Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736276

Identifier: 187736276

GI number: 187736276

Start: 2177066

End: 2177908

Strand: Direct

Name: 187736276

Synonym: Amuc_1789

Alternate gene names: NA

Gene position: 2177066-2177908 (Clockwise)

Preceding gene: 187736275

Following gene: 187736282

Centisome position: 81.72

GC content: 56.47

Gene sequence:

>843_bases
ATGAAACATATCCTTGCAATGCTGCTGGCCCTTCTGGGGGCGTCCGGGGCCCTGGCCCAGATTTACGTGAAAGTAGTCCC
GGAAAAGAAGACGTTCCTCAGCGGGGAAGCCATGTACATGAGGCTGACCATTACCAACAATTCCGGCGTGCCGGTGGAGC
TGAAAAGCCGGGAATATTCCTCCTGGCTGGATATCCATGTGGAGCATTCCACTGCGGGGGCGGAACTCCCCCAGTCCAAA
TTTGCCCTGTTTCCGCCTCTCAAGGTTCCTGCCGGCATGAGCGTTTCCCGCAAGATTGACCTGCGCCATTTCTATGACTT
GTCCCGTGAGGGCAACTACCATGTGCAGGCCGTTGTAAAAATGCCCAACCAGAAGGACATGTTTGCTTCCCAGAAATCCC
TGTTTGCCGTCCGGACGGGAACACCCATGTGGTCCCAGACCGTGGCCATTCCGGCCAGTGCCAAGCGGTGCACTTTTTCC
ATTTGCACTATTGCCGTGCGGGGAATCCAGAAATTGTATGTGCAGACGAAGGATCCGGATACGGGAGTGGCCTACAATTC
CGTGTGCATCGGTGACTGGCTGGGGACCACGCGTCCGCAGTGCATGGTGGACGGCAAGGCGAATGTCCATGTCTTCTTCC
CCACTACCCCCATGCTGAGCGCGTATTCCCGCATCAACTACCGGGGAACCATGGAAAAGCTGCAGTACTATAAAAAGGTG
GTGGGAGCCCCCTCCATGGTCTTTCTTCCGGACGGAAGCGTACGTGTGACGGGAGCCGTCCATTATGATCCTACCGTGAA
ACCCAAGACGGTGCCGGATGCCGCTGATGTTCCCGGCATGTAA

Upstream 100 bases:

>100_bases
TACCTGCGCTCCCGCGGTGAAAGCCGGGACAACCTGGGATTCAGAATCGTGCGGAATGTCCTCTGACCCGTTTAACGACA
ATACTTAACATATCAATACC

Downstream 100 bases:

>100_bases
ATCCATCCTGTTTCGCCGGATGTCACGCAGGGGAAAAGGAAAGGAAAACGTACTGCTTCTTCCGTACCGGGAAAATAAGA
TATTCCGGTATTTTCCTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKHILAMLLALLGASGALAQIYVKVVPEKKTFLSGEAMYMRLTITNNSGVPVELKSREYSSWLDIHVEHSTAGAELPQSK
FALFPPLKVPAGMSVSRKIDLRHFYDLSREGNYHVQAVVKMPNQKDMFASQKSLFAVRTGTPMWSQTVAIPASAKRCTFS
ICTIAVRGIQKLYVQTKDPDTGVAYNSVCIGDWLGTTRPQCMVDGKANVHVFFPTTPMLSAYSRINYRGTMEKLQYYKKV
VGAPSMVFLPDGSVRVTGAVHYDPTVKPKTVPDAADVPGM

Sequences:

>Translated_280_residues
MKHILAMLLALLGASGALAQIYVKVVPEKKTFLSGEAMYMRLTITNNSGVPVELKSREYSSWLDIHVEHSTAGAELPQSK
FALFPPLKVPAGMSVSRKIDLRHFYDLSREGNYHVQAVVKMPNQKDMFASQKSLFAVRTGTPMWSQTVAIPASAKRCTFS
ICTIAVRGIQKLYVQTKDPDTGVAYNSVCIGDWLGTTRPQCMVDGKANVHVFFPTTPMLSAYSRINYRGTMEKLQYYKKV
VGAPSMVFLPDGSVRVTGAVHYDPTVKPKTVPDAADVPGM
>Mature_280_residues
MKHILAMLLALLGASGALAQIYVKVVPEKKTFLSGEAMYMRLTITNNSGVPVELKSREYSSWLDIHVEHSTAGAELPQSK
FALFPPLKVPAGMSVSRKIDLRHFYDLSREGNYHVQAVVKMPNQKDMFASQKSLFAVRTGTPMWSQTVAIPASAKRCTFS
ICTIAVRGIQKLYVQTKDPDTGVAYNSVCIGDWLGTTRPQCMVDGKANVHVFFPTTPMLSAYSRINYRGTMEKLQYYKKV
VGAPSMVFLPDGSVRVTGAVHYDPTVKPKTVPDAADVPGM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30840; Mature: 30840

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHILAMLLALLGASGALAQIYVKVVPEKKTFLSGEAMYMRLTITNNSGVPVELKSREYS
CHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEECCCEEEEEEEEECCCCCEEEECCCCCC
SWLDIHVEHSTAGAELPQSKFALFPPLKVPAGMSVSRKIDLRHFYDLSREGNYHVQAVVK
CEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEEECHHHHHCCCCCCCEEEEEEEE
MPNQKDMFASQKSLFAVRTGTPMWSQTVAIPASAKRCTFSICTIAVRGIQKLYVQTKDPD
CCCCHHHHHCCCCEEEEECCCCCCCCEEECCCCCCCEEHHHHHHHHHHHHEEEEEECCCC
TGVAYNSVCIGDWLGTTRPQCMVDGKANVHVFFPTTPMLSAYSRINYRGTMEKLQYYKKV
CCCEECCEEEECCCCCCCCCEEECCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHH
VGAPSMVFLPDGSVRVTGAVHYDPTVKPKTVPDAADVPGM
HCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKHILAMLLALLGASGALAQIYVKVVPEKKTFLSGEAMYMRLTITNNSGVPVELKSREYS
CHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEECCCEEEEEEEEECCCCCEEEECCCCCC
SWLDIHVEHSTAGAELPQSKFALFPPLKVPAGMSVSRKIDLRHFYDLSREGNYHVQAVVK
CEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEEECHHHHHCCCCCCCEEEEEEEE
MPNQKDMFASQKSLFAVRTGTPMWSQTVAIPASAKRCTFSICTIAVRGIQKLYVQTKDPD
CCCCHHHHHCCCCEEEEECCCCCCCCEEECCCCCCCEEHHHHHHHHHHHHEEEEEECCCC
TGVAYNSVCIGDWLGTTRPQCMVDGKANVHVFFPTTPMLSAYSRINYRGTMEKLQYYKKV
CCCEECCEEEECCCCCCCCCEEECCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHH
VGAPSMVFLPDGSVRVTGAVHYDPTVKPKTVPDAADVPGM
HCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA