Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736321
Identifier: 187736321
GI number: 187736321
Start: 2229260
End: 2229772
Strand: Direct
Name: 187736321
Synonym: Amuc_1834
Alternate gene names: NA
Gene position: 2229260-2229772 (Clockwise)
Preceding gene: 187736315
Following gene: 187736322
Centisome position: 83.68
GC content: 53.02
Gene sequence:
>513_bases ATGAAGAAGAGTATTCTAGCCGTCTGTCTGGGCCTGGCCGGATTCTGGAGCGTTCTGGCTGAAGATTCTCCCATTGCGGC CCCGGGAAGGGTAAATGAACAGGGGGATGCGGAACTGCCTTCCGGGGAATTGTTGTCGGATCATGTGGCGGAAGCGGAAT TTACGGGAATAATTCATCGGAAATGCAGGTTCCTTACTTCCCTGTGCCCGGACAAGTGCGACCATGCCAGGGATTTCGCC GTTTTCCGGATCGTCAAGTACCTGGATTACCGGAAACCAGGCAAGTACGGCGATGAAAAGCAGGATCAGCTGATGGTTGA CGTTAATCCGGCGCACAAGCCCATCCTGCAGAGTGCGGATATTTTGAAGAAGATATCCGCCCTTAAACCGGGGGACAAGG TGGTTCTTCACTGGGCTCATTATTATATGCACCGGAATTCCAGTTCTTTCCCGGAACGTCCCGTGATTTCCGTGGAGCCG GCGGCTCTTTCCGGAGGAAAAAAGGGAATGTAA
Upstream 100 bases:
>100_bases AAAATAAAATGATGTTTTTCCATGGAGATATTCCGTCAGTGTCCGCAGAAGCTCTTTCTTCTTCTTGACTTGTGTTTCCG CGGCGGATAGGAATGAAGAG
Downstream 100 bases:
>100_bases GGACTGGTCTTTCCTCAGGCCGTTCAAGCGGGGCTGGACGCAACGGAAAGCCGTGTGTTAGGAAACGGACCGGCAAATAA CGCTGCTCCGGGCAAGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MKKSILAVCLGLAGFWSVLAEDSPIAAPGRVNEQGDAELPSGELLSDHVAEAEFTGIIHRKCRFLTSLCPDKCDHARDFA VFRIVKYLDYRKPGKYGDEKQDQLMVDVNPAHKPILQSADILKKISALKPGDKVVLHWAHYYMHRNSSSFPERPVISVEP AALSGGKKGM
Sequences:
>Translated_170_residues MKKSILAVCLGLAGFWSVLAEDSPIAAPGRVNEQGDAELPSGELLSDHVAEAEFTGIIHRKCRFLTSLCPDKCDHARDFA VFRIVKYLDYRKPGKYGDEKQDQLMVDVNPAHKPILQSADILKKISALKPGDKVVLHWAHYYMHRNSSSFPERPVISVEP AALSGGKKGM >Mature_170_residues MKKSILAVCLGLAGFWSVLAEDSPIAAPGRVNEQGDAELPSGELLSDHVAEAEFTGIIHRKCRFLTSLCPDKCDHARDFA VFRIVKYLDYRKPGKYGDEKQDQLMVDVNPAHKPILQSADILKKISALKPGDKVVLHWAHYYMHRNSSSFPERPVISVEP AALSGGKKGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18800; Mature: 18800
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSILAVCLGLAGFWSVLAEDSPIAAPGRVNEQGDAELPSGELLSDHVAEAEFTGIIHR CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KCRFLTSLCPDKCDHARDFAVFRIVKYLDYRKPGKYGDEKQDQLMVDVNPAHKPILQSAD HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHH ILKKISALKPGDKVVLHWAHYYMHRNSSSFPERPVISVEPAALSGGKKGM HHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCCCCCEEECCHHCCCCCCCC >Mature Secondary Structure MKKSILAVCLGLAGFWSVLAEDSPIAAPGRVNEQGDAELPSGELLSDHVAEAEFTGIIHR CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KCRFLTSLCPDKCDHARDFAVFRIVKYLDYRKPGKYGDEKQDQLMVDVNPAHKPILQSAD HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHH ILKKISALKPGDKVVLHWAHYYMHRNSSSFPERPVISVEPAALSGGKKGM HHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCCCCCEEECCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA