Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736359

Identifier: 187736359

GI number: 187736359

Start: 2280722

End: 2283049

Strand: Direct

Name: 187736359

Synonym: Amuc_1876

Alternate gene names: NA

Gene position: 2280722-2283049 (Clockwise)

Preceding gene: 187736358

Following gene: 187736362

Centisome position: 85.61

GC content: 64.13

Gene sequence:

>2328_bases
ATGATGAACCGTACCGCCGCCGTTTTTTTTCTGTTTTCCCGCCGTCCGGGCGAGTATCTCCCCCTGTTCTGGCTGACAGG
GGCTTTCGTGCTGGGTTTCCTGTGGTCGCTGGCGTACGCTTCCGGTCTGGTGGCGGAGGAGCCTTTGCCGTGGCCGGCCG
GCCGCCTCATGTTCGCATTCTACGGCATGCTGGTGTACGGCTGGGCCCTCCCCGTCCTGTTTTCCTTTGCGGCGGGAAGC
AGGAGCCGGTGGATGAAACCCGTAGAATGGCTCTGGCATGCCTGCGTTGCGTTGGGGTTGGCGACTATTGCCGCGGGAAA
TGGGAGCGGCGTGCTCCTGATGCCTTTTGACTGGTGGGTTTGCCCGGTTTTTGCCTTCCTTGCCGCAGGGGCGGCGTGCG
TCGCATGGTTCCGTCCGTTTCCGTGGACTGTACGGCTGTTGTTCAGTTCCTCCGCCGGGTGTGTGGCCGCGGCCCTTTGG
GCGTTGGGACATACGCAGGCATTGTCCATGAATGGCCTGCTGGATGTTTCCGCCCTGGGAGGAAGCCTGTCCTGCGGGCT
GATGTTTGCCGCCCTGGGAGCGGCGGCGCTCCGCCTGGATATGGCGCTGGGGAGGGCAGCCGGAATCCTGTCCGTCTGGA
TGGCCCTGGTGCTGGCGGCGGCTCCGGTGATTGGCGGGCTGGGGGGGCTTCAGGGGGTTCCCGTGCCGTGGATGTTGGTG
GAGGCCGGTACCGCCTGGTTTTGGTGCGCCGTTCTTCCCGCCGTCCTGGCGGTGGCGCGTTTTTGGATAAAATCCGGTAC
GAAGACCGGAATATGGGTGAAGACCGGAGTTTCCCTGCTTGCCTTGCTGGCGGCATGGAACGTGTTTGTTGTGGGTGCGC
CTGAGCTGATGCAGTTTTCCCTGTCTGCATGGCATGAACCGGAATTATGGATTCTGCTGGGGGCCGGAGTTTTGATGATG
GCAGGGGGGAAGGCCCCCGGACATTTCCCTGCGGCATGGCGGCTGTTGGGCGCAGGCGTCTGCGGCGTGCTTCTGGCGTA
TGCCGTGGGCGTGCTTGCCGCCCTGGATGTCCAGGCTTTTCCTGAGGCCCGTCGCGCGGAGCTGATGAGCGGCTGGGTGG
GCATGGCTGCCTGCATCCACGCCGTAGCCATGGCTTTTTGCCTGGCGGGCAGCCTCTGCCTGTGGCGGCCAGCGGGAGCG
GAAGACGGAGGCCGGGAGTCTTCCCCTCCGTTTTTGCGGCGTTTCTTCTTCATTTCAGCCGTAGCGGCGGCTTTGGCGCT
GGCGACGGCTGCGGCCGTTGTTCTGCATGCTCCGCCTCCGGATACCATGGAGGTTAGGAGGCACGTTCATGATGCGGAAG
GTTCCGGCATTTACGCCGCAGAGGGGTGTGCCCTGTGCCATACCCAGATTATCCGGCGTTCCCTGTCCGGAAAGGACTGG
CAGACGGCGATTGACCGCGGCACGGATCCTGATTTCCCCTACCGGGTCAGTGAACCGGAAGACATGGATGCCGAATTCAA
CAGGGAAGGGGCTCCGCAGGCGGGCGTGGCGGCCATAGGCCCGGACCTGAGCAATGCGGCGGAATACGCCGCCGGGAGGT
TGGAATATGAAGACGCCGTATCCGGCGGCACGCGCCGCGCCGCGCAGGTGCGGGAATGGCTGGCCCTGCATCTTTACAAC
CCGCGGGAATTGCAGTTCAACAAGCCCTGGACCATGTGTCCGGCCATGCCCGGACTGTTTGAGGAACGCCCGGTGGAAGG
GAACGCCCCCTCCACGGCTGCCCTGCCTGTCCGGATGGAACGGGGCCGGGAGCTGGTGCCTTCCCCGCGCGGGGAGCGCC
TGTTGAACTACCTGGAGTCCCTGCGGAGGGTGGAACCCTCCCTGAAGCGCGACCAAATCCATTCCTTCCCGGCCCTGTCC
CATATTCACCCGGATTATGCCGCGCATCCTCCCGCCGTGGACATGGAACGCCTGAAGAAAGCCCGCGCCGCCGCCGTGAT
GGAAAAGGGCAGGGGCGTATACCTTTCCAAATGCGCCATCTGCCACGGCAACGACGGCATGGGGGACAAGGTGACCTATC
CTCCCCTGGCCGGGTCCGAGTGGCTGAAGGAAAAGCCTGATGTGGAAATCGTCAGGATCATCCTCCAGGGACTGACCGGA
CCCATCACGGTGAATGGAAAGGAATGGGATTCCACCATGCTGCCGCCCGGCGTCACGGATTCCCGCGACCTGGCGAACCT
GCTCACATTCCTGCGCCGCCAGTTCGGCGGGGTGGAGAAGGCGGCCTATACGCCGGAGCAGGTGGACGCCATCCGCCGGG
ATCTGTGA

Upstream 100 bases:

>100_bases
AGGCATGGCTTCCGCTTGTCCTGCTCTTGGGAGGGATGGCCCTGATCTGCTGTTTTTCCTTCCTGGGGGCACTGAGCGTC
CGCAGGGTATTTCCCGAATC

Downstream 100 bases:

>100_bases
CGGGAGGGCCCCCGATTACAACGTTTCATGCTCCTTGCCCCGGGAACGGAAATGGCTGCAAATGCCATTCTATGAATTTA
GATGATACGTCCGCCCTTTC

Product: hypothetical protein

Products: nitrite; ferrocytochrome c; H+

Alternate protein names: Cytochrome C Oxidase Mono-Heme Subunit/FixO; Cytochrome C Subfamily; Nitrite Reductase Copper-Containing; Anaerobically Induced Outer Membrane Transmembrane Protein; Cytochrome C Family Protein; Outer Membrane Nitrite Reductase; L-Sorbosone Dehydrogenase; Anaerobically Induced Transmembrane Protein

Number of amino acids: Translated: 775; Mature: 775

Protein sequence:

>775_residues
MMNRTAAVFFLFSRRPGEYLPLFWLTGAFVLGFLWSLAYASGLVAEEPLPWPAGRLMFAFYGMLVYGWALPVLFSFAAGS
RSRWMKPVEWLWHACVALGLATIAAGNGSGVLLMPFDWWVCPVFAFLAAGAACVAWFRPFPWTVRLLFSSSAGCVAAALW
ALGHTQALSMNGLLDVSALGGSLSCGLMFAALGAAALRLDMALGRAAGILSVWMALVLAAAPVIGGLGGLQGVPVPWMLV
EAGTAWFWCAVLPAVLAVARFWIKSGTKTGIWVKTGVSLLALLAAWNVFVVGAPELMQFSLSAWHEPELWILLGAGVLMM
AGGKAPGHFPAAWRLLGAGVCGVLLAYAVGVLAALDVQAFPEARRAELMSGWVGMAACIHAVAMAFCLAGSLCLWRPAGA
EDGGRESSPPFLRRFFFISAVAAALALATAAAVVLHAPPPDTMEVRRHVHDAEGSGIYAAEGCALCHTQIIRRSLSGKDW
QTAIDRGTDPDFPYRVSEPEDMDAEFNREGAPQAGVAAIGPDLSNAAEYAAGRLEYEDAVSGGTRRAAQVREWLALHLYN
PRELQFNKPWTMCPAMPGLFEERPVEGNAPSTAALPVRMERGRELVPSPRGERLLNYLESLRRVEPSLKRDQIHSFPALS
HIHPDYAAHPPAVDMERLKKARAAAVMEKGRGVYLSKCAICHGNDGMGDKVTYPPLAGSEWLKEKPDVEIVRIILQGLTG
PITVNGKEWDSTMLPPGVTDSRDLANLLTFLRRQFGGVEKAAYTPEQVDAIRRDL

Sequences:

>Translated_775_residues
MMNRTAAVFFLFSRRPGEYLPLFWLTGAFVLGFLWSLAYASGLVAEEPLPWPAGRLMFAFYGMLVYGWALPVLFSFAAGS
RSRWMKPVEWLWHACVALGLATIAAGNGSGVLLMPFDWWVCPVFAFLAAGAACVAWFRPFPWTVRLLFSSSAGCVAAALW
ALGHTQALSMNGLLDVSALGGSLSCGLMFAALGAAALRLDMALGRAAGILSVWMALVLAAAPVIGGLGGLQGVPVPWMLV
EAGTAWFWCAVLPAVLAVARFWIKSGTKTGIWVKTGVSLLALLAAWNVFVVGAPELMQFSLSAWHEPELWILLGAGVLMM
AGGKAPGHFPAAWRLLGAGVCGVLLAYAVGVLAALDVQAFPEARRAELMSGWVGMAACIHAVAMAFCLAGSLCLWRPAGA
EDGGRESSPPFLRRFFFISAVAAALALATAAAVVLHAPPPDTMEVRRHVHDAEGSGIYAAEGCALCHTQIIRRSLSGKDW
QTAIDRGTDPDFPYRVSEPEDMDAEFNREGAPQAGVAAIGPDLSNAAEYAAGRLEYEDAVSGGTRRAAQVREWLALHLYN
PRELQFNKPWTMCPAMPGLFEERPVEGNAPSTAALPVRMERGRELVPSPRGERLLNYLESLRRVEPSLKRDQIHSFPALS
HIHPDYAAHPPAVDMERLKKARAAAVMEKGRGVYLSKCAICHGNDGMGDKVTYPPLAGSEWLKEKPDVEIVRIILQGLTG
PITVNGKEWDSTMLPPGVTDSRDLANLLTFLRRQFGGVEKAAYTPEQVDAIRRDL
>Mature_775_residues
MMNRTAAVFFLFSRRPGEYLPLFWLTGAFVLGFLWSLAYASGLVAEEPLPWPAGRLMFAFYGMLVYGWALPVLFSFAAGS
RSRWMKPVEWLWHACVALGLATIAAGNGSGVLLMPFDWWVCPVFAFLAAGAACVAWFRPFPWTVRLLFSSSAGCVAAALW
ALGHTQALSMNGLLDVSALGGSLSCGLMFAALGAAALRLDMALGRAAGILSVWMALVLAAAPVIGGLGGLQGVPVPWMLV
EAGTAWFWCAVLPAVLAVARFWIKSGTKTGIWVKTGVSLLALLAAWNVFVVGAPELMQFSLSAWHEPELWILLGAGVLMM
AGGKAPGHFPAAWRLLGAGVCGVLLAYAVGVLAALDVQAFPEARRAELMSGWVGMAACIHAVAMAFCLAGSLCLWRPAGA
EDGGRESSPPFLRRFFFISAVAAALALATAAAVVLHAPPPDTMEVRRHVHDAEGSGIYAAEGCALCHTQIIRRSLSGKDW
QTAIDRGTDPDFPYRVSEPEDMDAEFNREGAPQAGVAAIGPDLSNAAEYAAGRLEYEDAVSGGTRRAAQVREWLALHLYN
PRELQFNKPWTMCPAMPGLFEERPVEGNAPSTAALPVRMERGRELVPSPRGERLLNYLESLRRVEPSLKRDQIHSFPALS
HIHPDYAAHPPAVDMERLKKARAAAVMEKGRGVYLSKCAICHGNDGMGDKVTYPPLAGSEWLKEKPDVEIVRIILQGLTG
PITVNGKEWDSTMLPPGVTDSRDLANLLTFLRRQFGGVEKAAYTPEQVDAIRRDL

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.7.2.1

Molecular weight: Translated: 83517; Mature: 83517

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNRTAAVFFLFSRRPGEYLPLFWLTGAFVLGFLWSLAYASGLVAEEPLPWPAGRLMFAF
CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
YGMLVYGWALPVLFSFAAGSRSRWMKPVEWLWHACVALGLATIAAGNGSGVLLMPFDWWV
HHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHH
CPVFAFLAAGAACVAWFRPFPWTVRLLFSSSAGCVAAALWALGHTQALSMNGLLDVSALG
HHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHHHCCHHHCCCCCCEEHHHCC
GSLSCGLMFAALGAAALRLDMALGRAAGILSVWMALVLAAAPVIGGLGGLQGVPVPWMLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
EAGTAWFWCAVLPAVLAVARFWIKSGTKTGIWVKTGVSLLALLAAWNVFVVGAPELMQFS
ECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCEEEECCHHHHHHH
LSAWHEPELWILLGAGVLMMAGGKAPGHFPAAWRLLGAGVCGVLLAYAVGVLAALDVQAF
HHCCCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PEARRAELMSGWVGMAACIHAVAMAFCLAGSLCLWRPAGAEDGGRESSPPFLRRFFFISA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCHHHHHHHHHHH
VAAALALATAAAVVLHAPPPDTMEVRRHVHDAEGSGIYAAEGCALCHTQIIRRSLSGKDW
HHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCCCH
QTAIDRGTDPDFPYRVSEPEDMDAEFNREGAPQAGVAAIGPDLSNAAEYAAGRLEYEDAV
HHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCHHHHH
SGGTRRAAQVREWLALHLYNPRELQFNKPWTMCPAMPGLFEERPVEGNAPSTAALPVRME
CCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEHH
RGRELVPSPRGERLLNYLESLRRVEPSLKRDQIHSFPALSHIHPDYAAHPPAVDMERLKK
CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHH
ARAAAVMEKGRGVYLSKCAICHGNDGMGDKVTYPPLAGSEWLKEKPDVEIVRIILQGLTG
HHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCC
PITVNGKEWDSTMLPPGVTDSRDLANLLTFLRRQFGGVEKAAYTPEQVDAIRRDL
CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MMNRTAAVFFLFSRRPGEYLPLFWLTGAFVLGFLWSLAYASGLVAEEPLPWPAGRLMFAF
CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
YGMLVYGWALPVLFSFAAGSRSRWMKPVEWLWHACVALGLATIAAGNGSGVLLMPFDWWV
HHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHH
CPVFAFLAAGAACVAWFRPFPWTVRLLFSSSAGCVAAALWALGHTQALSMNGLLDVSALG
HHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHHHCCHHHCCCCCCEEHHHCC
GSLSCGLMFAALGAAALRLDMALGRAAGILSVWMALVLAAAPVIGGLGGLQGVPVPWMLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
EAGTAWFWCAVLPAVLAVARFWIKSGTKTGIWVKTGVSLLALLAAWNVFVVGAPELMQFS
ECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCEEEECCHHHHHHH
LSAWHEPELWILLGAGVLMMAGGKAPGHFPAAWRLLGAGVCGVLLAYAVGVLAALDVQAF
HHCCCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PEARRAELMSGWVGMAACIHAVAMAFCLAGSLCLWRPAGAEDGGRESSPPFLRRFFFISA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCHHHHHHHHHHH
VAAALALATAAAVVLHAPPPDTMEVRRHVHDAEGSGIYAAEGCALCHTQIIRRSLSGKDW
HHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCCCH
QTAIDRGTDPDFPYRVSEPEDMDAEFNREGAPQAGVAAIGPDLSNAAEYAAGRLEYEDAV
HHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCHHHHH
SGGTRRAAQVREWLALHLYNPRELQFNKPWTMCPAMPGLFEERPVEGNAPSTAALPVRME
CCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEHH
RGRELVPSPRGERLLNYLESLRRVEPSLKRDQIHSFPALSHIHPDYAAHPPAVDMERLKK
CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHH
ARAAAVMEKGRGVYLSKCAICHGNDGMGDKVTYPPLAGSEWLKEKPDVEIVRIILQGLTG
HHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCC
PITVNGKEWDSTMLPPGVTDSRDLANLLTFLRRQFGGVEKAAYTPEQVDAIRRDL
CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: nitric oxide; H2O; ferricytochrome c

Specific reaction: nitric oxide + H2O + ferricytochrome c = nitrite + ferrocytochrome c + 2 H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA