Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736259
Identifier: 187736259
GI number: 187736259
Start: 2157253
End: 2158032
Strand: Direct
Name: 187736259
Synonym: Amuc_1772
Alternate gene names: NA
Gene position: 2157253-2158032 (Clockwise)
Preceding gene: 187736258
Following gene: 187736260
Centisome position: 80.97
GC content: 60.51
Gene sequence:
>780_bases ATGAACTCCGTGACGGAGGCGCTGAAAACAAAGGCGTATGTGGTGCCGTTTGCGGTATTCATGGGCTTTACCCTGGTGTG GCAGTTTGGCGTTCCCTTGCTGGAATGGGACCACCCGGCCGCACCCTGGTGGAGAAGGGCGCCGGAACAATGGCTGTATC CCGTTCAGGCAATCGTTTGCTTTGCCCTGGTTTTCCGGTGGAGAAAGGCCATTGATTGGGATTGGCGGTGGAAACCCGCC GCCTGGGGAATCCTGTTCGGCGTGCTGGGTATCCTGTGCTGGCTGGCCCCGACCATGATAGCGGACCGCCTGCCCGGAGG GGCGGATGCCTGGTTTGGGCATCCCTCCTGGCCCTGGTACCGGTATCTGCTGGGAATTGACGCGCGCCCGGATGGGTTTG AGCCGGGCGTCGTCTTTCTTGCGGGTTCCTGGAGCTGGCTGGGGGCTCTGGTGCTGCGCTTTTTCCGTGCCGTGGTCGTG GTGGCTCTGGTGGAGGAACTTTTCTGGCGCGGCTATCTGATGCGCCTGATGGTGAACCCGGACCATCCCTGGAAGGTGCC GTTCGGCACCCATAGCTGGAAGGCATACTGGGTGACTACCCTCTGTTTCATGGCGGTACACCAGCCTGTGGACTATTGCG GCGCATTCGTTTACGGTTCCCTGGCGTATCTGCTTGCCGTCTGGCGGAAAAACCTGTGCGCTGTGATCATGATGCATGCG GCGGCGAATGCGTTGCTGGGATGGGCCGCTCTGGAATGGGGTAAATACGGATTATGGTGA
Upstream 100 bases:
>100_bases TTCCTGCGCTGTTGCTATGCGACCGCCTTTGACCAGATCAAGGAGGCCTGCAACCGCATGGAACATTTCGTGGAAACTCT TTCCTGACCCGGCAGTGTTC
Downstream 100 bases:
>100_bases ATCCGGCGTTTACAGAGAGGATTTTCTTAAGTACATAAAGCCGATGACTCCAGAGGAAGCCATAGCAATTTTATGGGATT ACCATCACGTGAAGCAGGAA
Product: Abortive infection protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MNSVTEALKTKAYVVPFAVFMGFTLVWQFGVPLLEWDHPAAPWWRRAPEQWLYPVQAIVCFALVFRWRKAIDWDWRWKPA AWGILFGVLGILCWLAPTMIADRLPGGADAWFGHPSWPWYRYLLGIDARPDGFEPGVVFLAGSWSWLGALVLRFFRAVVV VALVEELFWRGYLMRLMVNPDHPWKVPFGTHSWKAYWVTTLCFMAVHQPVDYCGAFVYGSLAYLLAVWRKNLCAVIMMHA AANALLGWAALEWGKYGLW
Sequences:
>Translated_259_residues MNSVTEALKTKAYVVPFAVFMGFTLVWQFGVPLLEWDHPAAPWWRRAPEQWLYPVQAIVCFALVFRWRKAIDWDWRWKPA AWGILFGVLGILCWLAPTMIADRLPGGADAWFGHPSWPWYRYLLGIDARPDGFEPGVVFLAGSWSWLGALVLRFFRAVVV VALVEELFWRGYLMRLMVNPDHPWKVPFGTHSWKAYWVTTLCFMAVHQPVDYCGAFVYGSLAYLLAVWRKNLCAVIMMHA AANALLGWAALEWGKYGLW >Mature_259_residues MNSVTEALKTKAYVVPFAVFMGFTLVWQFGVPLLEWDHPAAPWWRRAPEQWLYPVQAIVCFALVFRWRKAIDWDWRWKPA AWGILFGVLGILCWLAPTMIADRLPGGADAWFGHPSWPWYRYLLGIDARPDGFEPGVVFLAGSWSWLGALVLRFFRAVVV VALVEELFWRGYLMRLMVNPDHPWKVPFGTHSWKAYWVTTLCFMAVHQPVDYCGAFVYGSLAYLLAVWRKNLCAVIMMHA AANALLGWAALEWGKYGLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29887; Mature: 29887
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSVTEALKTKAYVVPFAVFMGFTLVWQFGVPLLEWDHPAAPWWRRAPEQWLYPVQAIVC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHCCCHHHHHHHHHHHH FALVFRWRKAIDWDWRWKPAAWGILFGVLGILCWLAPTMIADRLPGGADAWFGHPSWPWY HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH RYLLGIDARPDGFEPGVVFLAGSWSWLGALVLRFFRAVVVVALVEELFWRGYLMRLMVNP HHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DHPWKVPFGTHSWKAYWVTTLCFMAVHQPVDYCGAFVYGSLAYLLAVWRKNLCAVIMMHA CCCEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AANALLGWAALEWGKYGLW HHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNSVTEALKTKAYVVPFAVFMGFTLVWQFGVPLLEWDHPAAPWWRRAPEQWLYPVQAIVC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHCCCHHHHHHHHHHHH FALVFRWRKAIDWDWRWKPAAWGILFGVLGILCWLAPTMIADRLPGGADAWFGHPSWPWY HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH RYLLGIDARPDGFEPGVVFLAGSWSWLGALVLRFFRAVVVVALVEELFWRGYLMRLMVNP HHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DHPWKVPFGTHSWKAYWVTTLCFMAVHQPVDYCGAFVYGSLAYLLAVWRKNLCAVIMMHA CCCEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AANALLGWAALEWGKYGLW HHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA