Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187736259

Identifier: 187736259

GI number: 187736259

Start: 2157253

End: 2158032

Strand: Direct

Name: 187736259

Synonym: Amuc_1772

Alternate gene names: NA

Gene position: 2157253-2158032 (Clockwise)

Preceding gene: 187736258

Following gene: 187736260

Centisome position: 80.97

GC content: 60.51

Gene sequence:

>780_bases
ATGAACTCCGTGACGGAGGCGCTGAAAACAAAGGCGTATGTGGTGCCGTTTGCGGTATTCATGGGCTTTACCCTGGTGTG
GCAGTTTGGCGTTCCCTTGCTGGAATGGGACCACCCGGCCGCACCCTGGTGGAGAAGGGCGCCGGAACAATGGCTGTATC
CCGTTCAGGCAATCGTTTGCTTTGCCCTGGTTTTCCGGTGGAGAAAGGCCATTGATTGGGATTGGCGGTGGAAACCCGCC
GCCTGGGGAATCCTGTTCGGCGTGCTGGGTATCCTGTGCTGGCTGGCCCCGACCATGATAGCGGACCGCCTGCCCGGAGG
GGCGGATGCCTGGTTTGGGCATCCCTCCTGGCCCTGGTACCGGTATCTGCTGGGAATTGACGCGCGCCCGGATGGGTTTG
AGCCGGGCGTCGTCTTTCTTGCGGGTTCCTGGAGCTGGCTGGGGGCTCTGGTGCTGCGCTTTTTCCGTGCCGTGGTCGTG
GTGGCTCTGGTGGAGGAACTTTTCTGGCGCGGCTATCTGATGCGCCTGATGGTGAACCCGGACCATCCCTGGAAGGTGCC
GTTCGGCACCCATAGCTGGAAGGCATACTGGGTGACTACCCTCTGTTTCATGGCGGTACACCAGCCTGTGGACTATTGCG
GCGCATTCGTTTACGGTTCCCTGGCGTATCTGCTTGCCGTCTGGCGGAAAAACCTGTGCGCTGTGATCATGATGCATGCG
GCGGCGAATGCGTTGCTGGGATGGGCCGCTCTGGAATGGGGTAAATACGGATTATGGTGA

Upstream 100 bases:

>100_bases
TTCCTGCGCTGTTGCTATGCGACCGCCTTTGACCAGATCAAGGAGGCCTGCAACCGCATGGAACATTTCGTGGAAACTCT
TTCCTGACCCGGCAGTGTTC

Downstream 100 bases:

>100_bases
ATCCGGCGTTTACAGAGAGGATTTTCTTAAGTACATAAAGCCGATGACTCCAGAGGAAGCCATAGCAATTTTATGGGATT
ACCATCACGTGAAGCAGGAA

Product: Abortive infection protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MNSVTEALKTKAYVVPFAVFMGFTLVWQFGVPLLEWDHPAAPWWRRAPEQWLYPVQAIVCFALVFRWRKAIDWDWRWKPA
AWGILFGVLGILCWLAPTMIADRLPGGADAWFGHPSWPWYRYLLGIDARPDGFEPGVVFLAGSWSWLGALVLRFFRAVVV
VALVEELFWRGYLMRLMVNPDHPWKVPFGTHSWKAYWVTTLCFMAVHQPVDYCGAFVYGSLAYLLAVWRKNLCAVIMMHA
AANALLGWAALEWGKYGLW

Sequences:

>Translated_259_residues
MNSVTEALKTKAYVVPFAVFMGFTLVWQFGVPLLEWDHPAAPWWRRAPEQWLYPVQAIVCFALVFRWRKAIDWDWRWKPA
AWGILFGVLGILCWLAPTMIADRLPGGADAWFGHPSWPWYRYLLGIDARPDGFEPGVVFLAGSWSWLGALVLRFFRAVVV
VALVEELFWRGYLMRLMVNPDHPWKVPFGTHSWKAYWVTTLCFMAVHQPVDYCGAFVYGSLAYLLAVWRKNLCAVIMMHA
AANALLGWAALEWGKYGLW
>Mature_259_residues
MNSVTEALKTKAYVVPFAVFMGFTLVWQFGVPLLEWDHPAAPWWRRAPEQWLYPVQAIVCFALVFRWRKAIDWDWRWKPA
AWGILFGVLGILCWLAPTMIADRLPGGADAWFGHPSWPWYRYLLGIDARPDGFEPGVVFLAGSWSWLGALVLRFFRAVVV
VALVEELFWRGYLMRLMVNPDHPWKVPFGTHSWKAYWVTTLCFMAVHQPVDYCGAFVYGSLAYLLAVWRKNLCAVIMMHA
AANALLGWAALEWGKYGLW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29887; Mature: 29887

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA