Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736276
Identifier: 187736276
GI number: 187736276
Start: 2177066
End: 2177908
Strand: Direct
Name: 187736276
Synonym: Amuc_1789
Alternate gene names: NA
Gene position: 2177066-2177908 (Clockwise)
Preceding gene: 187736275
Following gene: 187736282
Centisome position: 81.72
GC content: 56.47
Gene sequence:
>843_bases ATGAAACATATCCTTGCAATGCTGCTGGCCCTTCTGGGGGCGTCCGGGGCCCTGGCCCAGATTTACGTGAAAGTAGTCCC GGAAAAGAAGACGTTCCTCAGCGGGGAAGCCATGTACATGAGGCTGACCATTACCAACAATTCCGGCGTGCCGGTGGAGC TGAAAAGCCGGGAATATTCCTCCTGGCTGGATATCCATGTGGAGCATTCCACTGCGGGGGCGGAACTCCCCCAGTCCAAA TTTGCCCTGTTTCCGCCTCTCAAGGTTCCTGCCGGCATGAGCGTTTCCCGCAAGATTGACCTGCGCCATTTCTATGACTT GTCCCGTGAGGGCAACTACCATGTGCAGGCCGTTGTAAAAATGCCCAACCAGAAGGACATGTTTGCTTCCCAGAAATCCC TGTTTGCCGTCCGGACGGGAACACCCATGTGGTCCCAGACCGTGGCCATTCCGGCCAGTGCCAAGCGGTGCACTTTTTCC ATTTGCACTATTGCCGTGCGGGGAATCCAGAAATTGTATGTGCAGACGAAGGATCCGGATACGGGAGTGGCCTACAATTC CGTGTGCATCGGTGACTGGCTGGGGACCACGCGTCCGCAGTGCATGGTGGACGGCAAGGCGAATGTCCATGTCTTCTTCC CCACTACCCCCATGCTGAGCGCGTATTCCCGCATCAACTACCGGGGAACCATGGAAAAGCTGCAGTACTATAAAAAGGTG GTGGGAGCCCCCTCCATGGTCTTTCTTCCGGACGGAAGCGTACGTGTGACGGGAGCCGTCCATTATGATCCTACCGTGAA ACCCAAGACGGTGCCGGATGCCGCTGATGTTCCCGGCATGTAA
Upstream 100 bases:
>100_bases TACCTGCGCTCCCGCGGTGAAAGCCGGGACAACCTGGGATTCAGAATCGTGCGGAATGTCCTCTGACCCGTTTAACGACA ATACTTAACATATCAATACC
Downstream 100 bases:
>100_bases ATCCATCCTGTTTCGCCGGATGTCACGCAGGGGAAAAGGAAAGGAAAACGTACTGCTTCTTCCGTACCGGGAAAATAAGA TATTCCGGTATTTTCCTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MKHILAMLLALLGASGALAQIYVKVVPEKKTFLSGEAMYMRLTITNNSGVPVELKSREYSSWLDIHVEHSTAGAELPQSK FALFPPLKVPAGMSVSRKIDLRHFYDLSREGNYHVQAVVKMPNQKDMFASQKSLFAVRTGTPMWSQTVAIPASAKRCTFS ICTIAVRGIQKLYVQTKDPDTGVAYNSVCIGDWLGTTRPQCMVDGKANVHVFFPTTPMLSAYSRINYRGTMEKLQYYKKV VGAPSMVFLPDGSVRVTGAVHYDPTVKPKTVPDAADVPGM
Sequences:
>Translated_280_residues MKHILAMLLALLGASGALAQIYVKVVPEKKTFLSGEAMYMRLTITNNSGVPVELKSREYSSWLDIHVEHSTAGAELPQSK FALFPPLKVPAGMSVSRKIDLRHFYDLSREGNYHVQAVVKMPNQKDMFASQKSLFAVRTGTPMWSQTVAIPASAKRCTFS ICTIAVRGIQKLYVQTKDPDTGVAYNSVCIGDWLGTTRPQCMVDGKANVHVFFPTTPMLSAYSRINYRGTMEKLQYYKKV VGAPSMVFLPDGSVRVTGAVHYDPTVKPKTVPDAADVPGM >Mature_280_residues MKHILAMLLALLGASGALAQIYVKVVPEKKTFLSGEAMYMRLTITNNSGVPVELKSREYSSWLDIHVEHSTAGAELPQSK FALFPPLKVPAGMSVSRKIDLRHFYDLSREGNYHVQAVVKMPNQKDMFASQKSLFAVRTGTPMWSQTVAIPASAKRCTFS ICTIAVRGIQKLYVQTKDPDTGVAYNSVCIGDWLGTTRPQCMVDGKANVHVFFPTTPMLSAYSRINYRGTMEKLQYYKKV VGAPSMVFLPDGSVRVTGAVHYDPTVKPKTVPDAADVPGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30840; Mature: 30840
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHILAMLLALLGASGALAQIYVKVVPEKKTFLSGEAMYMRLTITNNSGVPVELKSREYS CHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEECCCEEEEEEEEECCCCCEEEECCCCCC SWLDIHVEHSTAGAELPQSKFALFPPLKVPAGMSVSRKIDLRHFYDLSREGNYHVQAVVK CEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEEECHHHHHCCCCCCCEEEEEEEE MPNQKDMFASQKSLFAVRTGTPMWSQTVAIPASAKRCTFSICTIAVRGIQKLYVQTKDPD CCCCHHHHHCCCCEEEEECCCCCCCCEEECCCCCCCEEHHHHHHHHHHHHEEEEEECCCC TGVAYNSVCIGDWLGTTRPQCMVDGKANVHVFFPTTPMLSAYSRINYRGTMEKLQYYKKV CCCEECCEEEECCCCCCCCCEEECCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHH VGAPSMVFLPDGSVRVTGAVHYDPTVKPKTVPDAADVPGM HCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKHILAMLLALLGASGALAQIYVKVVPEKKTFLSGEAMYMRLTITNNSGVPVELKSREYS CHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEECCCEEEEEEEEECCCCCEEEECCCCCC SWLDIHVEHSTAGAELPQSKFALFPPLKVPAGMSVSRKIDLRHFYDLSREGNYHVQAVVK CEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEEECHHHHHCCCCCCCEEEEEEEE MPNQKDMFASQKSLFAVRTGTPMWSQTVAIPASAKRCTFSICTIAVRGIQKLYVQTKDPD CCCCHHHHHCCCCEEEEECCCCCCCCEEECCCCCCCEEHHHHHHHHHHHHEEEEEECCCC TGVAYNSVCIGDWLGTTRPQCMVDGKANVHVFFPTTPMLSAYSRINYRGTMEKLQYYKKV CCCEECCEEEECCCCCCCCCEEECCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHH VGAPSMVFLPDGSVRVTGAVHYDPTVKPKTVPDAADVPGM HCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA