Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187736321

Identifier: 187736321

GI number: 187736321

Start: 2229260

End: 2229772

Strand: Direct

Name: 187736321

Synonym: Amuc_1834

Alternate gene names: NA

Gene position: 2229260-2229772 (Clockwise)

Preceding gene: 187736315

Following gene: 187736322

Centisome position: 83.68

GC content: 53.02

Gene sequence:

>513_bases
ATGAAGAAGAGTATTCTAGCCGTCTGTCTGGGCCTGGCCGGATTCTGGAGCGTTCTGGCTGAAGATTCTCCCATTGCGGC
CCCGGGAAGGGTAAATGAACAGGGGGATGCGGAACTGCCTTCCGGGGAATTGTTGTCGGATCATGTGGCGGAAGCGGAAT
TTACGGGAATAATTCATCGGAAATGCAGGTTCCTTACTTCCCTGTGCCCGGACAAGTGCGACCATGCCAGGGATTTCGCC
GTTTTCCGGATCGTCAAGTACCTGGATTACCGGAAACCAGGCAAGTACGGCGATGAAAAGCAGGATCAGCTGATGGTTGA
CGTTAATCCGGCGCACAAGCCCATCCTGCAGAGTGCGGATATTTTGAAGAAGATATCCGCCCTTAAACCGGGGGACAAGG
TGGTTCTTCACTGGGCTCATTATTATATGCACCGGAATTCCAGTTCTTTCCCGGAACGTCCCGTGATTTCCGTGGAGCCG
GCGGCTCTTTCCGGAGGAAAAAAGGGAATGTAA

Upstream 100 bases:

>100_bases
AAAATAAAATGATGTTTTTCCATGGAGATATTCCGTCAGTGTCCGCAGAAGCTCTTTCTTCTTCTTGACTTGTGTTTCCG
CGGCGGATAGGAATGAAGAG

Downstream 100 bases:

>100_bases
GGACTGGTCTTTCCTCAGGCCGTTCAAGCGGGGCTGGACGCAACGGAAAGCCGTGTGTTAGGAAACGGACCGGCAAATAA
CGCTGCTCCGGGCAAGATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKKSILAVCLGLAGFWSVLAEDSPIAAPGRVNEQGDAELPSGELLSDHVAEAEFTGIIHRKCRFLTSLCPDKCDHARDFA
VFRIVKYLDYRKPGKYGDEKQDQLMVDVNPAHKPILQSADILKKISALKPGDKVVLHWAHYYMHRNSSSFPERPVISVEP
AALSGGKKGM

Sequences:

>Translated_170_residues
MKKSILAVCLGLAGFWSVLAEDSPIAAPGRVNEQGDAELPSGELLSDHVAEAEFTGIIHRKCRFLTSLCPDKCDHARDFA
VFRIVKYLDYRKPGKYGDEKQDQLMVDVNPAHKPILQSADILKKISALKPGDKVVLHWAHYYMHRNSSSFPERPVISVEP
AALSGGKKGM
>Mature_170_residues
MKKSILAVCLGLAGFWSVLAEDSPIAAPGRVNEQGDAELPSGELLSDHVAEAEFTGIIHRKCRFLTSLCPDKCDHARDFA
VFRIVKYLDYRKPGKYGDEKQDQLMVDVNPAHKPILQSADILKKISALKPGDKVVLHWAHYYMHRNSSSFPERPVISVEP
AALSGGKKGM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18800; Mature: 18800

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSILAVCLGLAGFWSVLAEDSPIAAPGRVNEQGDAELPSGELLSDHVAEAEFTGIIHR
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
KCRFLTSLCPDKCDHARDFAVFRIVKYLDYRKPGKYGDEKQDQLMVDVNPAHKPILQSAD
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHH
ILKKISALKPGDKVVLHWAHYYMHRNSSSFPERPVISVEPAALSGGKKGM
HHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCCCCCEEECCHHCCCCCCCC
>Mature Secondary Structure
MKKSILAVCLGLAGFWSVLAEDSPIAAPGRVNEQGDAELPSGELLSDHVAEAEFTGIIHR
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
KCRFLTSLCPDKCDHARDFAVFRIVKYLDYRKPGKYGDEKQDQLMVDVNPAHKPILQSAD
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHH
ILKKISALKPGDKVVLHWAHYYMHRNSSSFPERPVISVEPAALSGGKKGM
HHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCCCCCEEECCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA