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The map label for this gene is rpe [H]

Identifier: 187736141

GI number: 187736141

Start: 1996583

End: 1997236

Strand: Reverse

Name: rpe [H]

Synonym: Amuc_1653

Alternate gene names: 187736141

Gene position: 1997236-1996583 (Counterclockwise)

Preceding gene: 187736142

Following gene: 187736136

Centisome position: 74.97

GC content: 58.72

Gene sequence:

>654_bases
ATGACCATAATCTCCCCGTCCCTGCTGGCCGCTGATTTCTCCCGCATTGGGGAGGAAGCGCGGCGGGCCTTTGACGCCGG
TGCCGACTGGCTGCATCTGGACATCATGGACGGCCACTTTGTGGACAACATCTCCTTTGGCCCGGAAATCTGCGCCGCCG
TCAGAAAAGCGGTGGGGCCGGACCGCTTTCTGGATGCCCACCTGATGATAGAACGGCCGGACCACTACTTTGACCGCTTC
GTCAGGGCAGGTGTGAACCTCATCTGCTTTCACGTGGAACTGGGAGACTCCTACTACATTCGCAACACACTCGGGCGAAT
CCGGGAAGCCGGAGTAAAAAACGGCCTGGCTCTCAACCCGGCCACACCCTTTGAAGCCGTAGAACCTTACCTGGCGGAAA
TAGACCTGCTGCTGGTCATGTCCGTAGTGCCTGGCTTCGGCGGCCAGTCCTTCATGCCTTCCGTATTGGACAAGGTGGAA
AAAGCCGCCGAATGGCGCACGGAAAACCGCGCCTCCTTCCTCATTCAAATGGACGGAGGAATTGGCCAAAACAATGCCGC
TCAGTGCGCTCTGGCCGGAGCGGATGTGCTGGTGGCAGGCTCCTCTACCTTCAAGGCTCCGGATATGGCCCACGCCATTG
CGGAAATGAAATGA

Upstream 100 bases:

>100_bases
AACCTTCCTGGACGGCGTCACTGTGCGCAAGGTAATTGTCGTACCCGGCCGCCTCGTCAACATTGTAGCCAACTGACATC
CCGAAAAGCCTCCCTCAGCC

Downstream 100 bases:

>100_bases
ACCACTTGGCACTTCGGAAAATCAAAAAATCCGAAAATCCGCCCTGAAACGCCGGAGTCCATCCCCGGTATTCCGTCATC
AGGCTCTAGGGAAGAGCCCT

Product: Ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MTIISPSLLAADFSRIGEEARRAFDAGADWLHLDIMDGHFVDNISFGPEICAAVRKAVGPDRFLDAHLMIERPDHYFDRF
VRAGVNLICFHVELGDSYYIRNTLGRIREAGVKNGLALNPATPFEAVEPYLAEIDLLLVMSVVPGFGGQSFMPSVLDKVE
KAAEWRTENRASFLIQMDGGIGQNNAAQCALAGADVLVAGSSTFKAPDMAHAIAEMK

Sequences:

>Translated_217_residues
MTIISPSLLAADFSRIGEEARRAFDAGADWLHLDIMDGHFVDNISFGPEICAAVRKAVGPDRFLDAHLMIERPDHYFDRF
VRAGVNLICFHVELGDSYYIRNTLGRIREAGVKNGLALNPATPFEAVEPYLAEIDLLLVMSVVPGFGGQSFMPSVLDKVE
KAAEWRTENRASFLIQMDGGIGQNNAAQCALAGADVLVAGSSTFKAPDMAHAIAEMK
>Mature_216_residues
TIISPSLLAADFSRIGEEARRAFDAGADWLHLDIMDGHFVDNISFGPEICAAVRKAVGPDRFLDAHLMIERPDHYFDRFV
RAGVNLICFHVELGDSYYIRNTLGRIREAGVKNGLALNPATPFEAVEPYLAEIDLLLVMSVVPGFGGQSFMPSVLDKVEK
AAEWRTENRASFLIQMDGGIGQNNAAQCALAGADVLVAGSSTFKAPDMAHAIAEMK

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=207, Percent_Identity=41.5458937198068, Blast_Score=172, Evalue=1e-43,
Organism=Homo sapiens, GI219879828, Length=205, Percent_Identity=39.5121951219512, Blast_Score=163, Evalue=1e-40,
Organism=Homo sapiens, GI24307923, Length=162, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=6e-20,
Organism=Escherichia coli, GI1789788, Length=215, Percent_Identity=41.8604651162791, Blast_Score=177, Evalue=6e-46,
Organism=Escherichia coli, GI1790523, Length=200, Percent_Identity=40, Blast_Score=150, Evalue=7e-38,
Organism=Escherichia coli, GI1790754, Length=218, Percent_Identity=36.697247706422, Blast_Score=97, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17552948, Length=217, Percent_Identity=36.8663594470046, Blast_Score=161, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6322341, Length=230, Percent_Identity=39.1304347826087, Blast_Score=164, Evalue=1e-41,
Organism=Drosophila melanogaster, GI24586301, Length=215, Percent_Identity=40, Blast_Score=171, Evalue=3e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23627; Mature: 23496

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIISPSLLAADFSRIGEEARRAFDAGADWLHLDIMDGHFVDNISFGPEICAAVRKAVGP
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEECCCCCCHHHHHHHHHHCCC
DRFLDAHLMIERPDHYFDRFVRAGVNLICFHVELGDSYYIRNTLGRIREAGVKNGLALNP
CHHCCCEEEEECCHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEECC
ATPFEAVEPYLAEIDLLLVMSVVPGFGGQSFMPSVLDKVEKAAEWRTENRASFLIQMDGG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
IGQNNAAQCALAGADVLVAGSSTFKAPDMAHAIAEMK
CCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
TIISPSLLAADFSRIGEEARRAFDAGADWLHLDIMDGHFVDNISFGPEICAAVRKAVGP
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEECCCCCCHHHHHHHHHHCCC
DRFLDAHLMIERPDHYFDRFVRAGVNLICFHVELGDSYYIRNTLGRIREAGVKNGLALNP
CHHCCCEEEEECCHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEECC
ATPFEAVEPYLAEIDLLLVMSVVPGFGGQSFMPSVLDKVEKAAEWRTENRASFLIQMDGG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
IGQNNAAQCALAGADVLVAGSSTFKAPDMAHAIAEMK
CCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]