Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is fucP [H]
Identifier: 187736320
GI number: 187736320
Start: 2227137
End: 2229071
Strand: Reverse
Name: fucP [H]
Synonym: Amuc_1833
Alternate gene names: 187736320
Gene position: 2229071-2227137 (Counterclockwise)
Preceding gene: 187736323
Following gene: 187736319
Centisome position: 83.67
GC content: 54.88
Gene sequence:
>1935_bases ATGGATAACAACCGTACCTCTACCGTGCCGATCGTTCCCAAACAGTACCGGCTGCCGTTCTTCATGCTGGTCTCCTGTTT TGCGCTGTGGGGCCTCCTGAACAACATGACGGACAACCTGGTTCCGGCATTTAGCAAAATATTCATGATCAATGCTTCGG AATCCGCCGGAGTTCAGATTTCCTTCTATGGGGCCTATGCGGTGCTTGCCATTTTCGCCTCCATCCTTCTGGAGGAATTT TCCTATAAGGCGGGTGTCCTCATCGGGCTGGGGCTCTACATGATCGGCGCGCTGTGCTACATTCCCGCCGCCATCGGGCA AAGTTTCGATATCTATCTGATGGCTATCTTCGTGCTGGCCGGAGGCCTCTCCATTTTGGAGACCACCTGCAACCCCTTCG TTCTCTCCATGGGGTCCCAGGAAACGAGCGTCCGCCGTCTGAACTTCGCCCAGGCCTTCAATCCCATAGGCTCCCTGACA GGTATTTTCCTGGCCAAATATTTCATTCTGGCGCATTTGAACGATGCGGACATGGACACCCGCAAAGCCATGGACCCGGA ACAACTGAACGCCATTGTCAGCGATGAACTTTTCTGGGTATGCGTTCCTTATGTGGGCCTGGTAGCCATCGCCGCCGTCA TCTGGTTCTTTTTCTGCCGTTACAAATCCGACGATGAAAACGTACCCACCCGGGAAAACACACAGCCCCTTTCCTCTAAA CTCGGCCGCCTGGGACTCTGCATCGCCCTGATTCTCATCCCCTTCCTGTTCCAGTACTATTCCGCTTTCGAATTCAGCAT GGTGCAGCAAATCCTGATTATGATGATCGGGCCCATCGCCTTCCTGCTCATCATGCCGGACTACCGCTGCCAGCTTATGA AACTGGTGAAGCTTCCGCGCTACTTCTGCGGCGTGGCAGCCCAATTTTTCTATGTAGGCGTGCAGATTGCCGTGTGGACG TGGACGATTAAATACATCATGTCCGTCTTCCCCGGAATGCAGGAAGCGGCGGCCTCCAACTACTATATCTTTTCCATCAT CCTGTTCATCGCCTGCCGCGCCATCACTACGGCCCTGATGAAAAAATTTAACCCGGCCAACATGATGTCCCTTTTCGCCG TCGCCGGCATTCTCTGCTGCCTGGGCACCATCTATCTGCCCAGGGAAATCTCCGTCTGGACACTGGTCGGAATCTCCGGC TGCATGTCCCTGATGTTCCCCACTATTTACGGCATCGCCCTGCGCGGACTGGGGTCTGAAGTGAAACTGGGAGCTGCGGG CCTTATCATGGCCATTCTGGGCGGCGCAGTCATTACCCCGTACATGGGTTCCTGGATAGACAACACCACAGTAAAAAACC AGGTGGCCTATTTTGAATCCATCAACCGTCCTCTGATCGCGCAGGCGGAAGCTGCGGACGCCCGCAAATCCTTATCCGGA GCCATGCTGGCGCTGTACAGGATGTCAGAAGCCAGCCCTGCGGACGGAGAAGAACAAGCCAGGGCCGCCGGCAAATTCCA GAAAAACCTGGAAACCTTCCTTTCCCTCCCCTCCCTGGAAGGGGACGCTTTTGAGCAGGCGGCCAAATCCCTGCCCGGCT GCTCCTCCCTCAAGCCTGGGGAACTGGCCGTTTTCAAAGCCAATCTGGAACGCCTCCCCGCTCCTGCCGGAAGAGAACAG CAAATTCAGCAATTCTCCCTGATTCCGGCGCTCTCCACGTTATCCGGAAACCAGGCGGAAGTGCTGGACAACCTCATCGC CCTGCCCCTGGACATGAAGCAATTCCAAACGGCCCAGGAAAACTTCGTGGAAAAAGCGGTGCGGTCATCCTTCTTTATTC CCATCATCTGCTTTGCCGTGGTACTAATTTACGGCTTCTTCTTCCGCAACACTCATCTGAAAAAGGAAGAGGAAGAAAAG CCTGCCCAGGCATGA
Upstream 100 bases:
>100_bases TCATTTTATTTTTTTTATCAACAGGTTGGATAATTTCTGGACTCTTTTCGGTTTCCAGATTGACGCACCGCCGTCCTTGT GAGAAATTGACAAAAGCAAT
Downstream 100 bases:
>100_bases ACCAGCTTCACATCACCTACGCAAGATATGAAAACAGCATTACCAACCATCGGTATCCGCCCCACGATTGACGGTCGCCG CCTCGGCGTCCGGGAATCCC
Product: L-fucose transporter
Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 644; Mature: 644
Protein sequence:
>644_residues MDNNRTSTVPIVPKQYRLPFFMLVSCFALWGLLNNMTDNLVPAFSKIFMINASESAGVQISFYGAYAVLAIFASILLEEF SYKAGVLIGLGLYMIGALCYIPAAIGQSFDIYLMAIFVLAGGLSILETTCNPFVLSMGSQETSVRRLNFAQAFNPIGSLT GIFLAKYFILAHLNDADMDTRKAMDPEQLNAIVSDELFWVCVPYVGLVAIAAVIWFFFCRYKSDDENVPTRENTQPLSSK LGRLGLCIALILIPFLFQYYSAFEFSMVQQILIMMIGPIAFLLIMPDYRCQLMKLVKLPRYFCGVAAQFFYVGVQIAVWT WTIKYIMSVFPGMQEAAASNYYIFSIILFIACRAITTALMKKFNPANMMSLFAVAGILCCLGTIYLPREISVWTLVGISG CMSLMFPTIYGIALRGLGSEVKLGAAGLIMAILGGAVITPYMGSWIDNTTVKNQVAYFESINRPLIAQAEAADARKSLSG AMLALYRMSEASPADGEEQARAAGKFQKNLETFLSLPSLEGDAFEQAAKSLPGCSSLKPGELAVFKANLERLPAPAGREQ QIQQFSLIPALSTLSGNQAEVLDNLIALPLDMKQFQTAQENFVEKAVRSSFFIPIICFAVVLIYGFFFRNTHLKKEEEEK PAQA
Sequences:
>Translated_644_residues MDNNRTSTVPIVPKQYRLPFFMLVSCFALWGLLNNMTDNLVPAFSKIFMINASESAGVQISFYGAYAVLAIFASILLEEF SYKAGVLIGLGLYMIGALCYIPAAIGQSFDIYLMAIFVLAGGLSILETTCNPFVLSMGSQETSVRRLNFAQAFNPIGSLT GIFLAKYFILAHLNDADMDTRKAMDPEQLNAIVSDELFWVCVPYVGLVAIAAVIWFFFCRYKSDDENVPTRENTQPLSSK LGRLGLCIALILIPFLFQYYSAFEFSMVQQILIMMIGPIAFLLIMPDYRCQLMKLVKLPRYFCGVAAQFFYVGVQIAVWT WTIKYIMSVFPGMQEAAASNYYIFSIILFIACRAITTALMKKFNPANMMSLFAVAGILCCLGTIYLPREISVWTLVGISG CMSLMFPTIYGIALRGLGSEVKLGAAGLIMAILGGAVITPYMGSWIDNTTVKNQVAYFESINRPLIAQAEAADARKSLSG AMLALYRMSEASPADGEEQARAAGKFQKNLETFLSLPSLEGDAFEQAAKSLPGCSSLKPGELAVFKANLERLPAPAGREQ QIQQFSLIPALSTLSGNQAEVLDNLIALPLDMKQFQTAQENFVEKAVRSSFFIPIICFAVVLIYGFFFRNTHLKKEEEEK PAQA >Mature_644_residues MDNNRTSTVPIVPKQYRLPFFMLVSCFALWGLLNNMTDNLVPAFSKIFMINASESAGVQISFYGAYAVLAIFASILLEEF SYKAGVLIGLGLYMIGALCYIPAAIGQSFDIYLMAIFVLAGGLSILETTCNPFVLSMGSQETSVRRLNFAQAFNPIGSLT GIFLAKYFILAHLNDADMDTRKAMDPEQLNAIVSDELFWVCVPYVGLVAIAAVIWFFFCRYKSDDENVPTRENTQPLSSK LGRLGLCIALILIPFLFQYYSAFEFSMVQQILIMMIGPIAFLLIMPDYRCQLMKLVKLPRYFCGVAAQFFYVGVQIAVWT WTIKYIMSVFPGMQEAAASNYYIFSIILFIACRAITTALMKKFNPANMMSLFAVAGILCCLGTIYLPREISVWTLVGISG CMSLMFPTIYGIALRGLGSEVKLGAAGLIMAILGGAVITPYMGSWIDNTTVKNQVAYFESINRPLIAQAEAADARKSLSG AMLALYRMSEASPADGEEQARAAGKFQKNLETFLSLPSLEGDAFEQAAKSLPGCSSLKPGELAVFKANLERLPAPAGREQ QIQQFSLIPALSTLSGNQAEVLDNLIALPLDMKQFQTAQENFVEKAVRSSFFIPIICFAVVLIYGFFFRNTHLKKEEEEK PAQA
Specific function: Transport of L-fucose into the cell [H]
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]
Homologues:
Organism=Escherichia coli, GI1789166, Length=435, Percent_Identity=28.5057471264368, Blast_Score=203, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005275 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 71046; Mature: 71046
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNNRTSTVPIVPKQYRLPFFMLVSCFALWGLLNNMTDNLVPAFSKIFMINASESAGVQI CCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEE SFYGAYAVLAIFASILLEEFSYKAGVLIGLGLYMIGALCYIPAAIGQSFDIYLMAIFVLA EEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GGLSILETTCNPFVLSMGSQETSVRRLNFAQAFNPIGSLTGIFLAKYFILAHLNDADMDT CCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCH RKAMDPEQLNAIVSDELFWVCVPYVGLVAIAAVIWFFFCRYKSDDENVPTRENTQPLSSK HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH LGRLGLCIALILIPFLFQYYSAFEFSMVQQILIMMIGPIAFLLIMPDYRCQLMKLVKLPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH YFCGVAAQFFYVGVQIAVWTWTIKYIMSVFPGMQEAAASNYYIFSIILFIACRAITTALM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH KKFNPANMMSLFAVAGILCCLGTIYLPREISVWTLVGISGCMSLMFPTIYGIALRGLGSE HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VKLGAAGLIMAILGGAVITPYMGSWIDNTTVKNQVAYFESINRPLIAQAEAADARKSLSG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEECCHHHHHHHHHHH AMLALYRMSEASPADGEEQARAAGKFQKNLETFLSLPSLEGDAFEQAAKSLPGCSSLKPG HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC ELAVFKANLERLPAPAGREQQIQQFSLIPALSTLSGNQAEVLDNLIALPLDMKQFQTAQE CEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHH NFVEKAVRSSFFIPIICFAVVLIYGFFFRNTHLKKEEEEKPAQA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC >Mature Secondary Structure MDNNRTSTVPIVPKQYRLPFFMLVSCFALWGLLNNMTDNLVPAFSKIFMINASESAGVQI CCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEE SFYGAYAVLAIFASILLEEFSYKAGVLIGLGLYMIGALCYIPAAIGQSFDIYLMAIFVLA EEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GGLSILETTCNPFVLSMGSQETSVRRLNFAQAFNPIGSLTGIFLAKYFILAHLNDADMDT CCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCH RKAMDPEQLNAIVSDELFWVCVPYVGLVAIAAVIWFFFCRYKSDDENVPTRENTQPLSSK HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH LGRLGLCIALILIPFLFQYYSAFEFSMVQQILIMMIGPIAFLLIMPDYRCQLMKLVKLPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH YFCGVAAQFFYVGVQIAVWTWTIKYIMSVFPGMQEAAASNYYIFSIILFIACRAITTALM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH KKFNPANMMSLFAVAGILCCLGTIYLPREISVWTLVGISGCMSLMFPTIYGIALRGLGSE HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VKLGAAGLIMAILGGAVITPYMGSWIDNTTVKNQVAYFESINRPLIAQAEAADARKSLSG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEECCHHHHHHHHHHH AMLALYRMSEASPADGEEQARAAGKFQKNLETFLSLPSLEGDAFEQAAKSLPGCSSLKPG HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC ELAVFKANLERLPAPAGREQQIQQFSLIPALSTLSGNQAEVLDNLIALPLDMKQFQTAQE CEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHH NFVEKAVRSSFFIPIICFAVVLIYGFFFRNTHLKKEEEEKPAQA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]
General reaction: Permease [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]