Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is pabA [C]

Identifier: 187736432

GI number: 187736432

Start: 2368190

End: 2368807

Strand: Direct

Name: pabA [C]

Synonym: Amuc_1950

Alternate gene names: 187736432

Gene position: 2368190-2368807 (Clockwise)

Preceding gene: 187736429

Following gene: 187736433

Centisome position: 88.89

GC content: 61.81

Gene sequence:

>618_bases
ATGAGTCAACCGAACGTCTGGATCATCGACCACCGGGATTCCTTCACCTGGAATCTTGCGGAACTCGTCAGAATGACGGG
AATGGCCGTTCCGCGCGTGGTTTCCAATGAATCCCCGGAACTGGAACAGGCGGTTCAGGCGGGGGAAAAGCTTATCCTGT
CTCCCGGTCCGGGAACGGTGGAGGATGCCTGCCACCGGGCCACCTTCCGTCTTCTGGACCGCCTGCCCCGCTTTACCCCG
GTGCTGGGCGTATGCCTGGGGCATCAGATCCTGGGCGTGCGCTTCGGAGCCCGTCTGGAACACCTTTCCCGCCCCCTTCA
CGGAGCGCGGGAAGTCATATGCAGGACGGAGCAGTGTCCCCTCCTGGAAGGATTGCCGGAGCAATTTCCTGCCGCGCTTT
ACCATTCCTGGCGCCTTGCCGCTTTTCCCTGGCCGGCGGAGCTGATTGTCACGGCGAGGGATTCCGGGAAAAACGTGCAG
GCCATCCGCCACAGGCACCTCCCCCTTTACGGCATTCAGTTCCATCCGGAATCCATCCTGACGCCGGACGGAGAAGCGCT
GCTCCGGAACTTCCTGTCCCTTCCGGCAGGCAGCAGGGAAAAACGGCGCATCAAATGA

Upstream 100 bases:

>100_bases
CAAAAAAGAACGGACACTCCGCACGGCCCAGGGCATTCATGCGGCTGATGGTCTGTTCCCGTGTGTACATTGTCGGGAAT
TACTCTATCATGTGCGCGCC

Downstream 100 bases:

>100_bases
TTCAATTCCAGCCGCCTGGCATCAGGGATGAACGGGACAAGACCGGAAAGTGTCTCACTCCCGTGCGGTTCCGGTTCCCA
TGCCCGGCCGCTTCAGAGAT

Product: glutamine amidotransferase class-I

Products: NA

Alternate protein names: Glutamine amido-transferase [H]

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSQPNVWIIDHRDSFTWNLAELVRMTGMAVPRVVSNESPELEQAVQAGEKLILSPGPGTVEDACHRATFRLLDRLPRFTP
VLGVCLGHQILGVRFGARLEHLSRPLHGAREVICRTEQCPLLEGLPEQFPAALYHSWRLAAFPWPAELIVTARDSGKNVQ
AIRHRHLPLYGIQFHPESILTPDGEALLRNFLSLPAGSREKRRIK

Sequences:

>Translated_205_residues
MSQPNVWIIDHRDSFTWNLAELVRMTGMAVPRVVSNESPELEQAVQAGEKLILSPGPGTVEDACHRATFRLLDRLPRFTP
VLGVCLGHQILGVRFGARLEHLSRPLHGAREVICRTEQCPLLEGLPEQFPAALYHSWRLAAFPWPAELIVTARDSGKNVQ
AIRHRHLPLYGIQFHPESILTPDGEALLRNFLSLPAGSREKRRIK
>Mature_204_residues
SQPNVWIIDHRDSFTWNLAELVRMTGMAVPRVVSNESPELEQAVQAGEKLILSPGPGTVEDACHRATFRLLDRLPRFTPV
LGVCLGHQILGVRFGARLEHLSRPLHGAREVICRTEQCPLLEGLPEQFPAALYHSWRLAAFPWPAELIVTARDSGKNVQA
IRHRHLPLYGIQFHPESILTPDGEALLRNFLSLPAGSREKRRIK

Specific function: Catalyzes The Biosynthesis Of 4-Amino-4-Deoxychorismate (Adc) From Chorismate And Glutamine. [C]

COG id: COG0512

COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789760, Length=188, Percent_Identity=34.5744680851064, Blast_Score=101, Evalue=3e-23,
Organism=Escherichia coli, GI1787517, Length=193, Percent_Identity=36.7875647668394, Blast_Score=96, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6322638, Length=203, Percent_Identity=31.0344827586207, Blast_Score=107, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6324361, Length=253, Percent_Identity=24.901185770751, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006220
- InterPro:   IPR011702
- InterPro:   IPR017926
- InterPro:   IPR000991
- InterPro:   IPR006221 [H]

Pfam domain/function: PF00117 GATase [H]

EC number: =4.1.3.27 [H]

Molecular weight: Translated: 23067; Mature: 22936

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS00442 GATASE_TYPE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPNVWIIDHRDSFTWNLAELVRMTGMAVPRVVSNESPELEQAVQAGEKLILSPGPGTV
CCCCCEEEEECCCCCCCCHHHHHHHHCCCCCHHHCCCCCHHHHHHHHCCEEEECCCCCCH
EDACHRATFRLLDRLPRFTPVLGVCLGHQILGVRFGARLEHLSRPLHGAREVICRTEQCP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC
LLEGLPEQFPAALYHSWRLAAFPWPAELIVTARDSGKNVQAIRHRHLPLYGIQFHPESIL
HHCCCCHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCHHHHHHCCCCEEEEEECCCCCC
TPDGEALLRNFLSLPAGSREKRRIK
CCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SQPNVWIIDHRDSFTWNLAELVRMTGMAVPRVVSNESPELEQAVQAGEKLILSPGPGTV
CCCCEEEEECCCCCCCCHHHHHHHHCCCCCHHHCCCCCHHHHHHHHCCEEEECCCCCCH
EDACHRATFRLLDRLPRFTPVLGVCLGHQILGVRFGARLEHLSRPLHGAREVICRTEQCP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC
LLEGLPEQFPAALYHSWRLAAFPWPAELIVTARDSGKNVQAIRHRHLPLYGIQFHPESIL
HHCCCCHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCHHHHHHCCCCEEEEEECCCCCC
TPDGEALLRNFLSLPAGSREKRRIK
CCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]