Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736418
Identifier: 187736418
GI number: 187736418
Start: 2349513
End: 2349944
Strand: Reverse
Name: 187736418
Synonym: Amuc_1936
Alternate gene names: NA
Gene position: 2349944-2349513 (Counterclockwise)
Preceding gene: 187736419
Following gene: 187736417
Centisome position: 88.21
GC content: 54.63
Gene sequence:
>432_bases ATGAAAATCAACAGGGCAAGACAACAGGAAAGCGTGGCCGTTTTCGGCCGCGAAACATCTCTTATACGGGATGTTCTGGA CAATCTGGAACTGGAACATGCGCTGACGTGGCTGTTGGAGGCCATCAGCCAACACCAGTCCGGAAAAATGGGCGGGGAAC CGTGGCACCTGTACCAGACCACGCTGTTCGCCATGTATGTGGACTATGACAACGGCAAAGTGCGCCTGTCCGCCGCGCTG GCATGCCACGATGCAGATCTGGAAATGTCCTTGAAGGATTTTGTGGAGATATTGAGCCGTGAAGCCATCAAGGAGGCGGC CCCTCTTCATTATACCCCTGGGAGTTCCGGCAAATGCATCCACCGCTACCGCAATCCGTATTTTAAACGCAGGCGGCGGG ACCGGGAACCGGACATTGGTTTTTACTCCTGA
Upstream 100 bases:
>100_bases GATTGAACAACCTGTTGAAAAAAAGTGTCCAAAACAATTGGAGCGGCAGAATTATCCGCCGTCCTGCTTAACAAGGGAAA CCGGAAAGGAGAACCAAGAC
Downstream 100 bases:
>100_bases GACGGATTTCTCCGCGAAGTGACATCCTATCCTTTCCAAAAGGCCGGGTTCTCTATGGACTCCGGCCTTTTTTCACTTTT TCGGGAGGGCTTTCCATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKINRARQQESVAVFGRETSLIRDVLDNLELEHALTWLLEAISQHQSGKMGGEPWHLYQTTLFAMYVDYDNGKVRLSAAL ACHDADLEMSLKDFVEILSREAIKEAAPLHYTPGSSGKCIHRYRNPYFKRRRRDREPDIGFYS
Sequences:
>Translated_143_residues MKINRARQQESVAVFGRETSLIRDVLDNLELEHALTWLLEAISQHQSGKMGGEPWHLYQTTLFAMYVDYDNGKVRLSAAL ACHDADLEMSLKDFVEILSREAIKEAAPLHYTPGSSGKCIHRYRNPYFKRRRRDREPDIGFYS >Mature_143_residues MKINRARQQESVAVFGRETSLIRDVLDNLELEHALTWLLEAISQHQSGKMGGEPWHLYQTTLFAMYVDYDNGKVRLSAAL ACHDADLEMSLKDFVEILSREAIKEAAPLHYTPGSSGKCIHRYRNPYFKRRRRDREPDIGFYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16559; Mature: 16559
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINRARQQESVAVFGRETSLIRDVLDNLELEHALTWLLEAISQHQSGKMGGEPWHLYQT CCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH TLFAMYVDYDNGKVRLSAALACHDADLEMSLKDFVEILSREAIKEAAPLHYTPGSSGKCI EEEEEEEECCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCHH HRYRNPYFKRRRRDREPDIGFYS HHHCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKINRARQQESVAVFGRETSLIRDVLDNLELEHALTWLLEAISQHQSGKMGGEPWHLYQT CCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH TLFAMYVDYDNGKVRLSAALACHDADLEMSLKDFVEILSREAIKEAAPLHYTPGSSGKCI EEEEEEEECCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCHH HRYRNPYFKRRRRDREPDIGFYS HHHCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA