Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736275

Identifier: 187736275

GI number: 187736275

Start: 2175508

End: 2177031

Strand: Direct

Name: 187736275

Synonym: Amuc_1788

Alternate gene names: NA

Gene position: 2175508-2177031 (Clockwise)

Preceding gene: 187736274

Following gene: 187736276

Centisome position: 81.66

GC content: 59.71

Gene sequence:

>1524_bases
ATGTTTGATCTTCCCCACAACTTTGGCGATTACACGCTGGTGGCATTTATTGGCCGCACGCGCGGAGGAATTCTTTATCA
GGCCATCCAGCAGGGCATGGACCGTTCCGTGTTTCTGGAGTTGCTGGATCCGGACAATCCGGAGGGGGTGGGCGTGGAGG
ATTTTCTGATGAAGGCCCGCACGCGCGCCGCCATTAATGCTCCGGTGCTGGGCACCGTCTATGAAGCGTCCCAGGCCCAG
GGATACTGGTTCGTCACCAGCGAACAGCTGGGAGGCTCATCCCTCCAGTCCATGCTGGACCGCGGGCAGACCCTGTCCAT
GAAGGATTTGCTGAAGGTGATTGAAACGGTCGGCAACGTGTGCGGCAGGTATGAGCGTCTGCGGACCGCTTTCAATATCA
TGGAGCCGCGTCACATTTTCCTGGATGACAAGTCTGCCGTGCGGCTGATGAATACGGCCGTGCCCGGTGACTTTCACGAA
GAAACATCCCGCGACCAGATGAAGCGCCTGGGCATCGACCTGCCTCCTCTGGTGACTCCGGATGTGCCCGGAACCACGCG
GATGCGCACCCTGCTGGAATGGATGAGAGAAGGGCAGAACGGAAAGCCGATGCAATGGGACCAGGTTATGGAGCTGGTTG
CTGCGGTCCGCGAACAGCTGGGGCTTTCCCCTCGGGTTACCACCCACCGCTATACCGTCCCCGTGGAATCCCGCAGAAAA
GCCGGAAAAAAGCTGCTTTGGGCCGGAATGGGCCTGCTGGGCGTGGGGATAGCCGCGGCTGCCGTTCTTCTTTTATTCCC
CCGGGAGAAGGAAACCGTATCCCGTCCCCATGTTCCGGCTCCTAAACATTATCCGGATTTTTCCTCCAGCGATCATACGG
AAGTCCGCGTAACTCTTCCCGGAGGAGGGGAACTGATTGTGGGAGCCCATGAAATTACCCTGGAATCCTACCGCCTGTTT
TTGGACCAGTGGGCACGCCTCACTCCGGAGCTGAGGGAGGAATATTCCCACCCGGACCAGCCGGACAAGAGGACTGCCTC
CCATATTCCCCAGGACTGGGAGGCTATGTGGAAGGCGGCTTCCACTCCGGGAGGCAAATGGAAAGGCAGGAAAATAACAC
CCCGCTCTCCCGTCGTCAACGTCACTTTCTGGGATGCCTGGGCGTATGCGAGCTGGAAGCCCGTGGCCCCCGGAGAACCG
CGCTACCGCCTGCCCGAGCGCGGGGAGTGGATGGCTCTGGGGAATATGCTGGAAACGGGTGAGAAGGGGGACAGGACGCT
GGTGATTGACAGATACAGCAATGATCATGATTTAAAGACCGGCGTGTGCGGCATGGCTTCCGGCGTGATGGAATGGACTT
CTTCCATGGAAAAGGATCCTGCGCGCGTGAAGGAGCCTCCGGGGCCGGTGGCCTGCGGCGGAGACTGGAGGCAGCCCGGC
ATCTCCAACCGGGTGGAATACCTGCGCTCCCGCGGTGAAAGCCGGGACAACCTGGGATTCAGAATCGTGCGGAATGTCCT
CTGA

Upstream 100 bases:

>100_bases
GCCCGAGATTTATGACGGCGGTTTGCTTCCTCCTGTAGAGGCGGCTCCGGTTTCTGAGTCTTATGAATCTCTTTTGCCTC
CCTGATGCCTGATTTGTCCA

Downstream 100 bases:

>100_bases
CCCGTTTAACGACAATACTTAACATATCAATACCATGAAACATATCCTTGCAATGCTGCTGGCCCTTCTGGGGGCGTCCG
GGGCCCTGGCCCAGATTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MFDLPHNFGDYTLVAFIGRTRGGILYQAIQQGMDRSVFLELLDPDNPEGVGVEDFLMKARTRAAINAPVLGTVYEASQAQ
GYWFVTSEQLGGSSLQSMLDRGQTLSMKDLLKVIETVGNVCGRYERLRTAFNIMEPRHIFLDDKSAVRLMNTAVPGDFHE
ETSRDQMKRLGIDLPPLVTPDVPGTTRMRTLLEWMREGQNGKPMQWDQVMELVAAVREQLGLSPRVTTHRYTVPVESRRK
AGKKLLWAGMGLLGVGIAAAAVLLLFPREKETVSRPHVPAPKHYPDFSSSDHTEVRVTLPGGGELIVGAHEITLESYRLF
LDQWARLTPELREEYSHPDQPDKRTASHIPQDWEAMWKAASTPGGKWKGRKITPRSPVVNVTFWDAWAYASWKPVAPGEP
RYRLPERGEWMALGNMLETGEKGDRTLVIDRYSNDHDLKTGVCGMASGVMEWTSSMEKDPARVKEPPGPVACGGDWRQPG
ISNRVEYLRSRGESRDNLGFRIVRNVL

Sequences:

>Translated_507_residues
MFDLPHNFGDYTLVAFIGRTRGGILYQAIQQGMDRSVFLELLDPDNPEGVGVEDFLMKARTRAAINAPVLGTVYEASQAQ
GYWFVTSEQLGGSSLQSMLDRGQTLSMKDLLKVIETVGNVCGRYERLRTAFNIMEPRHIFLDDKSAVRLMNTAVPGDFHE
ETSRDQMKRLGIDLPPLVTPDVPGTTRMRTLLEWMREGQNGKPMQWDQVMELVAAVREQLGLSPRVTTHRYTVPVESRRK
AGKKLLWAGMGLLGVGIAAAAVLLLFPREKETVSRPHVPAPKHYPDFSSSDHTEVRVTLPGGGELIVGAHEITLESYRLF
LDQWARLTPELREEYSHPDQPDKRTASHIPQDWEAMWKAASTPGGKWKGRKITPRSPVVNVTFWDAWAYASWKPVAPGEP
RYRLPERGEWMALGNMLETGEKGDRTLVIDRYSNDHDLKTGVCGMASGVMEWTSSMEKDPARVKEPPGPVACGGDWRQPG
ISNRVEYLRSRGESRDNLGFRIVRNVL
>Mature_507_residues
MFDLPHNFGDYTLVAFIGRTRGGILYQAIQQGMDRSVFLELLDPDNPEGVGVEDFLMKARTRAAINAPVLGTVYEASQAQ
GYWFVTSEQLGGSSLQSMLDRGQTLSMKDLLKVIETVGNVCGRYERLRTAFNIMEPRHIFLDDKSAVRLMNTAVPGDFHE
ETSRDQMKRLGIDLPPLVTPDVPGTTRMRTLLEWMREGQNGKPMQWDQVMELVAAVREQLGLSPRVTTHRYTVPVESRRK
AGKKLLWAGMGLLGVGIAAAAVLLLFPREKETVSRPHVPAPKHYPDFSSSDHTEVRVTLPGGGELIVGAHEITLESYRLF
LDQWARLTPELREEYSHPDQPDKRTASHIPQDWEAMWKAASTPGGKWKGRKITPRSPVVNVTFWDAWAYASWKPVAPGEP
RYRLPERGEWMALGNMLETGEKGDRTLVIDRYSNDHDLKTGVCGMASGVMEWTSSMEKDPARVKEPPGPVACGGDWRQPG
ISNRVEYLRSRGESRDNLGFRIVRNVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56951; Mature: 56951

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDLPHNFGDYTLVAFIGRTRGGILYQAIQQGMDRSVFLELLDPDNPEGVGVEDFLMKAR
CCCCCCCCCCEEEEEEHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHH
TRAAINAPVLGTVYEASQAQGYWFVTSEQLGGSSLQSMLDRGQTLSMKDLLKVIETVGNV
HHHHCCCCCEEHHHHHCCCCCEEEEECHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH
CGRYERLRTAFNIMEPRHIFLDDKSAVRLMNTAVPGDFHEETSRDQMKRLGIDLPPLVTP
HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCC
DVPGTTRMRTLLEWMREGQNGKPMQWDQVMELVAAVREQLGLSPRVTTHRYTVPVESRRK
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHH
AGKKLLWAGMGLLGVGIAAAAVLLLFPREKETVSRPHVPAPKHYPDFSSSDHTEVRVTLP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEC
GGGELIVGAHEITLESYRLFLDQWARLTPELREEYSHPDQPDKRTASHIPQDWEAMWKAA
CCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHC
STPGGKWKGRKITPRSPVVNVTFWDAWAYASWKPVAPGEPRYRLPERGEWMALGNMLETG
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
EKGDRTLVIDRYSNDHDLKTGVCGMASGVMEWTSSMEKDPARVKEPPGPVACGGDWRQPG
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEECCCCCCCCC
ISNRVEYLRSRGESRDNLGFRIVRNVL
HHHHHHHHHHCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MFDLPHNFGDYTLVAFIGRTRGGILYQAIQQGMDRSVFLELLDPDNPEGVGVEDFLMKAR
CCCCCCCCCCEEEEEEHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHH
TRAAINAPVLGTVYEASQAQGYWFVTSEQLGGSSLQSMLDRGQTLSMKDLLKVIETVGNV
HHHHCCCCCEEHHHHHCCCCCEEEEECHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH
CGRYERLRTAFNIMEPRHIFLDDKSAVRLMNTAVPGDFHEETSRDQMKRLGIDLPPLVTP
HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCC
DVPGTTRMRTLLEWMREGQNGKPMQWDQVMELVAAVREQLGLSPRVTTHRYTVPVESRRK
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHH
AGKKLLWAGMGLLGVGIAAAAVLLLFPREKETVSRPHVPAPKHYPDFSSSDHTEVRVTLP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEC
GGGELIVGAHEITLESYRLFLDQWARLTPELREEYSHPDQPDKRTASHIPQDWEAMWKAA
CCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHC
STPGGKWKGRKITPRSPVVNVTFWDAWAYASWKPVAPGEPRYRLPERGEWMALGNMLETG
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
EKGDRTLVIDRYSNDHDLKTGVCGMASGVMEWTSSMEKDPARVKEPPGPVACGGDWRQPG
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEECCCCCCCCC
ISNRVEYLRSRGESRDNLGFRIVRNVL
HHHHHHHHHHCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA