Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736358
Identifier: 187736358
GI number: 187736358
Start: 2279493
End: 2280725
Strand: Direct
Name: 187736358
Synonym: Amuc_1875
Alternate gene names: NA
Gene position: 2279493-2280725 (Clockwise)
Preceding gene: 187736357
Following gene: 187736359
Centisome position: 85.56
GC content: 59.69
Gene sequence:
>1233_bases ATGAACAGCAATACATCTTCAACAGGCGGGGAACGCCAGGACCGTCCGGGATTCGGCTGGGCCGGGCGTTCCGCTGCCCT TTCCCTGTGGATCATTTCCGTTCTATTATGGTGCGTGCTGATGCGCCAGTCCTTTACGGCCATGCCCTGGGACGACATGA CGGTAGCCGGAGAAAGGTTGCAGGAATTGAGAAGGCCGTTCGCCGCTGCCGGAATGGCCGTAGGGGTCCTTGGCTCCAGC CTCTGTCTGGGGTGCCTGTTCTGGCTCTGCCTGTCTTCACTGACGGGTTCCGGCTGGGGCATTGCGCTGAGAAGGGTGCT GGCGGCGGGTTGCTGGGGGTTTTTACCCGGTGTTTTGGTATTGGCCGGAACGGTCGGCTGCCTGACTACCGTGATTTTTC CGGAAGCAGCCCGCTACTGGGGAGTGGCGGATGTTGCCTCTCCCGGCGTCCAGCCCTTCGGCGTTCTGGATTTGGCTGAC TTCTCATGGTGGAACCCGGCATGGCTGTACGTGCGCGTGGGGAGTATTGCGGTGCTTTCTTGGAGCATGGCCCAGGTATG GGAAACGCTGGTTGCGGAAAAAAATGTCTGGCAGCCTTCCTTCCGCCGGGGCTCTGCCGCCTTCTGCATGGTTGTGACGG TGATGATGCTGGGCCTGCTGGGGATGGACATGCTGGGAGGGACGGGAAAGGTCGTTCTTTCCATGTTCCCCGTATACATG ATTGCATATGTTCTGCTGGTGTCCCTGGCATTCGCTGTGTTGTCTGCCGTGTTCCTGAGGCGGCTGGACGGAGGGAAGGA GCTGCCTTGGCCCCGCCTGGGCGGCATGCTGACGGCTATGGTTCTGGTGAAAGCCTATATTGTGTATTCTCAGTACATGA TTACCTGGTACGCCTCCATTCCGGCTGAAATGTCCTTTTATAACGCAGCCGCTTCCTCCGGCTGGTCCGGAATGTTTGCC GCGGCTCTTGTTCTTCAGCTTCTGCTGCCTTTCCTTATTTTGCTGTTCCCCGCGTTGAGACGCCGGCCGTCCGCGTTGGG CGCTGTATGCGCCGGGGTGCTGTTTGGCTCCCTGCTGGAAGCATGCTGGATGTTCGGCCCCGGACTTGGGCTGGACCCGT CCGCATGGAAGGCATGGCTTCCGCTTGTCCTGCTCTTGGGAGGGATGGCCCTGATCTGCTGTTTTTCCTTCCTGGGGGCA CTGAGCGTCCGCAGGGTATTTCCCGAATCATGA
Upstream 100 bases:
>100_bases ACATTCTCACGGCGCGGGAAATCTGGTGTCTGGTGGCGTTTATCCGCCATTTGCAAGCGCCGCCGGAAGAACCTGCCGTT CAACAAAAGGAACAACATTC
Downstream 100 bases:
>100_bases TGAACCGTACCGCCGCCGTTTTTTTTCTGTTTTCCCGCCGTCCGGGCGAGTATCTCCCCCTGTTCTGGCTGACAGGGGCT TTCGTGCTGGGTTTCCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MNSNTSSTGGERQDRPGFGWAGRSAALSLWIISVLLWCVLMRQSFTAMPWDDMTVAGERLQELRRPFAAAGMAVGVLGSS LCLGCLFWLCLSSLTGSGWGIALRRVLAAGCWGFLPGVLVLAGTVGCLTTVIFPEAARYWGVADVASPGVQPFGVLDLAD FSWWNPAWLYVRVGSIAVLSWSMAQVWETLVAEKNVWQPSFRRGSAAFCMVVTVMMLGLLGMDMLGGTGKVVLSMFPVYM IAYVLLVSLAFAVLSAVFLRRLDGGKELPWPRLGGMLTAMVLVKAYIVYSQYMITWYASIPAEMSFYNAAASSGWSGMFA AALVLQLLLPFLILLFPALRRRPSALGAVCAGVLFGSLLEACWMFGPGLGLDPSAWKAWLPLVLLLGGMALICCFSFLGA LSVRRVFPES
Sequences:
>Translated_410_residues MNSNTSSTGGERQDRPGFGWAGRSAALSLWIISVLLWCVLMRQSFTAMPWDDMTVAGERLQELRRPFAAAGMAVGVLGSS LCLGCLFWLCLSSLTGSGWGIALRRVLAAGCWGFLPGVLVLAGTVGCLTTVIFPEAARYWGVADVASPGVQPFGVLDLAD FSWWNPAWLYVRVGSIAVLSWSMAQVWETLVAEKNVWQPSFRRGSAAFCMVVTVMMLGLLGMDMLGGTGKVVLSMFPVYM IAYVLLVSLAFAVLSAVFLRRLDGGKELPWPRLGGMLTAMVLVKAYIVYSQYMITWYASIPAEMSFYNAAASSGWSGMFA AALVLQLLLPFLILLFPALRRRPSALGAVCAGVLFGSLLEACWMFGPGLGLDPSAWKAWLPLVLLLGGMALICCFSFLGA LSVRRVFPES >Mature_410_residues MNSNTSSTGGERQDRPGFGWAGRSAALSLWIISVLLWCVLMRQSFTAMPWDDMTVAGERLQELRRPFAAAGMAVGVLGSS LCLGCLFWLCLSSLTGSGWGIALRRVLAAGCWGFLPGVLVLAGTVGCLTTVIFPEAARYWGVADVASPGVQPFGVLDLAD FSWWNPAWLYVRVGSIAVLSWSMAQVWETLVAEKNVWQPSFRRGSAAFCMVVTVMMLGLLGMDMLGGTGKVVLSMFPVYM IAYVLLVSLAFAVLSAVFLRRLDGGKELPWPRLGGMLTAMVLVKAYIVYSQYMITWYASIPAEMSFYNAAASSGWSGMFA AALVLQLLLPFLILLFPALRRRPSALGAVCAGVLFGSLLEACWMFGPGLGLDPSAWKAWLPLVLLLGGMALICCFSFLGA LSVRRVFPES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44302; Mature: 44302
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSNTSSTGGERQDRPGFGWAGRSAALSLWIISVLLWCVLMRQSFTAMPWDDMTVAGERL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH QELRRPFAAAGMAVGVLGSSLCLGCLFWLCLSSLTGSGWGIALRRVLAAGCWGFLPGVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LAGTVGCLTTVIFPEAARYWGVADVASPGVQPFGVLDLADFSWWNPAWLYVRVGSIAVLS HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEECCCCCCCCEEEEEEECHHHHHH WSMAQVWETLVAEKNVWQPSFRRGSAAFCMVVTVMMLGLLGMDMLGGTGKVVLSMFPVYM HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH IAYVLLVSLAFAVLSAVFLRRLDGGKELPWPRLGGMLTAMVLVKAYIVYSQYMITWYASI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PAEMSFYNAAASSGWSGMFAAALVLQLLLPFLILLFPALRRRPSALGAVCAGVLFGSLLE CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ACWMFGPGLGLDPSAWKAWLPLVLLLGGMALICCFSFLGALSVRRVFPES HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNSNTSSTGGERQDRPGFGWAGRSAALSLWIISVLLWCVLMRQSFTAMPWDDMTVAGERL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH QELRRPFAAAGMAVGVLGSSLCLGCLFWLCLSSLTGSGWGIALRRVLAAGCWGFLPGVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LAGTVGCLTTVIFPEAARYWGVADVASPGVQPFGVLDLADFSWWNPAWLYVRVGSIAVLS HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEECCCCCCCCEEEEEEECHHHHHH WSMAQVWETLVAEKNVWQPSFRRGSAAFCMVVTVMMLGLLGMDMLGGTGKVVLSMFPVYM HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH IAYVLLVSLAFAVLSAVFLRRLDGGKELPWPRLGGMLTAMVLVKAYIVYSQYMITWYASI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PAEMSFYNAAASSGWSGMFAAALVLQLLLPFLILLFPALRRRPSALGAVCAGVLFGSLLE CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ACWMFGPGLGLDPSAWKAWLPLVLLLGGMALICCFSFLGALSVRRVFPES HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA