Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is yccK [H]
Identifier: 187736289
GI number: 187736289
Start: 2189364
End: 2190482
Strand: Direct
Name: yccK [H]
Synonym: Amuc_1802
Alternate gene names: 187736289
Gene position: 2189364-2190482 (Clockwise)
Preceding gene: 187736288
Following gene: 187736290
Centisome position: 82.18
GC content: 57.91
Gene sequence:
>1119_bases ATGAAACGCAAGGATTTTTTGAAGATAACATCCGGTTTGGCCTTATCCCTGGTTTCCCGGGGATGGGCCGGGGTGGGTTC TTCTTTGCTGTCTGACGGTCCGGGGTCTTCTTCCGGGGTGCCGAAGAAGGGTTTTCTTGGGGAATCCCGGCGCCTTGGAG GCCTGGAAGTTTCCTCTATCGGGCTGGGATGCCTGCCGATGGTGGGTTATTACGGCGGCAAGTATGATAAACAGGAGATG ATTGCCCTGATACGCCGGGCTTTTGACAAAGGAGTTACTTTTTTTGATACGGCGGAAGTGTACGGGCCTTATACCAGTGA GGAATGGGTGGGGGAGGCTCTCGCCCCTGTCCGCAACCAGGTCAGGATAGGAACCAAATTCGGTTTTGGCGTGGAGGAAG GCCGTCCTTCTTCCCTGAACAGCAGGCCCGACCATATCCGGCGTGCGGTAGAAGGTTCCCTCAGGCGTTTGCGTACCGAC CACATTGACCTGTTTTACCAGCACCGGGTGGACCCGGATGTTCCGATGGAGGAGGTGGCAGGTACGGTGAAGGAACTGAT GCAGGAGGGAAAAGTGCTGCATTTCGGCCTGTCCGAAGCCGGCGCCCGTTCCATCAGGAGGGCTTATGCCGAGTGTCCGG TGAGCGCCGTCCAGAGCGAATACGCTATCTGGTGGAGGGAACCGGAGACGAAGATTTTTCCCACGTTGGAAGAGTTGGGC ATCGGTTTTGTTCCGTATTGTCCGCTGGGGCGCGCCTTTCTGGCAGGAGCCGTCCGGGAGGACAGCCGTTTTCAAAAGCG GGACCGCCGCGCCACTTTGCCCCGGTTTACTCCGGAAGCCCTCAGATTCAACATGCCGCTGACTGTTCTTGTCCGGGAAT GGGCGGAACGCAGGGGCATGACTCCGGCCCAGTTCGCCCTGTCCTGGATGCTTTCCCGGAAACCGTGGATTGCGCCTGTT CCCGGAACAACCAATCCAGCCCATCTGGATGATTTTCTGGGAGGGGCTTCCGTCCGCCTGTCCGAATCGGAACTCAAGGA ATTCGACCTTGCCTGTTCCAGAATTCCCCTGATGGGGCACCGGGCGGATCCGTTTACGGAGAGCCAGATTGACAAGTAG
Upstream 100 bases:
>100_bases AGCCGGTGTCATTCCTTTCGACAGAATCGGACAGTTCTTTCTGGAGCATCTGAAATAAGGAGGCCCCGCATCTGAATTTG GGAAAGAAAGACGGAACGTA
Downstream 100 bases:
>100_bases TTTTGCCGGCGCGTTTCCTTCCGCTCCGGAAAAATGCCGCGGGACTGTTTGCGGCGGAAGGATGTTAAGCTATTTTTAAG AAAGAGACATATGATTCTGA
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MKRKDFLKITSGLALSLVSRGWAGVGSSLLSDGPGSSSGVPKKGFLGESRRLGGLEVSSIGLGCLPMVGYYGGKYDKQEM IALIRRAFDKGVTFFDTAEVYGPYTSEEWVGEALAPVRNQVRIGTKFGFGVEEGRPSSLNSRPDHIRRAVEGSLRRLRTD HIDLFYQHRVDPDVPMEEVAGTVKELMQEGKVLHFGLSEAGARSIRRAYAECPVSAVQSEYAIWWREPETKIFPTLEELG IGFVPYCPLGRAFLAGAVREDSRFQKRDRRATLPRFTPEALRFNMPLTVLVREWAERRGMTPAQFALSWMLSRKPWIAPV PGTTNPAHLDDFLGGASVRLSESELKEFDLACSRIPLMGHRADPFTESQIDK
Sequences:
>Translated_372_residues MKRKDFLKITSGLALSLVSRGWAGVGSSLLSDGPGSSSGVPKKGFLGESRRLGGLEVSSIGLGCLPMVGYYGGKYDKQEM IALIRRAFDKGVTFFDTAEVYGPYTSEEWVGEALAPVRNQVRIGTKFGFGVEEGRPSSLNSRPDHIRRAVEGSLRRLRTD HIDLFYQHRVDPDVPMEEVAGTVKELMQEGKVLHFGLSEAGARSIRRAYAECPVSAVQSEYAIWWREPETKIFPTLEELG IGFVPYCPLGRAFLAGAVREDSRFQKRDRRATLPRFTPEALRFNMPLTVLVREWAERRGMTPAQFALSWMLSRKPWIAPV PGTTNPAHLDDFLGGASVRLSESELKEFDLACSRIPLMGHRADPFTESQIDK >Mature_372_residues MKRKDFLKITSGLALSLVSRGWAGVGSSLLSDGPGSSSGVPKKGFLGESRRLGGLEVSSIGLGCLPMVGYYGGKYDKQEM IALIRRAFDKGVTFFDTAEVYGPYTSEEWVGEALAPVRNQVRIGTKFGFGVEEGRPSSLNSRPDHIRRAVEGSLRRLRTD HIDLFYQHRVDPDVPMEEVAGTVKELMQEGKVLHFGLSEAGARSIRRAYAECPVSAVQSEYAIWWREPETKIFPTLEELG IGFVPYCPLGRAFLAGAVREDSRFQKRDRRATLPRFTPEALRFNMPLTVLVREWAERRGMTPAQFALSWMLSRKPWIAPV PGTTNPAHLDDFLGGASVRLSESELKEFDLACSRIPLMGHRADPFTESQIDK
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436966, Length=329, Percent_Identity=27.6595744680851, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI27436964, Length=318, Percent_Identity=27.9874213836478, Blast_Score=109, Evalue=5e-24, Organism=Homo sapiens, GI27436962, Length=318, Percent_Identity=27.9874213836478, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI27436969, Length=341, Percent_Identity=26.9794721407625, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI4504825, Length=329, Percent_Identity=27.6595744680851, Blast_Score=106, Evalue=4e-23, Organism=Homo sapiens, GI27436971, Length=318, Percent_Identity=27.0440251572327, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI223718702, Length=225, Percent_Identity=30.2222222222222, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI41152114, Length=229, Percent_Identity=30.1310043668122, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI41327764, Length=199, Percent_Identity=29.6482412060301, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1789375, Length=315, Percent_Identity=28.8888888888889, Blast_Score=124, Evalue=7e-30, Organism=Escherichia coli, GI87081735, Length=319, Percent_Identity=27.8996865203762, Blast_Score=121, Evalue=7e-29, Organism=Escherichia coli, GI1787674, Length=307, Percent_Identity=30.2931596091205, Blast_Score=114, Evalue=9e-27, Organism=Escherichia coli, GI1788070, Length=310, Percent_Identity=28.7096774193548, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI48994888, Length=128, Percent_Identity=40.625, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1788081, Length=297, Percent_Identity=25.5892255892256, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1789199, Length=334, Percent_Identity=25.1497005988024, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6325169, Length=343, Percent_Identity=27.4052478134111, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6323998, Length=320, Percent_Identity=25.625, Blast_Score=97, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6319958, Length=292, Percent_Identity=24.3150684931507, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6319951, Length=242, Percent_Identity=28.9256198347107, Blast_Score=90, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6322615, Length=246, Percent_Identity=26.0162601626016, Blast_Score=81, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6325384, Length=298, Percent_Identity=23.489932885906, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI24640980, Length=351, Percent_Identity=25.6410256410256, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI45549126, Length=345, Percent_Identity=25.7971014492754, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24646159, Length=222, Percent_Identity=28.3783783783784, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI24646155, Length=158, Percent_Identity=32.9113924050633, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 41414; Mature: 41414
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKDFLKITSGLALSLVSRGWAGVGSSLLSDGPGSSSGVPKKGFLGESRRLGGLEVSSI CCCHHHHHHHHHHHHHHHHHCCHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEHHC GLGCLPMVGYYGGKYDKQEMIALIRRAFDKGVTFFDTAEVYGPYTSEEWVGEALAPVRNQ CCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECHHHCCCCCCHHHHHHHHHHHHHH VRIGTKFGFGVEEGRPSSLNSRPDHIRRAVEGSLRRLRTDHIDLFYQHRVDPDVPMEEVA EEECCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH GTVKELMQEGKVLHFGLSEAGARSIRRAYAECPVSAVQSEYAIWWREPETKIFPTLEELG HHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCCCCCHHHCC IGFVPYCPLGRAFLAGAVREDSRFQKRDRRATLPRFTPEALRFNMPLTVLVREWAERRGM CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCHHHHHHHHHHHCCC TPAQFALSWMLSRKPWIAPVPGTTNPAHLDDFLGGASVRLSESELKEFDLACSRIPLMGH CHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCCCC RADPFTESQIDK CCCCCCHHCCCC >Mature Secondary Structure MKRKDFLKITSGLALSLVSRGWAGVGSSLLSDGPGSSSGVPKKGFLGESRRLGGLEVSSI CCCHHHHHHHHHHHHHHHHHCCHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEHHC GLGCLPMVGYYGGKYDKQEMIALIRRAFDKGVTFFDTAEVYGPYTSEEWVGEALAPVRNQ CCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECHHHCCCCCCHHHHHHHHHHHHHH VRIGTKFGFGVEEGRPSSLNSRPDHIRRAVEGSLRRLRTDHIDLFYQHRVDPDVPMEEVA EEECCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH GTVKELMQEGKVLHFGLSEAGARSIRRAYAECPVSAVQSEYAIWWREPETKIFPTLEELG HHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCCCCCHHHCC IGFVPYCPLGRAFLAGAVREDSRFQKRDRRATLPRFTPEALRFNMPLTVLVREWAERRGM CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCHHHHHHHHHHHCCC TPAQFALSWMLSRKPWIAPVPGTTNPAHLDDFLGGASVRLSESELKEFDLACSRIPLMGH CHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCCCC RADPFTESQIDK CCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]