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The map label for this gene is 187736396

Identifier: 187736396

GI number: 187736396

Start: 2322961

End: 2324121

Strand: Reverse

Name: 187736396

Synonym: Amuc_1914

Alternate gene names: NA

Gene position: 2324121-2322961 (Counterclockwise)

Preceding gene: 187736397

Following gene: 187736395

Centisome position: 87.24

GC content: 42.64

Gene sequence:

>1161_bases
ATGAATGAGAAATCGTTGATTCCGTCTATCCGCTTTGCCGGATTTACTGACGCATGGGAACGGCGTAAGCTGGGGGATTT
AGCGGAGTTTAGAAGAGGGCTAACCTATTCACCAAGAGATATATCAACATCTGGAATCAGGGTATTGCGCTCGTCAAATA
TAGATGAGGATTCTTTCGTTTTAGCAGAGGATGATGTTTATGTAAAAGAGACGGCTGTGTGCATCCCGCTTGTTGAAAAA
GGCGACATTTTAATTACCGCAGCTAATGGCTCAAGCAGATTAGTCGGAAAGCATGCTTTGATTATTGACGATAAGGGTAA
AATGGTACACGGCGGGTTCATGCTGCTCGCGCATCCGTATACGCATTCTGCTTTCGTTAATGCTCTTATGCATGCACCCT
GGTACTCATCGTTTATCCGCACTAACGTTGCTGGAGGAAATGGAGCTATAGGAAATCTGAATAAAAGCGATTTGGAAGAA
CAAGATATTGCGGCGACCTCTGAGCAAGAGCAAGAAAGAATCGGTTCCTTGTTTGCCTCCCTCGACCATCTCATCACCCT
TCATCAGCGTAAGTATGAAAAGCTCCTTAACATCAAAAAATCGATGTTGGACAAAATGTTCCCGAAAAATGGTGAGCTTT
TCCCCGAAGTTCGCTTTGCCGGATTTACTGACGCATGGGAACGGCAGAAGCTGGGGGATTTGGTAGAGTCTGTTCCGTTT
AAGCAGTATATAGCATCACCTGAACCTGACGGAAAATTCGAAATTATCCAACAAGGAAGTGAGCCTATTATTGGATATGG
AAACGGAATCCCTTGTGAAGATTATGCAAAGATAACGATTTTCGGAGACCATACAGTTTCAATCTACAAACCACAAAAGC
CCTTTTTTGTAGCCACTGATGGCACAAGACTCCTTACAGCAAGAGTTCTAGATGGAGATTTTTTTTATTTCCTCTTGGAG
CGATACAAACCAATCCCTGAAGGATATAAGCGGCATTACACGATATTGATTGAAAGGTATGGATGTTTTCCTTCCCATCG
AGAGCAAAAGTTAATTGCCATATTTTTTAGGAACATCGACCACCTCATCACCCTTCATCAGCGTAAGTTGGAAAAACTGC
AAAACATCAAGAAAGCCTGTCTGGAAAAAATGTTTGTTTAA

Upstream 100 bases:

>100_bases
ACAGAGTCCTCTCTCGTATCGCTTTTGGATGAATTGACCGGCAACGAGTTCGATATGCAGGGCATTCAGGAACTCAAATC
CCTGCTCGGAGGAAGCGCCC

Downstream 100 bases:

>100_bases
TTGAAAGGAGATTTTATGACTTTTACAACGGAAAGCGCCTTTGAGGAAGCCGTCATTAAGATGTTGTCCGAACACGGATG
GGAAAGCGCAGTATTGAAAA

Product: restriction modification system DNA specificity domain

Products: NA

Alternate protein names: Restriction System DNA Specificity Subunit; Type I R/M System Specificity Subunit; Restriction Endonuclease S Subunit; Restriction System DNA Specificity Domain Protein; Specificity Determinant HsdS; Type I Restriction- System S Subunit; Type I Restriction Specificity Protein; Restriction System DNA Specificity Domain; Type IC Specificity Subunit; Type I Restriction System S Subunit; Type I Restriction S Subunit; Type I Restriction Endonuclease S Subunit; HsdS Protein; Type I Restriction- System; Type I Restriction- System Specificty Subunit; Type Ic Restriction- System HsdS Subunit; Type-I Specificity Determinant Subunit; Restriction- Type I S Subunit; Type I Restriction- System S Protein; HsdS Specificity Protein Of Type I Restriction- System; Type I Site-Specific Deoxyribonucleacificity Subunit; Type I RM System Specificity Subunit HsdIB; Type I Restriction/ System Specificity Subunit; Type I Restriction Specificity Subunit; Type I Restriction Hsds Subunit; Type I Restriction- System DNA Specificity Subunit; Type I Restriction Ecocificity Protein; Type I Restriction Hsds Subunit; HsdS-Like Protein Of Type I Restriction- System; Type I Restriction DNA Specificity Domain Protein; Restriction System Subunit S; Type I Restriction- System Specificity Subunit Protein; Restriction Endonuclease S Subunits-Like Protein; Restriction System Specificitysubunit HsdS; Type IC HsdS Subunit; Specificity Subunit

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MNEKSLIPSIRFAGFTDAWERRKLGDLAEFRRGLTYSPRDISTSGIRVLRSSNIDEDSFVLAEDDVYVKETAVCIPLVEK
GDILITAANGSSRLVGKHALIIDDKGKMVHGGFMLLAHPYTHSAFVNALMHAPWYSSFIRTNVAGGNGAIGNLNKSDLEE
QDIAATSEQEQERIGSLFASLDHLITLHQRKYEKLLNIKKSMLDKMFPKNGELFPEVRFAGFTDAWERQKLGDLVESVPF
KQYIASPEPDGKFEIIQQGSEPIIGYGNGIPCEDYAKITIFGDHTVSIYKPQKPFFVATDGTRLLTARVLDGDFFYFLLE
RYKPIPEGYKRHYTILIERYGCFPSHREQKLIAIFFRNIDHLITLHQRKLEKLQNIKKACLEKMFV

Sequences:

>Translated_386_residues
MNEKSLIPSIRFAGFTDAWERRKLGDLAEFRRGLTYSPRDISTSGIRVLRSSNIDEDSFVLAEDDVYVKETAVCIPLVEK
GDILITAANGSSRLVGKHALIIDDKGKMVHGGFMLLAHPYTHSAFVNALMHAPWYSSFIRTNVAGGNGAIGNLNKSDLEE
QDIAATSEQEQERIGSLFASLDHLITLHQRKYEKLLNIKKSMLDKMFPKNGELFPEVRFAGFTDAWERQKLGDLVESVPF
KQYIASPEPDGKFEIIQQGSEPIIGYGNGIPCEDYAKITIFGDHTVSIYKPQKPFFVATDGTRLLTARVLDGDFFYFLLE
RYKPIPEGYKRHYTILIERYGCFPSHREQKLIAIFFRNIDHLITLHQRKLEKLQNIKKACLEKMFV
>Mature_386_residues
MNEKSLIPSIRFAGFTDAWERRKLGDLAEFRRGLTYSPRDISTSGIRVLRSSNIDEDSFVLAEDDVYVKETAVCIPLVEK
GDILITAANGSSRLVGKHALIIDDKGKMVHGGFMLLAHPYTHSAFVNALMHAPWYSSFIRTNVAGGNGAIGNLNKSDLEE
QDIAATSEQEQERIGSLFASLDHLITLHQRKYEKLLNIKKSMLDKMFPKNGELFPEVRFAGFTDAWERQKLGDLVESVPF
KQYIASPEPDGKFEIIQQGSEPIIGYGNGIPCEDYAKITIFGDHTVSIYKPQKPFFVATDGTRLLTARVLDGDFFYFLLE
RYKPIPEGYKRHYTILIERYGCFPSHREQKLIAIFFRNIDHLITLHQRKLEKLQNIKKACLEKMFV

Specific function: Unknown

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43903; Mature: 43903

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKSLIPSIRFAGFTDAWERRKLGDLAEFRRGLTYSPRDISTSGIRVLRSSNIDEDSFV
CCCCCCCCCEEECCCCHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCEE
LAEDDVYVKETAVCIPLVEKGDILITAANGSSRLVGKHALIIDDKGKMVHGGFMLLAHPY
EECCCEEEEEEEEEEEEECCCCEEEEECCCCCEEEECEEEEEECCCCEEECCEEEEECCC
THSAFVNALMHAPWYSSFIRTNVAGGNGAIGNLNKSDLEEQDIAATSEQEQERIGSLFAS
HHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHCCCHHHHHCCCHHHHHHHHHHHHH
LDHLITLHQRKYEKLLNIKKSMLDKMFPKNGELFPEVRFAGFTDAWERQKLGDLVESVPF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCH
KQYIASPEPDGKFEIIQQGSEPIIGYGNGIPCEDYAKITIFGDHTVSIYKPQKPFFVATD
HHHHCCCCCCCCCHHEECCCCCEEECCCCCCCCCCEEEEEEECCEEEEECCCCCEEEEEC
GTRLLTARVLDGDFFYFLLERYKPIPEGYKRHYTILIERYGCFPSHREQKLIAIFFRNID
CCEEEEEEEECCHHHHHHHHHCCCCCCHHHCEEEEEEEECCCCCCCCCCHHHHHHHHHHH
HLITLHQRKLEKLQNIKKACLEKMFV
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNEKSLIPSIRFAGFTDAWERRKLGDLAEFRRGLTYSPRDISTSGIRVLRSSNIDEDSFV
CCCCCCCCCEEECCCCHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCEE
LAEDDVYVKETAVCIPLVEKGDILITAANGSSRLVGKHALIIDDKGKMVHGGFMLLAHPY
EECCCEEEEEEEEEEEEECCCCEEEEECCCCCEEEECEEEEEECCCCEEECCEEEEECCC
THSAFVNALMHAPWYSSFIRTNVAGGNGAIGNLNKSDLEEQDIAATSEQEQERIGSLFAS
HHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHCCCHHHHHCCCHHHHHHHHHHHHH
LDHLITLHQRKYEKLLNIKKSMLDKMFPKNGELFPEVRFAGFTDAWERQKLGDLVESVPF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCH
KQYIASPEPDGKFEIIQQGSEPIIGYGNGIPCEDYAKITIFGDHTVSIYKPQKPFFVATD
HHHHCCCCCCCCCHHEECCCCCEEECCCCCCCCCCEEEEEEECCEEEEECCCCCEEEEEC
GTRLLTARVLDGDFFYFLLERYKPIPEGYKRHYTILIERYGCFPSHREQKLIAIFFRNID
CCEEEEEEEECCHHHHHHHHHCCCCCCHHHCEEEEEEEECCCCCCCCCCHHHHHHHHHHH
HLITLHQRKLEKLQNIKKACLEKMFV
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA