Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736359
Identifier: 187736359
GI number: 187736359
Start: 2280722
End: 2283049
Strand: Direct
Name: 187736359
Synonym: Amuc_1876
Alternate gene names: NA
Gene position: 2280722-2283049 (Clockwise)
Preceding gene: 187736358
Following gene: 187736362
Centisome position: 85.61
GC content: 64.13
Gene sequence:
>2328_bases ATGATGAACCGTACCGCCGCCGTTTTTTTTCTGTTTTCCCGCCGTCCGGGCGAGTATCTCCCCCTGTTCTGGCTGACAGG GGCTTTCGTGCTGGGTTTCCTGTGGTCGCTGGCGTACGCTTCCGGTCTGGTGGCGGAGGAGCCTTTGCCGTGGCCGGCCG GCCGCCTCATGTTCGCATTCTACGGCATGCTGGTGTACGGCTGGGCCCTCCCCGTCCTGTTTTCCTTTGCGGCGGGAAGC AGGAGCCGGTGGATGAAACCCGTAGAATGGCTCTGGCATGCCTGCGTTGCGTTGGGGTTGGCGACTATTGCCGCGGGAAA TGGGAGCGGCGTGCTCCTGATGCCTTTTGACTGGTGGGTTTGCCCGGTTTTTGCCTTCCTTGCCGCAGGGGCGGCGTGCG TCGCATGGTTCCGTCCGTTTCCGTGGACTGTACGGCTGTTGTTCAGTTCCTCCGCCGGGTGTGTGGCCGCGGCCCTTTGG GCGTTGGGACATACGCAGGCATTGTCCATGAATGGCCTGCTGGATGTTTCCGCCCTGGGAGGAAGCCTGTCCTGCGGGCT GATGTTTGCCGCCCTGGGAGCGGCGGCGCTCCGCCTGGATATGGCGCTGGGGAGGGCAGCCGGAATCCTGTCCGTCTGGA TGGCCCTGGTGCTGGCGGCGGCTCCGGTGATTGGCGGGCTGGGGGGGCTTCAGGGGGTTCCCGTGCCGTGGATGTTGGTG GAGGCCGGTACCGCCTGGTTTTGGTGCGCCGTTCTTCCCGCCGTCCTGGCGGTGGCGCGTTTTTGGATAAAATCCGGTAC GAAGACCGGAATATGGGTGAAGACCGGAGTTTCCCTGCTTGCCTTGCTGGCGGCATGGAACGTGTTTGTTGTGGGTGCGC CTGAGCTGATGCAGTTTTCCCTGTCTGCATGGCATGAACCGGAATTATGGATTCTGCTGGGGGCCGGAGTTTTGATGATG GCAGGGGGGAAGGCCCCCGGACATTTCCCTGCGGCATGGCGGCTGTTGGGCGCAGGCGTCTGCGGCGTGCTTCTGGCGTA TGCCGTGGGCGTGCTTGCCGCCCTGGATGTCCAGGCTTTTCCTGAGGCCCGTCGCGCGGAGCTGATGAGCGGCTGGGTGG GCATGGCTGCCTGCATCCACGCCGTAGCCATGGCTTTTTGCCTGGCGGGCAGCCTCTGCCTGTGGCGGCCAGCGGGAGCG GAAGACGGAGGCCGGGAGTCTTCCCCTCCGTTTTTGCGGCGTTTCTTCTTCATTTCAGCCGTAGCGGCGGCTTTGGCGCT GGCGACGGCTGCGGCCGTTGTTCTGCATGCTCCGCCTCCGGATACCATGGAGGTTAGGAGGCACGTTCATGATGCGGAAG GTTCCGGCATTTACGCCGCAGAGGGGTGTGCCCTGTGCCATACCCAGATTATCCGGCGTTCCCTGTCCGGAAAGGACTGG CAGACGGCGATTGACCGCGGCACGGATCCTGATTTCCCCTACCGGGTCAGTGAACCGGAAGACATGGATGCCGAATTCAA CAGGGAAGGGGCTCCGCAGGCGGGCGTGGCGGCCATAGGCCCGGACCTGAGCAATGCGGCGGAATACGCCGCCGGGAGGT TGGAATATGAAGACGCCGTATCCGGCGGCACGCGCCGCGCCGCGCAGGTGCGGGAATGGCTGGCCCTGCATCTTTACAAC CCGCGGGAATTGCAGTTCAACAAGCCCTGGACCATGTGTCCGGCCATGCCCGGACTGTTTGAGGAACGCCCGGTGGAAGG GAACGCCCCCTCCACGGCTGCCCTGCCTGTCCGGATGGAACGGGGCCGGGAGCTGGTGCCTTCCCCGCGCGGGGAGCGCC TGTTGAACTACCTGGAGTCCCTGCGGAGGGTGGAACCCTCCCTGAAGCGCGACCAAATCCATTCCTTCCCGGCCCTGTCC CATATTCACCCGGATTATGCCGCGCATCCTCCCGCCGTGGACATGGAACGCCTGAAGAAAGCCCGCGCCGCCGCCGTGAT GGAAAAGGGCAGGGGCGTATACCTTTCCAAATGCGCCATCTGCCACGGCAACGACGGCATGGGGGACAAGGTGACCTATC CTCCCCTGGCCGGGTCCGAGTGGCTGAAGGAAAAGCCTGATGTGGAAATCGTCAGGATCATCCTCCAGGGACTGACCGGA CCCATCACGGTGAATGGAAAGGAATGGGATTCCACCATGCTGCCGCCCGGCGTCACGGATTCCCGCGACCTGGCGAACCT GCTCACATTCCTGCGCCGCCAGTTCGGCGGGGTGGAGAAGGCGGCCTATACGCCGGAGCAGGTGGACGCCATCCGCCGGG ATCTGTGA
Upstream 100 bases:
>100_bases AGGCATGGCTTCCGCTTGTCCTGCTCTTGGGAGGGATGGCCCTGATCTGCTGTTTTTCCTTCCTGGGGGCACTGAGCGTC CGCAGGGTATTTCCCGAATC
Downstream 100 bases:
>100_bases CGGGAGGGCCCCCGATTACAACGTTTCATGCTCCTTGCCCCGGGAACGGAAATGGCTGCAAATGCCATTCTATGAATTTA GATGATACGTCCGCCCTTTC
Product: hypothetical protein
Products: nitrite; ferrocytochrome c; H+
Alternate protein names: Cytochrome C Oxidase Mono-Heme Subunit/FixO; Cytochrome C Subfamily; Nitrite Reductase Copper-Containing; Anaerobically Induced Outer Membrane Transmembrane Protein; Cytochrome C Family Protein; Outer Membrane Nitrite Reductase; L-Sorbosone Dehydrogenase; Anaerobically Induced Transmembrane Protein
Number of amino acids: Translated: 775; Mature: 775
Protein sequence:
>775_residues MMNRTAAVFFLFSRRPGEYLPLFWLTGAFVLGFLWSLAYASGLVAEEPLPWPAGRLMFAFYGMLVYGWALPVLFSFAAGS RSRWMKPVEWLWHACVALGLATIAAGNGSGVLLMPFDWWVCPVFAFLAAGAACVAWFRPFPWTVRLLFSSSAGCVAAALW ALGHTQALSMNGLLDVSALGGSLSCGLMFAALGAAALRLDMALGRAAGILSVWMALVLAAAPVIGGLGGLQGVPVPWMLV EAGTAWFWCAVLPAVLAVARFWIKSGTKTGIWVKTGVSLLALLAAWNVFVVGAPELMQFSLSAWHEPELWILLGAGVLMM AGGKAPGHFPAAWRLLGAGVCGVLLAYAVGVLAALDVQAFPEARRAELMSGWVGMAACIHAVAMAFCLAGSLCLWRPAGA EDGGRESSPPFLRRFFFISAVAAALALATAAAVVLHAPPPDTMEVRRHVHDAEGSGIYAAEGCALCHTQIIRRSLSGKDW QTAIDRGTDPDFPYRVSEPEDMDAEFNREGAPQAGVAAIGPDLSNAAEYAAGRLEYEDAVSGGTRRAAQVREWLALHLYN PRELQFNKPWTMCPAMPGLFEERPVEGNAPSTAALPVRMERGRELVPSPRGERLLNYLESLRRVEPSLKRDQIHSFPALS HIHPDYAAHPPAVDMERLKKARAAAVMEKGRGVYLSKCAICHGNDGMGDKVTYPPLAGSEWLKEKPDVEIVRIILQGLTG PITVNGKEWDSTMLPPGVTDSRDLANLLTFLRRQFGGVEKAAYTPEQVDAIRRDL
Sequences:
>Translated_775_residues MMNRTAAVFFLFSRRPGEYLPLFWLTGAFVLGFLWSLAYASGLVAEEPLPWPAGRLMFAFYGMLVYGWALPVLFSFAAGS RSRWMKPVEWLWHACVALGLATIAAGNGSGVLLMPFDWWVCPVFAFLAAGAACVAWFRPFPWTVRLLFSSSAGCVAAALW ALGHTQALSMNGLLDVSALGGSLSCGLMFAALGAAALRLDMALGRAAGILSVWMALVLAAAPVIGGLGGLQGVPVPWMLV EAGTAWFWCAVLPAVLAVARFWIKSGTKTGIWVKTGVSLLALLAAWNVFVVGAPELMQFSLSAWHEPELWILLGAGVLMM AGGKAPGHFPAAWRLLGAGVCGVLLAYAVGVLAALDVQAFPEARRAELMSGWVGMAACIHAVAMAFCLAGSLCLWRPAGA EDGGRESSPPFLRRFFFISAVAAALALATAAAVVLHAPPPDTMEVRRHVHDAEGSGIYAAEGCALCHTQIIRRSLSGKDW QTAIDRGTDPDFPYRVSEPEDMDAEFNREGAPQAGVAAIGPDLSNAAEYAAGRLEYEDAVSGGTRRAAQVREWLALHLYN PRELQFNKPWTMCPAMPGLFEERPVEGNAPSTAALPVRMERGRELVPSPRGERLLNYLESLRRVEPSLKRDQIHSFPALS HIHPDYAAHPPAVDMERLKKARAAAVMEKGRGVYLSKCAICHGNDGMGDKVTYPPLAGSEWLKEKPDVEIVRIILQGLTG PITVNGKEWDSTMLPPGVTDSRDLANLLTFLRRQFGGVEKAAYTPEQVDAIRRDL >Mature_775_residues MMNRTAAVFFLFSRRPGEYLPLFWLTGAFVLGFLWSLAYASGLVAEEPLPWPAGRLMFAFYGMLVYGWALPVLFSFAAGS RSRWMKPVEWLWHACVALGLATIAAGNGSGVLLMPFDWWVCPVFAFLAAGAACVAWFRPFPWTVRLLFSSSAGCVAAALW ALGHTQALSMNGLLDVSALGGSLSCGLMFAALGAAALRLDMALGRAAGILSVWMALVLAAAPVIGGLGGLQGVPVPWMLV EAGTAWFWCAVLPAVLAVARFWIKSGTKTGIWVKTGVSLLALLAAWNVFVVGAPELMQFSLSAWHEPELWILLGAGVLMM AGGKAPGHFPAAWRLLGAGVCGVLLAYAVGVLAALDVQAFPEARRAELMSGWVGMAACIHAVAMAFCLAGSLCLWRPAGA EDGGRESSPPFLRRFFFISAVAAALALATAAAVVLHAPPPDTMEVRRHVHDAEGSGIYAAEGCALCHTQIIRRSLSGKDW QTAIDRGTDPDFPYRVSEPEDMDAEFNREGAPQAGVAAIGPDLSNAAEYAAGRLEYEDAVSGGTRRAAQVREWLALHLYN PRELQFNKPWTMCPAMPGLFEERPVEGNAPSTAALPVRMERGRELVPSPRGERLLNYLESLRRVEPSLKRDQIHSFPALS HIHPDYAAHPPAVDMERLKKARAAAVMEKGRGVYLSKCAICHGNDGMGDKVTYPPLAGSEWLKEKPDVEIVRIILQGLTG PITVNGKEWDSTMLPPGVTDSRDLANLLTFLRRQFGGVEKAAYTPEQVDAIRRDL
Specific function: Unknown
COG id: COG2010
COG function: function code C; Cytochrome c, mono- and diheme variants
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.7.2.1
Molecular weight: Translated: 83517; Mature: 83517
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNRTAAVFFLFSRRPGEYLPLFWLTGAFVLGFLWSLAYASGLVAEEPLPWPAGRLMFAF CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH YGMLVYGWALPVLFSFAAGSRSRWMKPVEWLWHACVALGLATIAAGNGSGVLLMPFDWWV HHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHH CPVFAFLAAGAACVAWFRPFPWTVRLLFSSSAGCVAAALWALGHTQALSMNGLLDVSALG HHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHHHCCHHHCCCCCCEEHHHCC GSLSCGLMFAALGAAALRLDMALGRAAGILSVWMALVLAAAPVIGGLGGLQGVPVPWMLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE EAGTAWFWCAVLPAVLAVARFWIKSGTKTGIWVKTGVSLLALLAAWNVFVVGAPELMQFS ECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCEEEECCHHHHHHH LSAWHEPELWILLGAGVLMMAGGKAPGHFPAAWRLLGAGVCGVLLAYAVGVLAALDVQAF HHCCCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PEARRAELMSGWVGMAACIHAVAMAFCLAGSLCLWRPAGAEDGGRESSPPFLRRFFFISA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCHHHHHHHHHHH VAAALALATAAAVVLHAPPPDTMEVRRHVHDAEGSGIYAAEGCALCHTQIIRRSLSGKDW HHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCCCH QTAIDRGTDPDFPYRVSEPEDMDAEFNREGAPQAGVAAIGPDLSNAAEYAAGRLEYEDAV HHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCHHHHH SGGTRRAAQVREWLALHLYNPRELQFNKPWTMCPAMPGLFEERPVEGNAPSTAALPVRME CCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEHH RGRELVPSPRGERLLNYLESLRRVEPSLKRDQIHSFPALSHIHPDYAAHPPAVDMERLKK CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHH ARAAAVMEKGRGVYLSKCAICHGNDGMGDKVTYPPLAGSEWLKEKPDVEIVRIILQGLTG HHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCC PITVNGKEWDSTMLPPGVTDSRDLANLLTFLRRQFGGVEKAAYTPEQVDAIRRDL CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCC >Mature Secondary Structure MMNRTAAVFFLFSRRPGEYLPLFWLTGAFVLGFLWSLAYASGLVAEEPLPWPAGRLMFAF CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH YGMLVYGWALPVLFSFAAGSRSRWMKPVEWLWHACVALGLATIAAGNGSGVLLMPFDWWV HHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHH CPVFAFLAAGAACVAWFRPFPWTVRLLFSSSAGCVAAALWALGHTQALSMNGLLDVSALG HHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHHHCCHHHCCCCCCEEHHHCC GSLSCGLMFAALGAAALRLDMALGRAAGILSVWMALVLAAAPVIGGLGGLQGVPVPWMLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE EAGTAWFWCAVLPAVLAVARFWIKSGTKTGIWVKTGVSLLALLAAWNVFVVGAPELMQFS ECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCEEEECCHHHHHHH LSAWHEPELWILLGAGVLMMAGGKAPGHFPAAWRLLGAGVCGVLLAYAVGVLAALDVQAF HHCCCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PEARRAELMSGWVGMAACIHAVAMAFCLAGSLCLWRPAGAEDGGRESSPPFLRRFFFISA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCHHHHHHHHHHH VAAALALATAAAVVLHAPPPDTMEVRRHVHDAEGSGIYAAEGCALCHTQIIRRSLSGKDW HHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCCCH QTAIDRGTDPDFPYRVSEPEDMDAEFNREGAPQAGVAAIGPDLSNAAEYAAGRLEYEDAV HHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCHHHHH SGGTRRAAQVREWLALHLYNPRELQFNKPWTMCPAMPGLFEERPVEGNAPSTAALPVRME CCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEHH RGRELVPSPRGERLLNYLESLRRVEPSLKRDQIHSFPALSHIHPDYAAHPPAVDMERLKK CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHH ARAAAVMEKGRGVYLSKCAICHGNDGMGDKVTYPPLAGSEWLKEKPDVEIVRIILQGLTG HHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCC PITVNGKEWDSTMLPPGVTDSRDLANLLTFLRRQFGGVEKAAYTPEQVDAIRRDL CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nitric oxide; H2O; ferricytochrome c
Specific reaction: nitric oxide + H2O + ferricytochrome c = nitrite + ferrocytochrome c + 2 H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA