Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736264
Identifier: 187736264
GI number: 187736264
Start: 2164464
End: 2166728
Strand: Reverse
Name: 187736264
Synonym: Amuc_1777
Alternate gene names: NA
Gene position: 2166728-2164464 (Counterclockwise)
Preceding gene: 187736265
Following gene: 187736263
Centisome position: 81.33
GC content: 56.07
Gene sequence:
>2265_bases ATGACTTTCCTTTATCCCAACGTTCTGTACGCGCTCATTCTCCCGGTCCTGCTCGCAGCGGCGGCCTGGTGGCTGTGGCG CCGCCGTTCCAGAAAATGGGAAGTGCTCGTTTCGCCGGAATACCGGCGGGAACTGGTTCACGCTCCGGCCACCTGGCACC GGGTGCTCCCCGTCATCTTTGCCGTGCTGGCGTCCATCTTCGCCATCCTCTCCATTGCGCGCCCGGTGGACGGCTACACG GAGGTAAAGGAAATCCCCAAATCGCGCAACATCCTCATTGCTATTGACTGCTCCCGTTCCATGCTCAGCAAGGATGCTTC CCCGACCCGCTTGGGAAGGGCAAAAACCGCCGCCTACGACCTGCTGGACGCCCTGCCGGGGGACAACTTCGGCATCATCA TCTTCTCCGGAGACGCCGTCCTGCTCATGCCCCTTACCCATGACCATAACGCATTAAAAGAAACCATTGAACAACTTCAA TTCGGCTGGGTCTCCCAAGGGGGAACCAACCTGGAAAACGTTGTGCGGCTGGCCCTTCAAACCTTCAAACGGGACAAGGA AGCGGACGCCAAAAACGCCCTGGTCATCCTCAGCGACGGGGAAGACACCGTCAACATCACCTATAAGACTGCGGAAGCCG CACGGCAGCACCAGCTTATCATCGTGACAGCGGGTATCGGTACTACTATCGGTACCACTATTCCGGATGAGCAATCCCCC TCCGGCCTGTACCGGGATCGTCGTGGCCAGCACGTCGTCTCCAAGCTCAATCCGGAAAGCCTGCAATACCTGGCCAGGCA AACGGAAGGCCAATATGTCCAACTCTCCGACGGAGCGGCGCTGAACCGCTTCGTCAAGGACATCGCGGACCGGCTGGATA CCACGGAAGGCAAGGAAGAAGTGCGCCGCGTGCCGAATGACCGCTACATCACCTTTGCCGTTCCGGCCCTCATCTGCCTG CTCCTCACCCTTCTGGCGGGAACACGCTGGCGTTCCTTCCGCCGTTCCGGACGCCGCGGTATGACATCTCTGACTGCTGC GGCGTTATTCTGCGCCGGACTGCTGGGCCAGGAAGCGCAGGCGGACACGCACGCCCTGGACAATGTCACGGATTTGATCC GGACGGGAAAAACGGAAGAAGCCGTCAAATCCATTGATGAAATGCTCGCTGTTCCCGACCTGGCGGAAGAAACGCGCCAG GCCTTGGAATTCGCCAAAGGATGCCTGGAACAAAAAGCGGATAACCCCAAAGAAGCCGCGGAAGCTTTCTCCCAGGCGCT CCTTTCTCCCAAACCAGCCCTCCAGGCGGATTCCCACTTCAACCTTGGCAACCTGGAAGCCGCCCAGGCCCGCAAGACCA TGACTTTCTCCAGGCCGGAAGGGGAACAGCAGCAAGCCCGGCTCTCTTCCATTGACGACCAAATTAAGGAAATTGATGCC CGGCTGGCAAAAATACCCGTTGCGAAAAAACATGTTAAAGAGGCCGTCAAACGTTTTGACGATGCGCTCTCTGCCTATGG TTCCCATGAAGGAGCAGCGTCCAACAAGGAGGAAATGCTCCGTTATGATAAATCCTTGGACGAATACCGCCGGCAGCTGG AAGAATTAAAGAAGAAATTGGAAGAAGAGAAGAAAAAACAACAGGACCAGAACAAGGACCAGAACAAGGACCAGAACAAG GACCAGAACAAGGACCAGAACAAGGACCAGAACAAGGACCAGAACAAGGACCAGAACAAGGACCAGAACAAGGACCAGAA CAAGGACCAGAACAAGGACCAGAACAAGGACCAGAACAAGGACCAGAACAAGGACCAGAACAAGGACCAGAACAAGGACC AGAACAAGGACCAGAACAAGGACCAGAACAAGGACCAGAACAAGGACCAGAACAAGGACCAGAACAAGGACCAGAACAAG GACCAGAACAAGGACCAAGACAAGGACCAAGACAAGGACCAAGACAAGGACCAAGACAAGGATAACGCCGAAACCAAGGA AGGCAAGAGGGACGAAAATGAAATGAAAAACGCCCGGCTTCCCTCCTCTCCGGAAAAAGACAGGCTGCCAGAAACGTCCG GAATGGAAAAACCGCAGCCCCAGCCGGAAGATAACAAGCCCGTTCCGGCAGCCGCACAAAAGGAAAGCAGGGAGGAAAAG GAACGCAGGGAAGCAAGAGCCATCCTGATGGAACGCAGGGACATTGAACCCGGCTGCCCCGTTCCCCAGCGTTCTCCGGA AATTCCTCCGGATAAGGATTACTAA
Upstream 100 bases:
>100_bases CATGTACTTCCTTGTAACGGGAGCCGCGCTGGCGCTTCTGGGCCTCTCCCTGCAAGTGCTCAAACCGGCCCCCGCCCCGT AATACCGATCTTCACCCGTC
Downstream 100 bases:
>100_bases CCCGTTCCGCCCGCATCCGCGAAGCCACCCCTTTAAACATATCCCGCAAAACAAGATGAAAAAACTGCTCGCCATTCTTT CGCTTTTCTTCTGCATGACT
Product: von Willebrand factor type A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 754; Mature: 753
Protein sequence:
>754_residues MTFLYPNVLYALILPVLLAAAAWWLWRRRSRKWEVLVSPEYRRELVHAPATWHRVLPVIFAVLASIFAILSIARPVDGYT EVKEIPKSRNILIAIDCSRSMLSKDASPTRLGRAKTAAYDLLDALPGDNFGIIIFSGDAVLLMPLTHDHNALKETIEQLQ FGWVSQGGTNLENVVRLALQTFKRDKEADAKNALVILSDGEDTVNITYKTAEAARQHQLIIVTAGIGTTIGTTIPDEQSP SGLYRDRRGQHVVSKLNPESLQYLARQTEGQYVQLSDGAALNRFVKDIADRLDTTEGKEEVRRVPNDRYITFAVPALICL LLTLLAGTRWRSFRRSGRRGMTSLTAAALFCAGLLGQEAQADTHALDNVTDLIRTGKTEEAVKSIDEMLAVPDLAEETRQ ALEFAKGCLEQKADNPKEAAEAFSQALLSPKPALQADSHFNLGNLEAAQARKTMTFSRPEGEQQQARLSSIDDQIKEIDA RLAKIPVAKKHVKEAVKRFDDALSAYGSHEGAASNKEEMLRYDKSLDEYRRQLEELKKKLEEEKKKQQDQNKDQNKDQNK DQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNK DQNKDQDKDQDKDQDKDQDKDNAETKEGKRDENEMKNARLPSSPEKDRLPETSGMEKPQPQPEDNKPVPAAAQKESREEK ERREARAILMERRDIEPGCPVPQRSPEIPPDKDY
Sequences:
>Translated_754_residues MTFLYPNVLYALILPVLLAAAAWWLWRRRSRKWEVLVSPEYRRELVHAPATWHRVLPVIFAVLASIFAILSIARPVDGYT EVKEIPKSRNILIAIDCSRSMLSKDASPTRLGRAKTAAYDLLDALPGDNFGIIIFSGDAVLLMPLTHDHNALKETIEQLQ FGWVSQGGTNLENVVRLALQTFKRDKEADAKNALVILSDGEDTVNITYKTAEAARQHQLIIVTAGIGTTIGTTIPDEQSP SGLYRDRRGQHVVSKLNPESLQYLARQTEGQYVQLSDGAALNRFVKDIADRLDTTEGKEEVRRVPNDRYITFAVPALICL LLTLLAGTRWRSFRRSGRRGMTSLTAAALFCAGLLGQEAQADTHALDNVTDLIRTGKTEEAVKSIDEMLAVPDLAEETRQ ALEFAKGCLEQKADNPKEAAEAFSQALLSPKPALQADSHFNLGNLEAAQARKTMTFSRPEGEQQQARLSSIDDQIKEIDA RLAKIPVAKKHVKEAVKRFDDALSAYGSHEGAASNKEEMLRYDKSLDEYRRQLEELKKKLEEEKKKQQDQNKDQNKDQNK DQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNK DQNKDQDKDQDKDQDKDQDKDNAETKEGKRDENEMKNARLPSSPEKDRLPETSGMEKPQPQPEDNKPVPAAAQKESREEK ERREARAILMERRDIEPGCPVPQRSPEIPPDKDY >Mature_753_residues TFLYPNVLYALILPVLLAAAAWWLWRRRSRKWEVLVSPEYRRELVHAPATWHRVLPVIFAVLASIFAILSIARPVDGYTE VKEIPKSRNILIAIDCSRSMLSKDASPTRLGRAKTAAYDLLDALPGDNFGIIIFSGDAVLLMPLTHDHNALKETIEQLQF GWVSQGGTNLENVVRLALQTFKRDKEADAKNALVILSDGEDTVNITYKTAEAARQHQLIIVTAGIGTTIGTTIPDEQSPS GLYRDRRGQHVVSKLNPESLQYLARQTEGQYVQLSDGAALNRFVKDIADRLDTTEGKEEVRRVPNDRYITFAVPALICLL LTLLAGTRWRSFRRSGRRGMTSLTAAALFCAGLLGQEAQADTHALDNVTDLIRTGKTEEAVKSIDEMLAVPDLAEETRQA LEFAKGCLEQKADNPKEAAEAFSQALLSPKPALQADSHFNLGNLEAAQARKTMTFSRPEGEQQQARLSSIDDQIKEIDAR LAKIPVAKKHVKEAVKRFDDALSAYGSHEGAASNKEEMLRYDKSLDEYRRQLEELKKKLEEEKKKQQDQNKDQNKDQNKD QNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKD QNKDQDKDQDKDQDKDQDKDNAETKEGKRDENEMKNARLPSSPEKDRLPETSGMEKPQPQPEDNKPVPAAAQKESREEKE RREARAILMERRDIEPGCPVPQRSPEIPPDKDY
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022933 - InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 85514; Mature: 85383
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLYPNVLYALILPVLLAAAAWWLWRRRSRKWEVLVSPEYRRELVHAPATWHRVLPVIF CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHH AVLASIFAILSIARPVDGYTEVKEIPKSRNILIAIDCSRSMLSKDASPTRLGRAKTAAYD HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEECCHHHHHCCCCCHHHHHHHHHHHH LLDALPGDNFGIIIFSGDAVLLMPLTHDHNALKETIEQLQFGWVSQGGTNLENVVRLALQ HHHHCCCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH TFKRDKEADAKNALVILSDGEDTVNITYKTAEAARQHQLIIVTAGIGTTIGTTIPDEQSP HHHHHHCCCCCCEEEEEECCCCEEEEEEECHHHHHCCCEEEEECCCCCHHCCCCCCCCCC SGLYRDRRGQHVVSKLNPESLQYLARQTEGQYVQLSDGAALNRFVKDIADRLDTTEGKEE CCHHHHHCHHHHHHHCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCHHH VRRVPNDRYITFAVPALICLLLTLLAGTRWRSFRRSGRRGMTSLTAAALFCAGLLGQEAQ HHHCCCCCEEHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHH ADTHALDNVTDLIRTGKTEEAVKSIDEMLAVPDLAEETRQALEFAKGCLEQKADNPKEAA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH EAFSQALLSPKPALQADSHFNLGNLEAAQARKTMTFSRPEGEQQQARLSSIDDQIKEIDA HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH RLAKIPVAKKHVKEAVKRFDDALSAYGSHEGAASNKEEMLRYDKSLDEYRRQLEELKKKL HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EEEKKKQQDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNK HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQDKDQDKDQDKDQDK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DNAETKEGKRDENEMKNARLPSSPEKDRLPETSGMEKPQPQPEDNKPVPAAAQKESREEK CCCHHHCCCCCHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH ERREARAILMERRDIEPGCPVPQRSPEIPPDKDY HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TFLYPNVLYALILPVLLAAAAWWLWRRRSRKWEVLVSPEYRRELVHAPATWHRVLPVIF CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHH AVLASIFAILSIARPVDGYTEVKEIPKSRNILIAIDCSRSMLSKDASPTRLGRAKTAAYD HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEECCHHHHHCCCCCHHHHHHHHHHHH LLDALPGDNFGIIIFSGDAVLLMPLTHDHNALKETIEQLQFGWVSQGGTNLENVVRLALQ HHHHCCCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH TFKRDKEADAKNALVILSDGEDTVNITYKTAEAARQHQLIIVTAGIGTTIGTTIPDEQSP HHHHHHCCCCCCEEEEEECCCCEEEEEEECHHHHHCCCEEEEECCCCCHHCCCCCCCCCC SGLYRDRRGQHVVSKLNPESLQYLARQTEGQYVQLSDGAALNRFVKDIADRLDTTEGKEE CCHHHHHCHHHHHHHCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCHHH VRRVPNDRYITFAVPALICLLLTLLAGTRWRSFRRSGRRGMTSLTAAALFCAGLLGQEAQ HHHCCCCCEEHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHH ADTHALDNVTDLIRTGKTEEAVKSIDEMLAVPDLAEETRQALEFAKGCLEQKADNPKEAA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH EAFSQALLSPKPALQADSHFNLGNLEAAQARKTMTFSRPEGEQQQARLSSIDDQIKEIDA HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH RLAKIPVAKKHVKEAVKRFDDALSAYGSHEGAASNKEEMLRYDKSLDEYRRQLEELKKKL HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EEEKKKQQDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNK HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQNKDQDKDQDKDQDKDQDK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DNAETKEGKRDENEMKNARLPSSPEKDRLPETSGMEKPQPQPEDNKPVPAAAQKESREEK CCCHHHCCCCCHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH ERREARAILMERRDIEPGCPVPQRSPEIPPDKDY HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA