Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is yqaB [H]
Identifier: 187736137
GI number: 187736137
Start: 1991115
End: 1991723
Strand: Direct
Name: yqaB [H]
Synonym: Amuc_1649
Alternate gene names: 187736137
Gene position: 1991115-1991723 (Clockwise)
Preceding gene: 187736135
Following gene: 187736138
Centisome position: 74.74
GC content: 56.98
Gene sequence:
>609_bases ATGAAGAAACGCGTGGATTTGCCTGAAAAAAAATATGAAGGATATATTTTTGATTTGGACGGCACCCTGGTGGACAGTAT GCCGCTCCATTACAGGGCATGGCGTGAAGCCCTGGCTCGAGCGGGGGCTCCGGACCATGTGTTCCGGGCGGATGAATTTT ATTCCTGCGGCGGAAAATCCGCCAATGATGTGGTGCGTTTTTTAAATGAACGGTACGGCATGCACATGGATGCGGCGTCC ACAGCTGCGGACAAGCGCCGCATTTATTTGGAAATGCTGGAAAAGGAAGGCATGCAGCCTATCCGGGAAGTGGTGGAATT CGTGCATTCCCTGGGAGACGCCCCCAAGGCGATAGCTACCGGGAGCGCCATGCCGGGAGCGTCCCGGACTCTGGCTGCTG CCGGACTTTCAGGCCTTTTTGATGTGATTTTGACGCCGGATGAGGTGGAGCATGGCAAACCTGCTCCGGACATGTTTTTG AAGGCGGCGGAACTCCTGGGGGCATCCCCGGACCGTTGCGTGGTTTTTGAGGATGCCGAACCCGGCATGAAAGCTGCCGC GGCCGCAGGAATGGACTGCGTACAGGTCCGGCGGCCATCCCTGTCCTGA
Upstream 100 bases:
>100_bases ATGTCAAGCTCTTGATGTATTTTTTAAGGCATTCCTTTCCTGCACGGACTGACTGTGGGCTTTACCGGAAAAGGAGTTTG TGGCACTATATTCTCCCGTT
Downstream 100 bases:
>100_bases TTCCTCTTTCCGGATTTGGTACGGAAGGGGATTCCGGGATTTTCCTCCTTTCTCCATGCCCTTCTTCCTTTTAAGGAAAA GGCTTCACATTGCGCCCGGA
Product: beta-phosphoglucomutase family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKKRVDLPEKKYEGYIFDLDGTLVDSMPLHYRAWREALARAGAPDHVFRADEFYSCGGKSANDVVRFLNERYGMHMDAAS TAADKRRIYLEMLEKEGMQPIREVVEFVHSLGDAPKAIATGSAMPGASRTLAAAGLSGLFDVILTPDEVEHGKPAPDMFL KAAELLGASPDRCVVFEDAEPGMKAAAAAGMDCVQVRRPSLS
Sequences:
>Translated_202_residues MKKRVDLPEKKYEGYIFDLDGTLVDSMPLHYRAWREALARAGAPDHVFRADEFYSCGGKSANDVVRFLNERYGMHMDAAS TAADKRRIYLEMLEKEGMQPIREVVEFVHSLGDAPKAIATGSAMPGASRTLAAAGLSGLFDVILTPDEVEHGKPAPDMFL KAAELLGASPDRCVVFEDAEPGMKAAAAAGMDCVQVRRPSLS >Mature_202_residues MKKRVDLPEKKYEGYIFDLDGTLVDSMPLHYRAWREALARAGAPDHVFRADEFYSCGGKSANDVVRFLNERYGMHMDAAS TAADKRRIYLEMLEKEGMQPIREVVEFVHSLGDAPKAIATGSAMPGASRTLAAAGLSGLFDVILTPDEVEHGKPAPDMFL KAAELLGASPDRCVVFEDAEPGMKAAAAAGMDCVQVRRPSLS
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates fructose 1-phosphate and 6-phosphogluconate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=200, Percent_Identity=29.5, Blast_Score=68, Evalue=7e-12, Organism=Escherichia coli, GI1789046, Length=192, Percent_Identity=38.0208333333333, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI87082080, Length=194, Percent_Identity=35.0515463917526, Blast_Score=85, Evalue=3e-18, Organism=Escherichia coli, GI1787576, Length=193, Percent_Identity=28.4974093264249, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1788021, Length=193, Percent_Identity=27.4611398963731, Blast_Score=62, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17554716, Length=201, Percent_Identity=31.8407960199005, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI17137324, Length=200, Percent_Identity=31.5, Blast_Score=67, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010976 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 22007; Mature: 22007
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRVDLPEKKYEGYIFDLDGTLVDSMPLHYRAWREALARAGAPDHVFRADEFYSCGGKS CCCCCCCCHHHHCCEEEECCCCCHHCCCHHHHHHHHHHHHCCCCCHHCCCHHHHHCCCCC ANDVVRFLNERYGMHMDAASTAADKRRIYLEMLEKEGMQPIREVVEFVHSLGDAPKAIAT HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHC GSAMPGASRTLAAAGLSGLFDVILTPDEVEHGKPAPDMFLKAAELLGASPDRCVVFEDAE CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCC PGMKAAAAAGMDCVQVRRPSLS CCHHHHHHCCCHHHHHCCCCCC >Mature Secondary Structure MKKRVDLPEKKYEGYIFDLDGTLVDSMPLHYRAWREALARAGAPDHVFRADEFYSCGGKS CCCCCCCCHHHHCCEEEECCCCCHHCCCHHHHHHHHHHHHCCCCCHHCCCHHHHHCCCCC ANDVVRFLNERYGMHMDAASTAADKRRIYLEMLEKEGMQPIREVVEFVHSLGDAPKAIAT HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHC GSAMPGASRTLAAAGLSGLFDVILTPDEVEHGKPAPDMFLKAAELLGASPDRCVVFEDAE CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCC PGMKAAAAAGMDCVQVRRPSLS CCHHHHHHCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]