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The map label for this gene is ydcF [C]

Identifier: 187736260

GI number: 187736260

Start: 2158076

End: 2158738

Strand: Direct

Name: ydcF [C]

Synonym: Amuc_1773

Alternate gene names: 187736260

Gene position: 2158076-2158738 (Clockwise)

Preceding gene: 187736259

Following gene: 187736261

Centisome position: 81.01

GC content: 55.51

Gene sequence:

>663_bases
ATGACTCCAGAGGAAGCCATAGCAATTTTATGGGATTACCATCACGTGAAGCAGGAACTGCGTCCGGCGGAACTCATATT
CATTCTTGGTAGCAATGACATAAGGGTGGCGGAATATGCGGCGGAACTTTATGCCCGGAAGCTGGCTCCCCTGTTGCTGT
TTTCCGGCGGAATGGGGCGTTTTACAGGGGAATGGGCCGTACCGGAAGCGGAACTTTTCGCAGAGGCGGCTATGAAAAAG
GGAGTGCCGGGAGACTGCATTCTCATTGAAAACAAATCCACCAATACGGGAGAAAATGTCCGCTTTTCCCGTGCTGTCCT
GGAAAAAGCCGGCATCCCGGAACCATCCAGCATCATCGCCCTTCAAAAGCCCTATATGGAACGGCGCACGCTGGCTACGC
TCCAGGCCCAGTGGCCGGAAGTACGGGTGGCGGTCAGCTCCCCTCCTTTCTCGTTCAGGGAATATCTGACCAGGGAGCTC
CCGCAGGATCTGGTTGTTTCCGCCATGGTGGGGGACTTTCAAAGGATACTGGAATATCCTAAACAGGGATTTTCCACGGA
ACAGCCTGTGCCTCCGGAGGCGATGGCGGCATTCCGCACGCTGGTGGAAGCGGGGTATGGCTCCCAGCTGCTCAAGGGTG
TCCCCCTTCCTTGGAATTCTTGA

Upstream 100 bases:

>100_bases
GCGAATGCGTTGCTGGGATGGGCCGCTCTGGAATGGGGTAAATACGGATTATGGTGAATCCGGCGTTTACAGAGAGGATT
TTCTTAAGTACATAAAGCCG

Downstream 100 bases:

>100_bases
GAAGACACGCTTTTTGCTTTTACTGAATGCTGATTGCGGGCATCAATACAACCCGCATAGCCAACCCAATTATATAACTT
ATCATGGCAGACAGAACCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTPEEAIAILWDYHHVKQELRPAELIFILGSNDIRVAEYAAELYARKLAPLLLFSGGMGRFTGEWAVPEAELFAEAAMKK
GVPGDCILIENKSTNTGENVRFSRAVLEKAGIPEPSSIIALQKPYMERRTLATLQAQWPEVRVAVSSPPFSFREYLTREL
PQDLVVSAMVGDFQRILEYPKQGFSTEQPVPPEAMAAFRTLVEAGYGSQLLKGVPLPWNS

Sequences:

>Translated_220_residues
MTPEEAIAILWDYHHVKQELRPAELIFILGSNDIRVAEYAAELYARKLAPLLLFSGGMGRFTGEWAVPEAELFAEAAMKK
GVPGDCILIENKSTNTGENVRFSRAVLEKAGIPEPSSIIALQKPYMERRTLATLQAQWPEVRVAVSSPPFSFREYLTREL
PQDLVVSAMVGDFQRILEYPKQGFSTEQPVPPEAMAAFRTLVEAGYGSQLLKGVPLPWNS
>Mature_219_residues
TPEEAIAILWDYHHVKQELRPAELIFILGSNDIRVAEYAAELYARKLAPLLLFSGGMGRFTGEWAVPEAELFAEAAMKKG
VPGDCILIENKSTNTGENVRFSRAVLEKAGIPEPSSIIALQKPYMERRTLATLQAQWPEVRVAVSSPPFSFREYLTRELP
QDLVVSAMVGDFQRILEYPKQGFSTEQPVPPEAMAAFRTLVEAGYGSQLLKGVPLPWNS

Specific function: The imp locus inhibits the extrachromosomal maintenance of the streptomyces plasmid SLP1. May function as a transcriptional activator [H]

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydcF [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 24494; Mature: 24363

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPEEAIAILWDYHHVKQELRPAELIFILGSNDIRVAEYAAELYARKLAPLLLFSGGMGR
CCCHHHEEHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
FTGEWAVPEAELFAEAAMKKGVPGDCILIENKSTNTGENVRFSRAVLEKAGIPEPSSIIA
CCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHEEE
LQKPYMERRTLATLQAQWPEVRVAVSSPPFSFREYLTRELPQDLVVSAMVGDFQRILEYP
ECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KQGFSTEQPVPPEAMAAFRTLVEAGYGSQLLKGVPLPWNS
HCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCC
>Mature Secondary Structure 
TPEEAIAILWDYHHVKQELRPAELIFILGSNDIRVAEYAAELYARKLAPLLLFSGGMGR
CCHHHEEHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
FTGEWAVPEAELFAEAAMKKGVPGDCILIENKSTNTGENVRFSRAVLEKAGIPEPSSIIA
CCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHEEE
LQKPYMERRTLATLQAQWPEVRVAVSSPPFSFREYLTRELPQDLVVSAMVGDFQRILEYP
ECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KQGFSTEQPVPPEAMAAFRTLVEAGYGSQLLKGVPLPWNS
HCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2770697; 12000953 [H]