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The map label for this gene is yclN [H]

Identifier: 187736413

GI number: 187736413

Start: 2343375

End: 2344340

Strand: Reverse

Name: yclN [H]

Synonym: Amuc_1931

Alternate gene names: 187736413

Gene position: 2344340-2343375 (Counterclockwise)

Preceding gene: 187736414

Following gene: 187736412

Centisome position: 88.0

GC content: 55.07

Gene sequence:

>966_bases
ATGGCATTCAGAATCATTCAGTGGAGCTTTCTGCTTGGCCTTGCCTTTTATTCGCTCTTTATCGGGGCAGCTCAAGTGTC
CTTGTCCGACCTGTGGCGGATGGATGGCGAGCAACTGCAGTTCTGGTGGGAGATCATGTTGCAAAGCCGCATTCCGCGCC
TCTGCAGCATTCTCGTGGTAGGCAGCAGCATGGCCATCAGCGGCTTGATCATGCAGCGCATCACCAATAACCGCTTCGTG
TCGCCGACCACGGCAGGCACGATGGAGTGGTGCCGCTTTGGGGTAATGGTCGCCATCCTTTATCTGCCCGGAGCCTCTCC
CATTTGGCGCGTGGGGGCCGCCTTCGTGATTTCTCTGATAGGCACCTCATGCTTTCTGGCGGTGATTGCGCGCGTGCGGC
ACCAGAATGTCATTCTGGTGCCCCTGATAGGAATCATGCTGGGCGGCGTGGTGAATGCCGGAGCCGTTTTTTATGCCTAC
CAGTTTGATATTGTACAGAATATGGCGTCATGGCTGCAGGGGAGTTTCTCCCTTGTCATTGAGGGCAATTATGAATTGCT
CTATGCCAGCATCCCGTTGATGCTGCTGGCCTATGTTTATGCCGATTTCTTTACGATTGCCGGCATGGGGCGTGATGCCG
CGGTGGCGTTGGGGCTGAACCACGCAAGCATCATGCGCATGGGACTGGTGATAGTATCCATCATCAGCTCAATCACGATT
GTGGAGGTAGGCTACCTCCCCTTCATCGGGTTGATCGTGCCCAATATCGTGAGCATTTTCCGGGGGGATGCCGTGAAGAA
AATCTTGTTTGATACGGCTTGGCTGGGGGCCATGCTTGTTCTTGTTTGCGACGTGGCAGGGCGCATGCTTATCGCCCCCT
TCGAAATCCCCATCGGCGTTATCCTGAGCGTGGTCGGCGGTGCTGTATTTCTGGCCATGCTCTTCCATAGAAAAACGTAT
GCCTGA

Upstream 100 bases:

>100_bases
CTCGCCATCATGCCCTGCATCGGCATACAGGCCGATGTGTGCCGGGACAATCTGTTGTTTGAAATGGAACTTGATGCAGC
CGTGTTGAAAGCCTGAGAAA

Downstream 100 bases:

>100_bases
TTCCATTCAACATCAAAAAGATGATGCCTTCCGCAATGCTGCCGGCCGGCGTCGCGCGTTCCCGGCCTTCCTGATTCTGG
GACTGCTCTGCGTGGGACTG

Product: transporter permease

Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MAFRIIQWSFLLGLAFYSLFIGAAQVSLSDLWRMDGEQLQFWWEIMLQSRIPRLCSILVVGSSMAISGLIMQRITNNRFV
SPTTAGTMEWCRFGVMVAILYLPGASPIWRVGAAFVISLIGTSCFLAVIARVRHQNVILVPLIGIMLGGVVNAGAVFYAY
QFDIVQNMASWLQGSFSLVIEGNYELLYASIPLMLLAYVYADFFTIAGMGRDAAVALGLNHASIMRMGLVIVSIISSITI
VEVGYLPFIGLIVPNIVSIFRGDAVKKILFDTAWLGAMLVLVCDVAGRMLIAPFEIPIGVILSVVGGAVFLAMLFHRKTY
A

Sequences:

>Translated_321_residues
MAFRIIQWSFLLGLAFYSLFIGAAQVSLSDLWRMDGEQLQFWWEIMLQSRIPRLCSILVVGSSMAISGLIMQRITNNRFV
SPTTAGTMEWCRFGVMVAILYLPGASPIWRVGAAFVISLIGTSCFLAVIARVRHQNVILVPLIGIMLGGVVNAGAVFYAY
QFDIVQNMASWLQGSFSLVIEGNYELLYASIPLMLLAYVYADFFTIAGMGRDAAVALGLNHASIMRMGLVIVSIISSITI
VEVGYLPFIGLIVPNIVSIFRGDAVKKILFDTAWLGAMLVLVCDVAGRMLIAPFEIPIGVILSVVGGAVFLAMLFHRKTY
A
>Mature_320_residues
AFRIIQWSFLLGLAFYSLFIGAAQVSLSDLWRMDGEQLQFWWEIMLQSRIPRLCSILVVGSSMAISGLIMQRITNNRFVS
PTTAGTMEWCRFGVMVAILYLPGASPIWRVGAAFVISLIGTSCFLAVIARVRHQNVILVPLIGIMLGGVVNAGAVFYAYQ
FDIVQNMASWLQGSFSLVIEGNYELLYASIPLMLLAYVYADFFTIAGMGRDAAVALGLNHASIMRMGLVIVSIISSITIV
EVGYLPFIGLIVPNIVSIFRGDAVKKILFDTAWLGAMLVLVCDVAGRMLIAPFEIPIGVILSVVGGAVFLAMLFHRKTYA

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4606

COG function: function code P; ABC-type enterochelin transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788004, Length=298, Percent_Identity=27.5167785234899, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790740, Length=317, Percent_Identity=25.5520504731861, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786347, Length=287, Percent_Identity=22.6480836236934, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 35154; Mature: 35023

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFRIIQWSFLLGLAFYSLFIGAAQVSLSDLWRMDGEQLQFWWEIMLQSRIPRLCSILVV
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GSSMAISGLIMQRITNNRFVSPTTAGTMEWCRFGVMVAILYLPGASPIWRVGAAFVISLI
CCHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
GTSCFLAVIARVRHQNVILVPLIGIMLGGVVNAGAVFYAYQFDIVQNMASWLQGSFSLVI
HHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCEEEEE
EGNYELLYASIPLMLLAYVYADFFTIAGMGRDAAVALGLNHASIMRMGLVIVSIISSITI
ECCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
VEVGYLPFIGLIVPNIVSIFRGDAVKKILFDTAWLGAMLVLVCDVAGRMLIAPFEIPIGV
HHEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHH
ILSVVGGAVFLAMLFHRKTYA
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AFRIIQWSFLLGLAFYSLFIGAAQVSLSDLWRMDGEQLQFWWEIMLQSRIPRLCSILVV
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GSSMAISGLIMQRITNNRFVSPTTAGTMEWCRFGVMVAILYLPGASPIWRVGAAFVISLI
CCHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
GTSCFLAVIARVRHQNVILVPLIGIMLGGVVNAGAVFYAYQFDIVQNMASWLQGSFSLVI
HHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCEEEEE
EGNYELLYASIPLMLLAYVYADFFTIAGMGRDAAVALGLNHASIMRMGLVIVSIISSITI
ECCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
VEVGYLPFIGLIVPNIVSIFRGDAVKKILFDTAWLGAMLVLVCDVAGRMLIAPFEIPIGV
HHEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHH
ILSVVGGAVFLAMLFHRKTYA
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]

Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]