDPELIKVGCDMIDWAFARGWDKENGGMLYYTDVYNKPVQEYWHNMKFWWPHDEALIAMT LAYKLTGEERYAIRHDMVRNWAFSHFQDVQHGDWFGYLNKDGSRANTLKGSLWKSFFHHPRAMWCCAHYCGAI
Sequences:
>Translated_393_residues MAATLDMPSLGKFYRRQLLEDVLPFWFPRAYDEKNGGLYHCFDADGTLVDSDKSVWAQGRMAWMLLTMYNSIEKNTDWLK WAESALEFLKTKCVDPADGRMFFHVAADGTPIRKRRYAYSESFAAIAFAAHARATGSRDSAREARHWFDIFTDNCFTPGK MVPKFTGERPTTGLGTRMITLNTAQEMRKYLEDDDGFYTGWTDRCINDLRTLFMKPDIQAVMEVVGTDGSIIDHFDERTL NPGHTTEGGWFVLEEARHRGNDPELIKVGCDMIDWAFARGWDKENGGMLYYTDVYNKPVQEYWHNMKFWWPHDEALIAMT LAYKLTGEERYAIRHDMVRNWAFSHFQDVQHGDWFGYLNKDGSRANTLKGSLWKSFFHHPRAMWCCAHYCGAI >Mature_392_residues AATLDMPSLGKFYRRQLLEDVLPFWFPRAYDEKNGGLYHCFDADGTLVDSDKSVWAQGRMAWMLLTMYNSIEKNTDWLKW AESALEFLKTKCVDPADGRMFFHVAADGTPIRKRRYAYSESFAAIAFAAHARATGSRDSAREARHWFDIFTDNCFTPGKM VPKFTGERPTTGLGTRMITLNTAQEMRKYLEDDDGFYTGWTDRCINDLRTLFMKPDIQAVMEVVGTDGSIIDHFDERTLN PGHTTEGGWFVLEEARHRGNDPELIKVGCDMIDWAFARGWDKENGGMLYYTDVYNKPVQEYWHNMKFWWPHDEALIAMTL AYKLTGEERYAIRHDMVRNWAFSHFQDVQHGDWFGYLNKDGSRANTLKGSLWKSFFHHPRAMWCCAHYCGAI
Specific function: Unknown
COG id: COG2942
COG function: function code G; N-acyl-D-glucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI213417820, Length=384, Percent_Identity=32.5520833333333, Blast_Score=196, Evalue=4e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 5.1.3.8
Molecular weight: Translated: 45601; Mature: 45470
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATLDMPSLGKFYRRQLLEDVLPFWFPRAYDEKNGGLYHCFDADGTLVDSDKSVWAQGR CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEECCHHHHHHHH MAWMLLTMYNSIEKNTDWLKWAESALEFLKTKCVDPADGRMFFHVAADGTPIRKRRYAYS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHH ESFAAIAFAAHARATGSRDSAREARHWFDIFTDNCFTPGKMVPKFTGERPTTGLGTRMIT HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEE LNTAQEMRKYLEDDDGFYTGWTDRCINDLRTLFMKPDIQAVMEVVGTDGSIIDHFDERTL ECCHHHHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCC NPGHTTEGGWFVLEEARHRGNDPELIKVGCDMIDWAFARGWDKENGGMLYYTDVYNKPVQ CCCCCCCCCEEEEEHHHHCCCCCCEEEECCHHHHHHHHCCCCCCCCCEEEEEHHHCCHHH EYWHNMKFWWPHDEALIAMTLAYKLTGEERYAIRHDMVRNWAFSHFQDVQHGDWFGYLNK HHHCCCEEECCCCCHHEEEEEHHEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC DGSRANTLKGSLWKSFFHHPRAMWCCAHYCGAI CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure AATLDMPSLGKFYRRQLLEDVLPFWFPRAYDEKNGGLYHCFDADGTLVDSDKSVWAQGR CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEECCHHHHHHHH MAWMLLTMYNSIEKNTDWLKWAESALEFLKTKCVDPADGRMFFHVAADGTPIRKRRYAYS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHH ESFAAIAFAAHARATGSRDSAREARHWFDIFTDNCFTPGKMVPKFTGERPTTGLGTRMIT HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEE LNTAQEMRKYLEDDDGFYTGWTDRCINDLRTLFMKPDIQAVMEVVGTDGSIIDHFDERTL ECCHHHHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCC NPGHTTEGGWFVLEEARHRGNDPELIKVGCDMIDWAFARGWDKENGGMLYYTDVYNKPVQ CCCCCCCCCEEEEEHHHHCCCCCCEEEECCHHHHHHHHCCCCCCCCCEEEEEHHHCCHHH EYWHNMKFWWPHDEALIAMTLAYKLTGEERYAIRHDMVRNWAFSHFQDVQHGDWFGYLNK HHHCCCEEECCCCCHHEEEEEHHEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC DGSRANTLKGSLWKSFFHHPRAMWCCAHYCGAI CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N-acyl-D-glucosamine
Specific reaction: N-acyl-D-glucosamine = N-acyl-D-mannosamine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA