Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736376
Identifier: 187736376
GI number: 187736376
Start: 2299388
End: 2299741
Strand: Direct
Name: 187736376
Synonym: Amuc_1893
Alternate gene names: NA
Gene position: 2299388-2299741 (Clockwise)
Preceding gene: 187736375
Following gene: 187736378
Centisome position: 86.31
GC content: 58.47
Gene sequence:
>354_bases ATGCGTATGGAAGACGGCGGAAAAGCGGTGCGGTATGAATGCACCAGATGCGGCGCGTGCTGCCGCTGGGCCGGGGATGT GTGCGTTGAGACGGATGAAATCCGCGAGATTTCCCGTTTCCTGGACATGGACGAACAGGTTTTTATTGACACATGCTGCC GGTTGAGAGCCAACCGGCGCGGATTGTCCATCCGGGACGCGGAAGATGGCGCCTGCATGATGCTGACGAAAGACGGCTGC CGGATCAATCCCGTTAAACCCCGCCAGTGCCGGGATTTTCCCAACAAATGGAATTTTCCCGGCTGGCGGGATTTGTGCCG CGCCAGAGAAGTGGGGGAGGAACGGGAAGCATAA
Upstream 100 bases:
>100_bases CATCGGGAAATTGCCGCAGGATTTTGAACATGCCGTCAATAGCCCGCGATGGAGGAACGCCCATATGAACATAGGCGTCA TCAGGGGAATTTTCACTTAA
Downstream 100 bases:
>100_bases TATGGCCGGAATGCCGCAAGATTCTTTTCTGCTTCCGGCATTATTCCATGGACGGGGTGAAATCCGGCTGGAATCTTGCG TTTTTTACAGGAACTGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MRMEDGGKAVRYECTRCGACCRWAGDVCVETDEIREISRFLDMDEQVFIDTCCRLRANRRGLSIRDAEDGACMMLTKDGC RINPVKPRQCRDFPNKWNFPGWRDLCRAREVGEEREA
Sequences:
>Translated_117_residues MRMEDGGKAVRYECTRCGACCRWAGDVCVETDEIREISRFLDMDEQVFIDTCCRLRANRRGLSIRDAEDGACMMLTKDGC RINPVKPRQCRDFPNKWNFPGWRDLCRAREVGEEREA >Mature_117_residues MRMEDGGKAVRYECTRCGACCRWAGDVCVETDEIREISRFLDMDEQVFIDTCCRLRANRRGLSIRDAEDGACMMLTKDGC RINPVKPRQCRDFPNKWNFPGWRDLCRAREVGEEREA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13618; Mature: 13618
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 13.7 %Cys+Met (Translated Protein) 9.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 13.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMEDGGKAVRYECTRCGACCRWAGDVCVETDEIREISRFLDMDEQVFIDTCCRLRANRR CCCCCCCCEEEEHHHHHHHHHHCCCCEEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC GLSIRDAEDGACMMLTKDGCRINPVKPRQCRDFPNKWNFPGWRDLCRAREVGEEREA CCEEEECCCCEEEEEECCCCEECCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MRMEDGGKAVRYECTRCGACCRWAGDVCVETDEIREISRFLDMDEQVFIDTCCRLRANRR CCCCCCCCEEEEHHHHHHHHHHCCCCEEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC GLSIRDAEDGACMMLTKDGCRINPVKPRQCRDFPNKWNFPGWRDLCRAREVGEEREA CCEEEECCCCEEEEEECCCCEECCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA