Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736281

Identifier: 187736281

GI number: 187736281

Start: 2181989

End: 2182795

Strand: Reverse

Name: 187736281

Synonym: Amuc_1794

Alternate gene names: NA

Gene position: 2182795-2181989 (Counterclockwise)

Preceding gene: 187736297

Following gene: 187736280

Centisome position: 81.93

GC content: 55.51

Gene sequence:

>807_bases
ATGACACCGACAAAAGGGGATGTGAAACACTGGTTGAAGGCCATTGGGAAAAACCGTGACTGGCTTGCCATGGAATGCGG
TACGGAAAAAGGTACGGTGAATAACTGGCTCTCCCCCTCCGGCCCCTTCCCCGCCAGCGCCATGTTGAAAATCCAATCCC
TGATGTCTCAATACAAAACGGTTCGACCGGAAGACGAACCTGTCCAGACCAATCGCCTCGTGCTGGAAATCACGGAAGAG
CGCATGAGGAAATATGAACGGGCCGCCTCTGAAAAAGGCGTCCCCCTCCGCCAGTGGCTGACGGATTTGGCAGACGAAGC
GGCGGAGGAACGCCAGCTGCGGCCAATGCACTCTCCCCTGGTTCCCCTGGTCAGACAATTTCCGTCCCATGCTGGACACG
CCAGGCGTGAATACAGTACGCAAATAATCGGCAACATCGCCGCAGGCTCTCTTGCGGAAAGCGACACCGTCCCGTCTACC
ATTTACATGGAAAGGCCCCTGGGTAAAAACGAATACGTGGTCCGCGTAGAAGGGAAATCCATGGAACCCCTCATCCCGGA
CGGCTCCCTGGTAATTATGCGGCGCCATACCGCCCCGCCCATCCCCAAACCGGGAACCATCGTGGAATACAACGACGGAC
GCGGCGTTACGCTGAAAAAACTGATTCGCAGGAAAAACGCGGAAACAGGAAAAACGGAATACGTGCTGCAGCCCATCAAC
CCCGCATTCAAGGACATAACCCCCATGGACGGCGGCAGTATCTCCGGAATATATATGGAAACCCTTGTAAACTACCGCAA
AGGCTGA

Upstream 100 bases:

>100_bases
GCGCCTTTTTAACGATTTTCGTTAATACATCAACACATTTTAACGAATTCAATTTATTTCTTTCTATCGACAATTCACGA
AAATCGTGTATAATCAAGCC

Downstream 100 bases:

>100_bases
GCATTCGCCCCTGCCAGGCCCTTTTCCCATTCCGGAAAAAACGCCTCAGCGCAGAAAAGCGGGCAGGAAACTCCTGTTTC
CGGAAATCGGACGGGCAGCA

Product: peptidase S24 and S26 domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MTPTKGDVKHWLKAIGKNRDWLAMECGTEKGTVNNWLSPSGPFPASAMLKIQSLMSQYKTVRPEDEPVQTNRLVLEITEE
RMRKYERAASEKGVPLRQWLTDLADEAAEERQLRPMHSPLVPLVRQFPSHAGHARREYSTQIIGNIAAGSLAESDTVPST
IYMERPLGKNEYVVRVEGKSMEPLIPDGSLVIMRRHTAPPIPKPGTIVEYNDGRGVTLKKLIRRKNAETGKTEYVLQPIN
PAFKDITPMDGGSISGIYMETLVNYRKG

Sequences:

>Translated_268_residues
MTPTKGDVKHWLKAIGKNRDWLAMECGTEKGTVNNWLSPSGPFPASAMLKIQSLMSQYKTVRPEDEPVQTNRLVLEITEE
RMRKYERAASEKGVPLRQWLTDLADEAAEERQLRPMHSPLVPLVRQFPSHAGHARREYSTQIIGNIAAGSLAESDTVPST
IYMERPLGKNEYVVRVEGKSMEPLIPDGSLVIMRRHTAPPIPKPGTIVEYNDGRGVTLKKLIRRKNAETGKTEYVLQPIN
PAFKDITPMDGGSISGIYMETLVNYRKG
>Mature_267_residues
TPTKGDVKHWLKAIGKNRDWLAMECGTEKGTVNNWLSPSGPFPASAMLKIQSLMSQYKTVRPEDEPVQTNRLVLEITEER
MRKYERAASEKGVPLRQWLTDLADEAAEERQLRPMHSPLVPLVRQFPSHAGHARREYSTQIIGNIAAGSLAESDTVPSTI
YMERPLGKNEYVVRVEGKSMEPLIPDGSLVIMRRHTAPPIPKPGTIVEYNDGRGVTLKKLIRRKNAETGKTEYVLQPINP
AFKDITPMDGGSISGIYMETLVNYRKG

Specific function: Unknown

COG id: COG1974

COG function: function code KT; SOS-response transcriptional repressors (RecA-mediated autopeptidases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30065; Mature: 29934

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTKGDVKHWLKAIGKNRDWLAMECGTEKGTVNNWLSPSGPFPASAMLKIQSLMSQYKT
CCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VRPEDEPVQTNRLVLEITEERMRKYERAASEKGVPLRQWLTDLADEAAEERQLRPMHSPL
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHH
VPLVRQFPSHAGHARREYSTQIIGNIAAGSLAESDTVPSTIYMERPLGKNEYVVRVEGKS
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEECCCC
MEPLIPDGSLVIMRRHTAPPIPKPGTIVEYNDGRGVTLKKLIRRKNAETGKTEYVLQPIN
CCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCC
PAFKDITPMDGGSISGIYMETLVNYRKG
HHHHHCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TPTKGDVKHWLKAIGKNRDWLAMECGTEKGTVNNWLSPSGPFPASAMLKIQSLMSQYKT
CCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VRPEDEPVQTNRLVLEITEERMRKYERAASEKGVPLRQWLTDLADEAAEERQLRPMHSPL
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHH
VPLVRQFPSHAGHARREYSTQIIGNIAAGSLAESDTVPSTIYMERPLGKNEYVVRVEGKS
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEECCCC
MEPLIPDGSLVIMRRHTAPPIPKPGTIVEYNDGRGVTLKKLIRRKNAETGKTEYVLQPIN
CCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCC
PAFKDITPMDGGSISGIYMETLVNYRKG
HHHHHCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA