Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187736290
Identifier: 187736290
GI number: 187736290
Start: 2190573
End: 2191709
Strand: Direct
Name: 187736290
Synonym: Amuc_1803
Alternate gene names: NA
Gene position: 2190573-2191709 (Clockwise)
Preceding gene: 187736289
Following gene: 187736291
Centisome position: 82.23
GC content: 57.96
Gene sequence:
>1137_bases ATGATTCTGATTTTCGGAGCATTGCTGGCGGTTTACGTTTTTTGCCGCGCTATTTTGCCGCTGAAGCTGAAATGGGGCTG GAAGCTTCTGCTTGCCGCCCTGCTGGCGGTGGCGGCATTCAAATTCCACTTGCTGCATTTGTTTGGAGGCCCCATGTTTT TCTCCCCGGTTTTGCCGGAAAACGTTCTGCTGGCGGCCGCGTGGCTGTTCTCCGTTCTTTTCCTGTTCTTTTTCCTGCTG CTGGCGGCAGATGTGGTGCGGGCTCTGTATCTGCTGGTTTTGTTCTGCTTGCGGAGGAACAGGACGGAAAGGTTCCGCAT CATTGGCAACCGGGTGAATGTTGCTTTGCTGGTTTTTTCCGCCGTGCTGGCAACTGTGGGCATGATTGGAGGCACCAGAG TGCCCCAGGTGAAGGAGGAAACGGTTGCCGTGAACCGCCTGCCGGAGGAGGCGGACGGATTGACGGTCGCCGTGCTGGCG GATCTGCATGTGGACGGCATTACAAGGGAGGAGCGCATTCGGAAGATTGTGGAGCGCACGAACGCCCTGAATCCGGACAT CGTCGTGATTGCCGGAGATTTCGTGGACGGGACGGTGCCCGTGCATGGCGGCGATTTGAGGCCGCTTGCGGATTTGAAGG CCAGATACGGGGTGTTCGGCGTGCCGGGCAATCATGAGTATTACTCCGGTTATGAGGAGTGGATGGAGTTCCTGCCCAAT CTGGGCATTCGTATGCTTCTTAATGAACACGCGCCGGTGGGAGGGGAGGCCGTGGTATTGGCCGGTGTGACGGATCCTGT GGCCGGCATCATGGGGAAGGAGGAGCCGGATATAAGCAAGGCGTTGAAGGATGCCCCGGAAAAGGGAGTGCGCATCCTTG TTTCCCACCAGCCGCAGCTGGCCCGGGAAGCGGCTGCGCACGGCGTGGATCTTCAAGTGTCCGGCCATACGCACGGAGGC ATGATTGCCGGCGTGGACCGGCTGGTGGCGCGTTTTAACGAGGGATTCGTCTCCGGGCTGTACACGGTGGGTAATATGAA GCTGTACGTTTCCAATGGGGCGGGGATTTGGAACGGCTTTCCCATCCGCATCGGCGTTCCATCGGAAATTGTTCTGATTC GGCTTCGGAAAGAATAA
Upstream 100 bases:
>100_bases TGACAAGTAGTTTTGCCGGCGCGTTTCCTTCCGCTCCGGAAAAATGCCGCGGGACTGTTTGCGGCGGAAGGATGTTAAGC TATTTTTAAGAAAGAGACAT
Downstream 100 bases:
>100_bases CATCATATATTGATAAAGCAATTTAGGAAGTGATGCGGGCAGGATTGCCGGAATTGTTGAAAAAATATTGACTTATAGTT ACTCTAATGTTTAGACAGAA
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MILIFGALLAVYVFCRAILPLKLKWGWKLLLAALLAVAAFKFHLLHLFGGPMFFSPVLPENVLLAAAWLFSVLFLFFFLL LAADVVRALYLLVLFCLRRNRTERFRIIGNRVNVALLVFSAVLATVGMIGGTRVPQVKEETVAVNRLPEEADGLTVAVLA DLHVDGITREERIRKIVERTNALNPDIVVIAGDFVDGTVPVHGGDLRPLADLKARYGVFGVPGNHEYYSGYEEWMEFLPN LGIRMLLNEHAPVGGEAVVLAGVTDPVAGIMGKEEPDISKALKDAPEKGVRILVSHQPQLAREAAAHGVDLQVSGHTHGG MIAGVDRLVARFNEGFVSGLYTVGNMKLYVSNGAGIWNGFPIRIGVPSEIVLIRLRKE
Sequences:
>Translated_378_residues MILIFGALLAVYVFCRAILPLKLKWGWKLLLAALLAVAAFKFHLLHLFGGPMFFSPVLPENVLLAAAWLFSVLFLFFFLL LAADVVRALYLLVLFCLRRNRTERFRIIGNRVNVALLVFSAVLATVGMIGGTRVPQVKEETVAVNRLPEEADGLTVAVLA DLHVDGITREERIRKIVERTNALNPDIVVIAGDFVDGTVPVHGGDLRPLADLKARYGVFGVPGNHEYYSGYEEWMEFLPN LGIRMLLNEHAPVGGEAVVLAGVTDPVAGIMGKEEPDISKALKDAPEKGVRILVSHQPQLAREAAAHGVDLQVSGHTHGG MIAGVDRLVARFNEGFVSGLYTVGNMKLYVSNGAGIWNGFPIRIGVPSEIVLIRLRKE >Mature_378_residues MILIFGALLAVYVFCRAILPLKLKWGWKLLLAALLAVAAFKFHLLHLFGGPMFFSPVLPENVLLAAAWLFSVLFLFFFLL LAADVVRALYLLVLFCLRRNRTERFRIIGNRVNVALLVFSAVLATVGMIGGTRVPQVKEETVAVNRLPEEADGLTVAVLA DLHVDGITREERIRKIVERTNALNPDIVVIAGDFVDGTVPVHGGDLRPLADLKARYGVFGVPGNHEYYSGYEEWMEFLPN LGIRMLLNEHAPVGGEAVVLAGVTDPVAGIMGKEEPDISKALKDAPEKGVRILVSHQPQLAREAAAHGVDLQVSGHTHGG MIAGVDRLVARFNEGFVSGLYTVGNMKLYVSNGAGIWNGFPIRIGVPSEIVLIRLRKE
Specific function: Unknown
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
Organism=Homo sapiens, GI210031196, Length=381, Percent_Identity=29.9212598425197, Blast_Score=135, Evalue=5e-32, Organism=Homo sapiens, GI210031210, Length=282, Percent_Identity=31.2056737588652, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI115535030, Length=274, Percent_Identity=34.6715328467153, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI115535028, Length=274, Percent_Identity=34.6715328467153, Blast_Score=139, Evalue=2e-33, Organism=Caenorhabditis elegans, GI71996034, Length=278, Percent_Identity=29.8561151079137, Blast_Score=110, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 41327; Mature: 41327
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILIFGALLAVYVFCRAILPLKLKWGWKLLLAALLAVAAFKFHLLHLFGGPMFFSPVLPE CEEEHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCH NVLLAAAWLFSVLFLFFFLLLAADVVRALYLLVLFCLRRNRTERFRIIGNRVNVALLVFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH AVLATVGMIGGTRVPQVKEETVAVNRLPEEADGLTVAVLADLHVDGITREERIRKIVERT HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHH NALNPDIVVIAGDFVDGTVPVHGGDLRPLADLKARYGVFGVPGNHEYYSGYEEWMEFLPN CCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHCCEECCCCCCHHHCCHHHHHHHHHC LGIRMLLNEHAPVGGEAVVLAGVTDPVAGIMGKEEPDISKALKDAPEKGVRILVSHQPQL CCEEEEECCCCCCCCCEEEEEECCCHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECCCHH AREAAAHGVDLQVSGHTHGGMIAGVDRLVARFNEGFVSGLYTVGNMKLYVSNGAGIWNGF HHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHEEECCEEEEEECCCCCCCCE PIRIGVPSEIVLIRLRKE EEEECCCCEEEEEEEECC >Mature Secondary Structure MILIFGALLAVYVFCRAILPLKLKWGWKLLLAALLAVAAFKFHLLHLFGGPMFFSPVLPE CEEEHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCH NVLLAAAWLFSVLFLFFFLLLAADVVRALYLLVLFCLRRNRTERFRIIGNRVNVALLVFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH AVLATVGMIGGTRVPQVKEETVAVNRLPEEADGLTVAVLADLHVDGITREERIRKIVERT HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHH NALNPDIVVIAGDFVDGTVPVHGGDLRPLADLKARYGVFGVPGNHEYYSGYEEWMEFLPN CCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHCCEECCCCCCHHHCCHHHHHHHHHC LGIRMLLNEHAPVGGEAVVLAGVTDPVAGIMGKEEPDISKALKDAPEKGVRILVSHQPQL CCEEEEECCCCCCCCCEEEEEECCCHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECCCHH AREAAAHGVDLQVSGHTHGGMIAGVDRLVARFNEGFVSGLYTVGNMKLYVSNGAGIWNGF HHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHEEECCEEEEEECCCCCCCCE PIRIGVPSEIVLIRLRKE EEEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]