Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is pabA [C]
Identifier: 187736432
GI number: 187736432
Start: 2368190
End: 2368807
Strand: Direct
Name: pabA [C]
Synonym: Amuc_1950
Alternate gene names: 187736432
Gene position: 2368190-2368807 (Clockwise)
Preceding gene: 187736429
Following gene: 187736433
Centisome position: 88.89
GC content: 61.81
Gene sequence:
>618_bases ATGAGTCAACCGAACGTCTGGATCATCGACCACCGGGATTCCTTCACCTGGAATCTTGCGGAACTCGTCAGAATGACGGG AATGGCCGTTCCGCGCGTGGTTTCCAATGAATCCCCGGAACTGGAACAGGCGGTTCAGGCGGGGGAAAAGCTTATCCTGT CTCCCGGTCCGGGAACGGTGGAGGATGCCTGCCACCGGGCCACCTTCCGTCTTCTGGACCGCCTGCCCCGCTTTACCCCG GTGCTGGGCGTATGCCTGGGGCATCAGATCCTGGGCGTGCGCTTCGGAGCCCGTCTGGAACACCTTTCCCGCCCCCTTCA CGGAGCGCGGGAAGTCATATGCAGGACGGAGCAGTGTCCCCTCCTGGAAGGATTGCCGGAGCAATTTCCTGCCGCGCTTT ACCATTCCTGGCGCCTTGCCGCTTTTCCCTGGCCGGCGGAGCTGATTGTCACGGCGAGGGATTCCGGGAAAAACGTGCAG GCCATCCGCCACAGGCACCTCCCCCTTTACGGCATTCAGTTCCATCCGGAATCCATCCTGACGCCGGACGGAGAAGCGCT GCTCCGGAACTTCCTGTCCCTTCCGGCAGGCAGCAGGGAAAAACGGCGCATCAAATGA
Upstream 100 bases:
>100_bases CAAAAAAGAACGGACACTCCGCACGGCCCAGGGCATTCATGCGGCTGATGGTCTGTTCCCGTGTGTACATTGTCGGGAAT TACTCTATCATGTGCGCGCC
Downstream 100 bases:
>100_bases TTCAATTCCAGCCGCCTGGCATCAGGGATGAACGGGACAAGACCGGAAAGTGTCTCACTCCCGTGCGGTTCCGGTTCCCA TGCCCGGCCGCTTCAGAGAT
Product: glutamine amidotransferase class-I
Products: NA
Alternate protein names: Glutamine amido-transferase [H]
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSQPNVWIIDHRDSFTWNLAELVRMTGMAVPRVVSNESPELEQAVQAGEKLILSPGPGTVEDACHRATFRLLDRLPRFTP VLGVCLGHQILGVRFGARLEHLSRPLHGAREVICRTEQCPLLEGLPEQFPAALYHSWRLAAFPWPAELIVTARDSGKNVQ AIRHRHLPLYGIQFHPESILTPDGEALLRNFLSLPAGSREKRRIK
Sequences:
>Translated_205_residues MSQPNVWIIDHRDSFTWNLAELVRMTGMAVPRVVSNESPELEQAVQAGEKLILSPGPGTVEDACHRATFRLLDRLPRFTP VLGVCLGHQILGVRFGARLEHLSRPLHGAREVICRTEQCPLLEGLPEQFPAALYHSWRLAAFPWPAELIVTARDSGKNVQ AIRHRHLPLYGIQFHPESILTPDGEALLRNFLSLPAGSREKRRIK >Mature_204_residues SQPNVWIIDHRDSFTWNLAELVRMTGMAVPRVVSNESPELEQAVQAGEKLILSPGPGTVEDACHRATFRLLDRLPRFTPV LGVCLGHQILGVRFGARLEHLSRPLHGAREVICRTEQCPLLEGLPEQFPAALYHSWRLAAFPWPAELIVTARDSGKNVQA IRHRHLPLYGIQFHPESILTPDGEALLRNFLSLPAGSREKRRIK
Specific function: Catalyzes The Biosynthesis Of 4-Amino-4-Deoxychorismate (Adc) From Chorismate And Glutamine. [C]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789760, Length=188, Percent_Identity=34.5744680851064, Blast_Score=101, Evalue=3e-23, Organism=Escherichia coli, GI1787517, Length=193, Percent_Identity=36.7875647668394, Blast_Score=96, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6322638, Length=203, Percent_Identity=31.0344827586207, Blast_Score=107, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6324361, Length=253, Percent_Identity=24.901185770751, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 23067; Mature: 22936
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPNVWIIDHRDSFTWNLAELVRMTGMAVPRVVSNESPELEQAVQAGEKLILSPGPGTV CCCCCEEEEECCCCCCCCHHHHHHHHCCCCCHHHCCCCCHHHHHHHHCCEEEECCCCCCH EDACHRATFRLLDRLPRFTPVLGVCLGHQILGVRFGARLEHLSRPLHGAREVICRTEQCP HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC LLEGLPEQFPAALYHSWRLAAFPWPAELIVTARDSGKNVQAIRHRHLPLYGIQFHPESIL HHCCCCHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCHHHHHHCCCCEEEEEECCCCCC TPDGEALLRNFLSLPAGSREKRRIK CCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SQPNVWIIDHRDSFTWNLAELVRMTGMAVPRVVSNESPELEQAVQAGEKLILSPGPGTV CCCCEEEEECCCCCCCCHHHHHHHHCCCCCHHHCCCCCHHHHHHHHCCEEEECCCCCCH EDACHRATFRLLDRLPRFTPVLGVCLGHQILGVRFGARLEHLSRPLHGAREVICRTEQCP HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC LLEGLPEQFPAALYHSWRLAAFPWPAELIVTARDSGKNVQAIRHRHLPLYGIQFHPESIL HHCCCCHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCHHHHHHCCCCEEEEEECCCCCC TPDGEALLRNFLSLPAGSREKRRIK CCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]