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The map label for this gene is yejB [H]

Identifier: 187736338

GI number: 187736338

Start: 2256435

End: 2257823

Strand: Reverse

Name: yejB [H]

Synonym: Amuc_1855

Alternate gene names: 187736338

Gene position: 2257823-2256435 (Counterclockwise)

Preceding gene: 187736339

Following gene: 187736337

Centisome position: 84.75

GC content: 54.72

Gene sequence:

>1389_bases
ATGAAGACCTATATCATCAGACGACTCCTTCTCATGCCCTTGACGCTCCTGGGGGTTACGTTTCTCGTCTTTTGCATAAC
CCGTTTTGTTCCGGGAGGTCCCATTGAGCAGATGATGCAGCAGCAAAGCATGAGCGCCCTGTCCGGACAGAAAGCCGGCT
CCCAGCGCGGCGACAATAACCTGAGTGAAGCGGATATGGAGCGGCTGGAAGAGCAGTACAGCCTGCAGGAGCCCATCATC
ACGGCTTATCTGCAATGGCTGGGCGTGCTGCCCAAAAAGATTTTCATTTCCCGTGAGGAATTCGGGGAAATCGGCGGAGC
GGGAGAGGGAGACAAGGAAGATGAATATTCCGGCATTTCCGATACGCATACACGGATCAATCTGAATGAAACAGGAGAAC
AAGTCGTCGTAGTTCGCCAGGACAAGGATTCCGGCAGCGTGAAAGATGCTTTCTTTTCCGGCACGCCGTCCCGGAAAGCC
GCTTCAGAAGGCTGGACCGTGGATATAGAATCCCCCATGGACCGCGCGGAACGCTGGGCGCGCCGCATGAGGCAGACGGA
TAATACGGAGGCCGTCCGCGACAAGGCTCGGGGCTATGCCTGGCGTGCCGTAATGTACAAGACCAGCTTTGACGGGCTGC
TCCAGGGAACTATGGGCAACTCATTTAAGTACAATGAACCCGTATGGGACATGATTAAGGAGCGCATTCCCGTTTCCCTG
TACTTCGGCATCCTGAGCGCCATTATTACCTATTCCGTCTGCATTCCCCTTGGGGTAGTAAAGGCAATCCGCCATAAAAG
CCTGGTGGACAACATCTCTTCCGTCCTGATTTTCCTGGGGTACTCCGTGCCTGGGTTCGCCCTGGGAGCCGTACTGGTGG
TGTATCTGGGCGCGCGGCTGGAATGGTTCCCTCTCTGCGGGCTTACGTCTCCGGACTTTGCGGACATGGGGTTCTGGCAA
CAGGCCGGAGACCTGCTGCACCATACGGTGCTCCCCCTGATTTGTTATGTAGTAAGTTCCTTTGCCATCACCACCATGAT
GATGAAAAACAACCTGATGGACAATCTTTCCGCGGACTACATCAGGACAGCCATGGCCAAGGGCGTGAGTTTCAGAGGGG
CCGTCATCAAGCATGCCTTCCGTAACTCCTTTATACCCATTGCCTCCACTCTGGGCAGCCTCATTAGCCTGATTGTGGCC
GGCTCCATGCTGGTGGAAAAAGTTTTCGATATCCAGGGGTTCGGGATGCTGAGTTACCAGGCTCTGATGGACAAGGATTA
CGCCCTGATCATGGGAACGCTGCTGCTTACCTCCTTCCTGATGGTACTGGGCAACCTTCTCTCCGATATCATCGTGGCCG
CTGTGGATCCGCGCATCAAATTTGAATAA

Upstream 100 bases:

>100_bases
CTTAAGAAGAACCGGGCAGCACCTTATGTTAGCAAAGGCTTACAAATTTGCATTGCTACTTGCCTCACCTTCCACAAATC
GGTAGAGTTCAGCGCGACGA

Downstream 100 bases:

>100_bases
TACACATGGTTAGAAAACTGGCATACCTTTTGGTCATTCTGGCGGTTCTTACTGCCGTGGGAGAGCTGTGCGGGCTGCTC
CTGCCCACGTTAAGCTGGCC

Product: binding-protein-dependent transporters inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MKTYIIRRLLLMPLTLLGVTFLVFCITRFVPGGPIEQMMQQQSMSALSGQKAGSQRGDNNLSEADMERLEEQYSLQEPII
TAYLQWLGVLPKKIFISREEFGEIGGAGEGDKEDEYSGISDTHTRINLNETGEQVVVVRQDKDSGSVKDAFFSGTPSRKA
ASEGWTVDIESPMDRAERWARRMRQTDNTEAVRDKARGYAWRAVMYKTSFDGLLQGTMGNSFKYNEPVWDMIKERIPVSL
YFGILSAIITYSVCIPLGVVKAIRHKSLVDNISSVLIFLGYSVPGFALGAVLVVYLGARLEWFPLCGLTSPDFADMGFWQ
QAGDLLHHTVLPLICYVVSSFAITTMMMKNNLMDNLSADYIRTAMAKGVSFRGAVIKHAFRNSFIPIASTLGSLISLIVA
GSMLVEKVFDIQGFGMLSYQALMDKDYALIMGTLLLTSFLMVLGNLLSDIIVAAVDPRIKFE

Sequences:

>Translated_462_residues
MKTYIIRRLLLMPLTLLGVTFLVFCITRFVPGGPIEQMMQQQSMSALSGQKAGSQRGDNNLSEADMERLEEQYSLQEPII
TAYLQWLGVLPKKIFISREEFGEIGGAGEGDKEDEYSGISDTHTRINLNETGEQVVVVRQDKDSGSVKDAFFSGTPSRKA
ASEGWTVDIESPMDRAERWARRMRQTDNTEAVRDKARGYAWRAVMYKTSFDGLLQGTMGNSFKYNEPVWDMIKERIPVSL
YFGILSAIITYSVCIPLGVVKAIRHKSLVDNISSVLIFLGYSVPGFALGAVLVVYLGARLEWFPLCGLTSPDFADMGFWQ
QAGDLLHHTVLPLICYVVSSFAITTMMMKNNLMDNLSADYIRTAMAKGVSFRGAVIKHAFRNSFIPIASTLGSLISLIVA
GSMLVEKVFDIQGFGMLSYQALMDKDYALIMGTLLLTSFLMVLGNLLSDIIVAAVDPRIKFE
>Mature_462_residues
MKTYIIRRLLLMPLTLLGVTFLVFCITRFVPGGPIEQMMQQQSMSALSGQKAGSQRGDNNLSEADMERLEEQYSLQEPII
TAYLQWLGVLPKKIFISREEFGEIGGAGEGDKEDEYSGISDTHTRINLNETGEQVVVVRQDKDSGSVKDAFFSGTPSRKA
ASEGWTVDIESPMDRAERWARRMRQTDNTEAVRDKARGYAWRAVMYKTSFDGLLQGTMGNSFKYNEPVWDMIKERIPVSL
YFGILSAIITYSVCIPLGVVKAIRHKSLVDNISSVLIFLGYSVPGFALGAVLVVYLGARLEWFPLCGLTSPDFADMGFWQ
QAGDLLHHTVLPLICYVVSSFAITTMMMKNNLMDNLSADYIRTAMAKGVSFRGAVIKHAFRNSFIPIASTLGSLISLIVA
GSMLVEKVFDIQGFGMLSYQALMDKDYALIMGTLLLTSFLMVLGNLLSDIIVAAVDPRIKFE

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=248, Percent_Identity=38.7096774193548, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI1789965, Length=267, Percent_Identity=30.7116104868914, Blast_Score=144, Evalue=9e-36,
Organism=Escherichia coli, GI1787053, Length=249, Percent_Identity=32.1285140562249, Blast_Score=129, Evalue=5e-31,
Organism=Escherichia coli, GI1787497, Length=257, Percent_Identity=26.4591439688716, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI1789888, Length=257, Percent_Identity=27.2373540856031, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1787550, Length=273, Percent_Identity=25.2747252747253, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1787761, Length=261, Percent_Identity=27.2030651340996, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 51337; Mature: 51337

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTYIIRRLLLMPLTLLGVTFLVFCITRFVPGGPIEQMMQQQSMSALSGQKAGSQRGDNN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
LSEADMERLEEQYSLQEPIITAYLQWLGVLPKKIFISREEFGEIGGAGEGDKEDEYSGIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHCCCCCCCCCCCCCCCCCC
DTHTRINLNETGEQVVVVRQDKDSGSVKDAFFSGTPSRKAASEGWTVDIESPMDRAERWA
CCCCEEEECCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHH
RRMRQTDNTEAVRDKARGYAWRAVMYKTSFDGLLQGTMGNSFKYNEPVWDMIKERIPVSL
HHHHCCCCHHHHHHHHCCCEEHHHEECCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHH
YFGILSAIITYSVCIPLGVVKAIRHKSLVDNISSVLIFLGYSVPGFALGAVLVVYLGARL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
EWFPLCGLTSPDFADMGFWQQAGDLLHHTVLPLICYVVSSFAITTMMMKNNLMDNLSADY
CEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRTAMAKGVSFRGAVIKHAFRNSFIPIASTLGSLISLIVAGSMLVEKVFDIQGFGMLSYQ
HHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ALMDKDYALIMGTLLLTSFLMVLGNLLSDIIVAAVDPRIKFE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKTYIIRRLLLMPLTLLGVTFLVFCITRFVPGGPIEQMMQQQSMSALSGQKAGSQRGDNN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
LSEADMERLEEQYSLQEPIITAYLQWLGVLPKKIFISREEFGEIGGAGEGDKEDEYSGIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHCCCCCCCCCCCCCCCCCC
DTHTRINLNETGEQVVVVRQDKDSGSVKDAFFSGTPSRKAASEGWTVDIESPMDRAERWA
CCCCEEEECCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHH
RRMRQTDNTEAVRDKARGYAWRAVMYKTSFDGLLQGTMGNSFKYNEPVWDMIKERIPVSL
HHHHCCCCHHHHHHHHCCCEEHHHEECCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHH
YFGILSAIITYSVCIPLGVVKAIRHKSLVDNISSVLIFLGYSVPGFALGAVLVVYLGARL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
EWFPLCGLTSPDFADMGFWQQAGDLLHHTVLPLICYVVSSFAITTMMMKNNLMDNLSADY
CEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRTAMAKGVSFRGAVIKHAFRNSFIPIASTLGSLISLIVAGSMLVEKVFDIQGFGMLSYQ
HHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ALMDKDYALIMGTLLLTSFLMVLGNLLSDIIVAAVDPRIKFE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]