Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is queF [H]
Identifier: 187736369
GI number: 187736369
Start: 2290846
End: 2291256
Strand: Reverse
Name: queF [H]
Synonym: Amuc_1886
Alternate gene names: 187736369
Gene position: 2291256-2290846 (Counterclockwise)
Preceding gene: 187736370
Following gene: 187736368
Centisome position: 86.0
GC content: 57.18
Gene sequence:
>411_bases ATGTCCGACGACCATCTGACTCTATTAGGCTCTCAAAGCTCCTTCTTTACCAATCCCGACGACGCCAGGCTGGAATCCTT CCCTAACCGCGGCACGCGTCCCTACACCATCACGCTGGACACCCATGAATTTTCCTCCCTCTGCCCCGTTACCGGTCAAC CGGATTCCTGTCACCTGACGATCACCTACGTTCCGGCGGAAAAGTGCGTGGAAACCAAATCTCTCAAATACTACCTGGCC GCCTACCGCAACTATCCGGCTTTTAATGAACAAATCGTCAACCGCATCACGGATGATCTGGTGGCCGCCATTTCCCCGCG GTGGCTGAAGGTGGAAGGCCGCTTCTCCCCCCGCGGCGGCATCCAGCTGACCGCAACAGCCGAACACAATCCGGAAAACC GCCCCCTGTAA
Upstream 100 bases:
>100_bases ATTTCCATCCCATTCCCTCAACAGGACTTGTACGTGAAAGAATTCCTCGGCGGAGCCCCCGTCCAGGGGACCTGAACATC CATTACCATATACAACAACC
Downstream 100 bases:
>100_bases TCCAGACCATGGACAAAATGGAAACAGCCGTACTGCTCAGCGGGGGATTGGACTCCAGCGTAGCCCTGCACTGGGCCCAC CGGAACCACCGCGTCCGGGT
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase [H]
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSDDHLTLLGSQSSFFTNPDDARLESFPNRGTRPYTITLDTHEFSSLCPVTGQPDSCHLTITYVPAEKCVETKSLKYYLA AYRNYPAFNEQIVNRITDDLVAAISPRWLKVEGRFSPRGGIQLTATAEHNPENRPL
Sequences:
>Translated_136_residues MSDDHLTLLGSQSSFFTNPDDARLESFPNRGTRPYTITLDTHEFSSLCPVTGQPDSCHLTITYVPAEKCVETKSLKYYLA AYRNYPAFNEQIVNRITDDLVAAISPRWLKVEGRFSPRGGIQLTATAEHNPENRPL >Mature_135_residues SDDHLTLLGSQSSFFTNPDDARLESFPNRGTRPYTITLDTHEFSSLCPVTGQPDSCHLTITYVPAEKCVETKSLKYYLAA YRNYPAFNEQIVNRITDDLVAAISPRWLKVEGRFSPRGGIQLTATAEHNPENRPL
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) [H]
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016856 - InterPro: IPR020602 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =1.7.1.13 [H]
Molecular weight: Translated: 15306; Mature: 15175
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDHLTLLGSQSSFFTNPDDARLESFPNRGTRPYTITLDTHEFSSLCPVTGQPDSCHLT CCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE ITYVPAEKCVETKSLKYYLAAYRNYPAFNEQIVNRITDDLVAAISPRWLKVEGRFSPRGG EEEECHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC IQLTATAEHNPENRPL EEEEEECCCCCCCCCC >Mature Secondary Structure SDDHLTLLGSQSSFFTNPDDARLESFPNRGTRPYTITLDTHEFSSLCPVTGQPDSCHLT CCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE ITYVPAEKCVETKSLKYYLAAYRNYPAFNEQIVNRITDDLVAAISPRWLKVEGRFSPRGG EEEECHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC IQLTATAEHNPENRPL EEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA