Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is yegS [C]
Identifier: 187736132
GI number: 187736132
Start: 1985918
End: 1986775
Strand: Reverse
Name: yegS [C]
Synonym: Amuc_1643
Alternate gene names: 187736132
Gene position: 1986775-1985918 (Counterclockwise)
Preceding gene: 187736133
Following gene: 187736120
Centisome position: 74.58
GC content: 56.76
Gene sequence:
>858_bases ATGAAAATTCCCCTGTTTTTCAATAACACGGCGCGCAGCGCCAGATCCGGACGATTCCGCCGCTGGCTGGATCGGCACCG GGATTTTTTTGACGTCATTGAACCGGAAAGCAGGGAAGACATGTTGAACCATTTGGTTTCTCAGGCTAATTCCGGAGCGC CTGCCGTGGCTGTGGCTGGGGGAGACGGCACGCTGGGAATCGCGGCAAGGGCCCTCTGCAATACGGAAACGGTGCTGGCC CCCTTCCCTGCGGGTACCATGAATGTTTTTTCACGGGAAATAGGAATCCGCCCGGATTTCGACCACGCCCTGCACATTCT GAACACGGGGCGTTCCAAAAATGTGGACCTGTTCGCATTCAACGGGCAAGTTTTTCTCCAAATGGCGGGCATTGGCGCGG ATGCCCGAGCCGTAGAACTGACCACATGGGAAATGAAAAAAAAATGGAAAGCCCTTGCCTACGTAATTGCCGGCGCCCGC GTCTGTACGGAAAAACAGCCGCACCTCACCCTGACCACAGATGAAGGCCGGGTATTGGAAGGCCGCTTCATCATCTTCGG CAATGGACGCAAGTATGGCGGGCCGCTTAACTTCTTTGCTGAAGCGGACAACAGTGACGGCCTTCTGGACGCAGTAGTAT TCAGGCATTCCATTACTTCCATCATCGGGGAATTCCTGATGGCCGCAGTCCATGGGGGCTTTCATTCCCGGAGGAGCGGC AGTTTTGAATACATCCGGATGACGGGGGGATCCGTCACCTCCGCCGGACAGGCCTCCTGCGAACTGGACGGCGATTATGC AGGAAACGCTCCGGTCCGCATTACCCGCCCCGGCTCGCTGAAAGTGTTCGTCCCCTGA
Upstream 100 bases:
>100_bases GCATGCTGGAGTTCAAGCTGCCTGACGGAACCGTGCGCCATGAACCTGTGGCACACACGGAGGCCCCGGTTCAGATTTTG AACTTCTTCGTGTCCGCTCC
Downstream 100 bases:
>100_bases AACGCAGCGGGGAAACAGGCCTTTCCGACAGAAGCCAGGAAGCCCCCAGCCCCCCTTACCTTCTCCATGAAACCGTAAAC AAGCCGTACCGGAAAAACCG
Product: diacylglycerol kinase catalytic region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MKIPLFFNNTARSARSGRFRRWLDRHRDFFDVIEPESREDMLNHLVSQANSGAPAVAVAGGDGTLGIAARALCNTETVLA PFPAGTMNVFSREIGIRPDFDHALHILNTGRSKNVDLFAFNGQVFLQMAGIGADARAVELTTWEMKKKWKALAYVIAGAR VCTEKQPHLTLTTDEGRVLEGRFIIFGNGRKYGGPLNFFAEADNSDGLLDAVVFRHSITSIIGEFLMAAVHGGFHSRRSG SFEYIRMTGGSVTSAGQASCELDGDYAGNAPVRITRPGSLKVFVP
Sequences:
>Translated_285_residues MKIPLFFNNTARSARSGRFRRWLDRHRDFFDVIEPESREDMLNHLVSQANSGAPAVAVAGGDGTLGIAARALCNTETVLA PFPAGTMNVFSREIGIRPDFDHALHILNTGRSKNVDLFAFNGQVFLQMAGIGADARAVELTTWEMKKKWKALAYVIAGAR VCTEKQPHLTLTTDEGRVLEGRFIIFGNGRKYGGPLNFFAEADNSDGLLDAVVFRHSITSIIGEFLMAAVHGGFHSRRSG SFEYIRMTGGSVTSAGQASCELDGDYAGNAPVRITRPGSLKVFVP >Mature_285_residues MKIPLFFNNTARSARSGRFRRWLDRHRDFFDVIEPESREDMLNHLVSQANSGAPAVAVAGGDGTLGIAARALCNTETVLA PFPAGTMNVFSREIGIRPDFDHALHILNTGRSKNVDLFAFNGQVFLQMAGIGADARAVELTTWEMKKKWKALAYVIAGAR VCTEKQPHLTLTTDEGRVLEGRFIIFGNGRKYGGPLNFFAEADNSDGLLDAVVFRHSITSIIGEFLMAAVHGGFHSRRSG SFEYIRMTGGSVTSAGQASCELDGDYAGNAPVRITRPGSLKVFVP
Specific function: Unknown
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
Organism=Escherichia coli, GI1788402, Length=170, Percent_Identity=30, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001206 - InterPro: IPR004363 - InterPro: IPR018148 - InterPro: IPR011607 [H]
Pfam domain/function: PF00781 DAGK_cat; PF02142 MGS [H]
EC number: NA
Molecular weight: Translated: 31054; Mature: 31054
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIPLFFNNTARSARSGRFRRWLDRHRDFFDVIEPESREDMLNHLVSQANSGAPAVAVAG CEEEEEECCCCCHHHCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEC GDGTLGIAARALCNTETVLAPFPAGTMNVFSREIGIRPDFDHALHILNTGRSKNVDLFAF CCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHHEEECCCCCCEEEEEE NGQVFLQMAGIGADARAVELTTWEMKKKWKALAYVIAGARVCTEKQPHLTLTTDEGRVLE CCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEECCCCEEEE GRFIIFGNGRKYGGPLNFFAEADNSDGLLDAVVFRHSITSIIGEFLMAAVHGGFHSRRSG EEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SFEYIRMTGGSVTSAGQASCELDGDYAGNAPVRITRPGSLKVFVP CEEEEEEECCCCCCCCCCEEEECCCCCCCCCEEEECCCCEEEEEC >Mature Secondary Structure MKIPLFFNNTARSARSGRFRRWLDRHRDFFDVIEPESREDMLNHLVSQANSGAPAVAVAG CEEEEEECCCCCHHHCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEC GDGTLGIAARALCNTETVLAPFPAGTMNVFSREIGIRPDFDHALHILNTGRSKNVDLFAF CCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHHEEECCCCCCEEEEEE NGQVFLQMAGIGADARAVELTTWEMKKKWKALAYVIAGARVCTEKQPHLTLTTDEGRVLE CCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEECCCCEEEE GRFIIFGNGRKYGGPLNFFAEADNSDGLLDAVVFRHSITSIIGEFLMAAVHGGFHSRRSG EEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SFEYIRMTGGSVTSAGQASCELDGDYAGNAPVRITRPGSLKVFVP CEEEEEEECCCCCCCCCCEEEECCCCCCCCCEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]