Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is fucI [H]
Identifier: 187736319
GI number: 187736319
Start: 2225331
End: 2227109
Strand: Reverse
Name: fucI [H]
Synonym: Amuc_1832
Alternate gene names: 187736319
Gene position: 2227109-2225331 (Counterclockwise)
Preceding gene: 187736320
Following gene: 187736318
Centisome position: 83.6
GC content: 61.1
Gene sequence:
>1779_bases ATGAAAACAGCATTACCAACCATCGGTATCCGCCCCACGATTGACGGTCGCCGCCTCGGCGTCCGGGAATCCCTGGAAGA TCAAACCATGAACATGGCCAAGGCGGCCGCCGCCCTTATTGAGGCCAACATCCGCCACGCCTCCGGAGAACCCGTCAAGT GCGTGATCGCGGACACCTGCATCGGCGGCCCGGCGGAAGCCGCCGCCTGCGCGGACAAATTCAAGGCCAACAACGTCGGC GTCTCCCTGGCCGTTACGCCCTGCTGGTGCTACGGCAGTGAAACATTTGACATGGATCCGTTCACTCCCAAGGCCATCTG GGGCTTCAACGGCACGGAACGCCCCGGCGCCGTGTATCTGGCCGCTGCGCTGGCCGGCCTGAACCAGAAAGGATTCCCGG CTTTCTCCATCTACGGAAAAGACGTGCAGGACGCCACGGATACTTCCATCCCGGAAGACGTAGCTGAAAAAATCCTGCGC TTCTGCCGCGCCGGTCTCGCCGTAGCCACCCTCCGCGGAAAAGGCTATCTTTCCATCGGCGGCTGCTCCATGGGCATTGC CGGTTCCATTGTGGACCAGTCTTTCTGGGAAAATTACCTGGGCATCCGCGTACAGGCCGTGGACATGACGGAAGTGCGCC GCCGCATGGACCAGAAAATTTATGACGAAGCGGAATTCGACCTCGCCATGCAATGGGCGGATTCCGTCTTTAAATTCGCC GAGGACAAAAACCGTCCGGACCTGAAGCTGGATGAAGCCGGACGCCGCAAAACCTTCAGGGAAAGCGTGCTGATGGCCAT GATCTTCCGCGACATGATGCAGGGCAATCCCAAGCTCAAGAAAATCGACCGCGAAGAAGAATCCCTGGGTTACCAGGCCA TTGCCGGCGGCTTCCAGGGCCAGCGCCACTGGACGGACTTCTACCCGAACGGAGACATCGCGGAAACCCTGCTTAACTCC ACCTTTGACTGGAACGGCCCGCGCGCCCCGCTTCCCTTCGCTACGGAAAATGACTCTCTCAACGGCGCCTGCCTCCTCTT CGGCTATCTGCTGACCGGACAGGCCAATGTCTTCGCGGACGTTCGCACCTACTGGAGTCCGGAAGCCGTAAAGCGCGTCA CGGGTTATACGCTGGAAGGCCATGCCAAGGACGGCATCATCCACCTCATCAATTCCGGCTCCGCCGCCCTGGACGGCTGC ATGGCCTGCACGGGCAAGGACGGACAGCCCGTCATGAAAAAACACTGGGACGTCACCCCGGACGATGCGAAAACCATGAT GGAACAAGCCGTCTGGTGCCCGGCCAACCGGGAATACTTCCGCGGCGGCGGCTACTCCGTCCACTACGTCACCAGGGGCG GCGCTCCCGTCACCATGATGCGCCTGAACATCGTCAAGGGACTCGGCCCCGTCCTCATCGTGGCGGAAGGCTGGTCTGTT GATCTGCCTGCCGAGGTGCACAAGACCCTGGACGAACGCACTGACCCGGGCTGGCCGACCACCTGGTTCGCCCCGCGCCT GACCGGCAAGGGAGCCTTTACGGACGTGTACAGCGTCATGGCCAACATGGGAGCCAACCACGGAGCCTTTACTTACGGCC ACATCGGCGCAGACATCCTGACGCTGGCCTCCATGCTGCGCATTCCCGTATACGCCCATAACATTCCGGATGACCAAATC TACCGCCCCTCTGCCTGGGGTCTCCACGGCACGGCGGATCCGGAAGGAGCTGATTTCCGGGCCTGCGCCAACTACGGGCC ATTATACGGAAAATACTGA
Upstream 100 bases:
>100_bases ACTAATTTACGGCTTCTTCTTCCGCAACACTCATCTGAAAAAGGAAGAGGAAGAAAAGCCTGCCCAGGCATGAACCAGCT TCACATCACCTACGCAAGAT
Downstream 100 bases:
>100_bases AAAAGAAAGGTAACAGTTAATAGGTAATAGTTAACAGCTTCGGATAAAACATGGCAGAAAGTCCCGTTTCCGCTAAAAGC TTTTCTTTCGCGGTCCGCAT
Product: L-fucose isomerase
Products: NA
Alternate protein names: 6-deoxy-L-galactose isomerase; FucIase [H]
Number of amino acids: Translated: 592; Mature: 592
Protein sequence:
>592_residues MKTALPTIGIRPTIDGRRLGVRESLEDQTMNMAKAAAALIEANIRHASGEPVKCVIADTCIGGPAEAAACADKFKANNVG VSLAVTPCWCYGSETFDMDPFTPKAIWGFNGTERPGAVYLAAALAGLNQKGFPAFSIYGKDVQDATDTSIPEDVAEKILR FCRAGLAVATLRGKGYLSIGGCSMGIAGSIVDQSFWENYLGIRVQAVDMTEVRRRMDQKIYDEAEFDLAMQWADSVFKFA EDKNRPDLKLDEAGRRKTFRESVLMAMIFRDMMQGNPKLKKIDREEESLGYQAIAGGFQGQRHWTDFYPNGDIAETLLNS TFDWNGPRAPLPFATENDSLNGACLLFGYLLTGQANVFADVRTYWSPEAVKRVTGYTLEGHAKDGIIHLINSGSAALDGC MACTGKDGQPVMKKHWDVTPDDAKTMMEQAVWCPANREYFRGGGYSVHYVTRGGAPVTMMRLNIVKGLGPVLIVAEGWSV DLPAEVHKTLDERTDPGWPTTWFAPRLTGKGAFTDVYSVMANMGANHGAFTYGHIGADILTLASMLRIPVYAHNIPDDQI YRPSAWGLHGTADPEGADFRACANYGPLYGKY
Sequences:
>Translated_592_residues MKTALPTIGIRPTIDGRRLGVRESLEDQTMNMAKAAAALIEANIRHASGEPVKCVIADTCIGGPAEAAACADKFKANNVG VSLAVTPCWCYGSETFDMDPFTPKAIWGFNGTERPGAVYLAAALAGLNQKGFPAFSIYGKDVQDATDTSIPEDVAEKILR FCRAGLAVATLRGKGYLSIGGCSMGIAGSIVDQSFWENYLGIRVQAVDMTEVRRRMDQKIYDEAEFDLAMQWADSVFKFA EDKNRPDLKLDEAGRRKTFRESVLMAMIFRDMMQGNPKLKKIDREEESLGYQAIAGGFQGQRHWTDFYPNGDIAETLLNS TFDWNGPRAPLPFATENDSLNGACLLFGYLLTGQANVFADVRTYWSPEAVKRVTGYTLEGHAKDGIIHLINSGSAALDGC MACTGKDGQPVMKKHWDVTPDDAKTMMEQAVWCPANREYFRGGGYSVHYVTRGGAPVTMMRLNIVKGLGPVLIVAEGWSV DLPAEVHKTLDERTDPGWPTTWFAPRLTGKGAFTDVYSVMANMGANHGAFTYGHIGADILTLASMLRIPVYAHNIPDDQI YRPSAWGLHGTADPEGADFRACANYGPLYGKY >Mature_592_residues MKTALPTIGIRPTIDGRRLGVRESLEDQTMNMAKAAAALIEANIRHASGEPVKCVIADTCIGGPAEAAACADKFKANNVG VSLAVTPCWCYGSETFDMDPFTPKAIWGFNGTERPGAVYLAAALAGLNQKGFPAFSIYGKDVQDATDTSIPEDVAEKILR FCRAGLAVATLRGKGYLSIGGCSMGIAGSIVDQSFWENYLGIRVQAVDMTEVRRRMDQKIYDEAEFDLAMQWADSVFKFA EDKNRPDLKLDEAGRRKTFRESVLMAMIFRDMMQGNPKLKKIDREEESLGYQAIAGGFQGQRHWTDFYPNGDIAETLLNS TFDWNGPRAPLPFATENDSLNGACLLFGYLLTGQANVFADVRTYWSPEAVKRVTGYTLEGHAKDGIIHLINSGSAALDGC MACTGKDGQPVMKKHWDVTPDDAKTMMEQAVWCPANREYFRGGGYSVHYVTRGGAPVTMMRLNIVKGLGPVLIVAEGWSV DLPAEVHKTLDERTDPGWPTTWFAPRLTGKGAFTDVYSVMANMGANHGAFTYGHIGADILTLASMLRIPVYAHNIPDDQI YRPSAWGLHGTADPEGADFRACANYGPLYGKY
Specific function: Converts the aldose L-fucose into the corresponding ketose L-fuculose [H]
COG id: COG2407
COG function: function code G; L-fucose isomerase and related proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L-fucose isomerase family [H]
Homologues:
Organism=Escherichia coli, GI1789167, Length=590, Percent_Identity=67.4576271186441, Blast_Score=838, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015888 - InterPro: IPR004216 - InterPro: IPR012888 - InterPro: IPR005763 - InterPro: IPR009015 - InterPro: IPR012889 [H]
Pfam domain/function: PF02952 Fucose_iso_C; PF07881 Fucose_iso_N1; PF07882 Fucose_iso_N2 [H]
EC number: =5.3.1.25 [H]
Molecular weight: Translated: 64696; Mature: 64696
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTALPTIGIRPTIDGRRLGVRESLEDQTMNMAKAAAALIEANIRHASGEPVKCVIADTC CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC IGGPAEAAACADKFKANNVGVSLAVTPCWCYGSETFDMDPFTPKAIWGFNGTERPGAVYL CCCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCEEH AAALAGLNQKGFPAFSIYGKDVQDATDTSIPEDVAEKILRFCRAGLAVATLRGKGYLSIG HHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEC GCSMGIAGSIVDQSFWENYLGIRVQAVDMTEVRRRMDQKIYDEAEFDLAMQWADSVFKFA CCCCCCHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDKNRPDLKLDEAGRRKTFRESVLMAMIFRDMMQGNPKLKKIDREEESLGYQAIAGGFQG HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHCCHHHHHCCCCC QRHWTDFYPNGDIAETLLNSTFDWNGPRAPLPFATENDSLNGACLLFGYLLTGQANVFAD CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEH VRTYWSPEAVKRVTGYTLEGHAKDGIIHLINSGSAALDGCMACTGKDGQPVMKKHWDVTP HHHHCCHHHHHHHHCCEEECCCCCCEEEEECCCCHHHHHHEEECCCCCCCHHHHCCCCCC DDAKTMMEQAVWCPANREYFRGGGYSVHYVTRGGAPVTMMRLNIVKGLGPVLIVAEGWSV HHHHHHHHHHHCCCCCCHHHCCCCEEEEEEECCCCCEEHHHHHHHHCCCCEEEEECCCCC DLPAEVHKTLDERTDPGWPTTWFAPRLTGKGAFTDVYSVMANMGANHGAFTYGHIGADIL CCCHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHH TLASMLRIPVYAHNIPDDQIYRPSAWGLHGTADPEGADFRACANYGPLYGKY HHHHHHHCCCEECCCCCCCEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC >Mature Secondary Structure MKTALPTIGIRPTIDGRRLGVRESLEDQTMNMAKAAAALIEANIRHASGEPVKCVIADTC CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC IGGPAEAAACADKFKANNVGVSLAVTPCWCYGSETFDMDPFTPKAIWGFNGTERPGAVYL CCCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCEEH AAALAGLNQKGFPAFSIYGKDVQDATDTSIPEDVAEKILRFCRAGLAVATLRGKGYLSIG HHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEC GCSMGIAGSIVDQSFWENYLGIRVQAVDMTEVRRRMDQKIYDEAEFDLAMQWADSVFKFA CCCCCCHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDKNRPDLKLDEAGRRKTFRESVLMAMIFRDMMQGNPKLKKIDREEESLGYQAIAGGFQG HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHCCHHHHHCCCCC QRHWTDFYPNGDIAETLLNSTFDWNGPRAPLPFATENDSLNGACLLFGYLLTGQANVFAD CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEH VRTYWSPEAVKRVTGYTLEGHAKDGIIHLINSGSAALDGCMACTGKDGQPVMKKHWDVTP HHHHCCHHHHHHHHCCEEECCCCCCEEEEECCCCHHHHHHEEECCCCCCCHHHHCCCCCC DDAKTMMEQAVWCPANREYFRGGGYSVHYVTRGGAPVTMMRLNIVKGLGPVLIVAEGWSV HHHHHHHHHHHCCCCCCHHHCCCCEEEEEEECCCCCEEHHHHHHHHCCCCEEEEECCCCC DLPAEVHKTLDERTDPGWPTTWFAPRLTGKGAFTDVYSVMANMGANHGAFTYGHIGADIL CCCHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHH TLASMLRIPVYAHNIPDDQIYRPSAWGLHGTADPEGADFRACANYGPLYGKY HHHHHHHCCCEECCCCCCCEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA