Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736124
Identifier: 187736124
GI number: 187736124
Start: 1974549
End: 1975847
Strand: Direct
Name: 187736124
Synonym: Amuc_1635
Alternate gene names: NA
Gene position: 1974549-1975847 (Clockwise)
Preceding gene: 187736123
Following gene: 187736125
Centisome position: 74.12
GC content: 56.35
Gene sequence:
>1299_bases ATGAAGAGAGCGTTTTGCGTGATAGCCGGTGCATGCAGCCTGCTTGGATGGGCTCCGGCGGACGAGACGGGCATGAACAA TGTGCTGGAGGATTGGCGGATGAGGCAGTCCGACTGGGAATCCGCATTGAAAACGGCTGAAAGCGGGGAAAAAAGGGCGG AATTGATGAAGAACCGTCCGGATGCCGTTCCGGTGGCTCGGGAATTATGGAGGCTGGTAGGGCGCGACCTTCAGAAGCCC GAGACTCAAAAATCCTGCCTTCTTCCGGCTGTCGTCTGGTTTCTGGATCATCCCCAGGCTGTAGCGCAGGCGTTCCCCAA TGGAGACATGGCCAGGAAAATTGTCGTGTTCTGCCTGGATTCCCTGGAAAATACGCTGTTCCGGGAACAGGGGGCAGGAA AGGCGGCGTATGCCCTGAGCAATTCCCGTGACCTGCGCTGCCGCGTTATTCTGGAACAGATCAAGGATTACAACCAGTTC CCTGAGGACCAGGGCCTGGCTTCCCTGGGCCTGGCCATGGTGATGAAGGAAACGACAGGGATGCTTCAGGATGACGTCAG GCTGGTGGCGGCCCGCGGAAAATTGCTGAAAGACGCCATTATCAAATGCTATGATTCCAGTTTCGGCCCTATTCCGGTTC AAAATATTGTGAAGGAGGAACTGTATGAAATACGCAATCTCAATATTGGGCAGACCGGGCCTGAAATCAGCCTTCCCTCT ACCGCGGCGTCCGGAAAAGTGACGCTCCCCTCCGGGAATAAGCCCGTGCTGGTGGTTTTTTGGGATCCGCAGGATATGCG TTCCGTTCAGTTTTTGCAAAAAGCCGCGTCTCTCCGGAAAGAATTTCCCGGTTTGACGGTGATGCCGGTGGCTCCCGGAA AGAGAGAGAACATAGAAAAGGCCCTGTTGAACTTGAAAATGGATATGCCCTCCCTGGTGGATGAAAAAGCGGCGGCGTTT AAGGATTACCGGGTGAGGCTCACCCCGCGGGTGTATCTGCTGGACCCTGCGGGGAAAATCCTGATGCGCGGCACGCCGGA TATGCTGTTTGACGCCAACCTGTACGCGGTCATGGGCAAACTTGAGGGAAAAAAGAAAGAAAAGCCGGATGGGAAAAAGT CTCCCTCCTCCCCTGCTTCCTCCAAGCCTGTTTCTCCGCCGGCCAGGATTAATTCCCCGGATACGCGCGTTCCCTCTGTT TCCCGGCCTGATAGGCCGCGGCCCGCGTTCCCTTCCGCCCCCTCCGGTGCGGAGGACCATTCTCTTTCCGCTCCTCCTTT GAGGCCCATGCCTGAATGA
Upstream 100 bases:
>100_bases GCTGTAAACAGCTGGAAGGGAGGGGAAAAGAAAAAATAGGCTGCGTTTTGCCACGGGGTTTGATTGACGTGTGGGACGCG TCAGGGCATAGTGGCAGGGT
Downstream 100 bases:
>100_bases TCCGTTTCATGGAGGGGATTCTGTTGAGAAAGGCCGCGGAGGACGTGGCCCGGGTTCTTTCCGGAGCAGGACACACCGTA TATTTTGTGGGCGGCTGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MKRAFCVIAGACSLLGWAPADETGMNNVLEDWRMRQSDWESALKTAESGEKRAELMKNRPDAVPVARELWRLVGRDLQKP ETQKSCLLPAVVWFLDHPQAVAQAFPNGDMARKIVVFCLDSLENTLFREQGAGKAAYALSNSRDLRCRVILEQIKDYNQF PEDQGLASLGLAMVMKETTGMLQDDVRLVAARGKLLKDAIIKCYDSSFGPIPVQNIVKEELYEIRNLNIGQTGPEISLPS TAASGKVTLPSGNKPVLVVFWDPQDMRSVQFLQKAASLRKEFPGLTVMPVAPGKRENIEKALLNLKMDMPSLVDEKAAAF KDYRVRLTPRVYLLDPAGKILMRGTPDMLFDANLYAVMGKLEGKKKEKPDGKKSPSSPASSKPVSPPARINSPDTRVPSV SRPDRPRPAFPSAPSGAEDHSLSAPPLRPMPE
Sequences:
>Translated_432_residues MKRAFCVIAGACSLLGWAPADETGMNNVLEDWRMRQSDWESALKTAESGEKRAELMKNRPDAVPVARELWRLVGRDLQKP ETQKSCLLPAVVWFLDHPQAVAQAFPNGDMARKIVVFCLDSLENTLFREQGAGKAAYALSNSRDLRCRVILEQIKDYNQF PEDQGLASLGLAMVMKETTGMLQDDVRLVAARGKLLKDAIIKCYDSSFGPIPVQNIVKEELYEIRNLNIGQTGPEISLPS TAASGKVTLPSGNKPVLVVFWDPQDMRSVQFLQKAASLRKEFPGLTVMPVAPGKRENIEKALLNLKMDMPSLVDEKAAAF KDYRVRLTPRVYLLDPAGKILMRGTPDMLFDANLYAVMGKLEGKKKEKPDGKKSPSSPASSKPVSPPARINSPDTRVPSV SRPDRPRPAFPSAPSGAEDHSLSAPPLRPMPE >Mature_432_residues MKRAFCVIAGACSLLGWAPADETGMNNVLEDWRMRQSDWESALKTAESGEKRAELMKNRPDAVPVARELWRLVGRDLQKP ETQKSCLLPAVVWFLDHPQAVAQAFPNGDMARKIVVFCLDSLENTLFREQGAGKAAYALSNSRDLRCRVILEQIKDYNQF PEDQGLASLGLAMVMKETTGMLQDDVRLVAARGKLLKDAIIKCYDSSFGPIPVQNIVKEELYEIRNLNIGQTGPEISLPS TAASGKVTLPSGNKPVLVVFWDPQDMRSVQFLQKAASLRKEFPGLTVMPVAPGKRENIEKALLNLKMDMPSLVDEKAAAF KDYRVRLTPRVYLLDPAGKILMRGTPDMLFDANLYAVMGKLEGKKKEKPDGKKSPSSPASSKPVSPPARINSPDTRVPSV SRPDRPRPAFPSAPSGAEDHSLSAPPLRPMPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47647; Mature: 47647
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRAFCVIAGACSLLGWAPADETGMNNVLEDWRMRQSDWESALKTAESGEKRAELMKNRP CCCEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC DAVPVARELWRLVGRDLQKPETQKSCLLPAVVWFLDHPQAVAQAFPNGDMARKIVVFCLD CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHH SLENTLFREQGAGKAAYALSNSRDLRCRVILEQIKDYNQFPEDQGLASLGLAMVMKETTG HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH MLQDDVRLVAARGKLLKDAIIKCYDSSFGPIPVQNIVKEELYEIRNLNIGQTGPEISLPS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC TAASGKVTLPSGNKPVLVVFWDPQDMRSVQFLQKAASLRKEFPGLTVMPVAPGKRENIEK CCCCCEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH ALLNLKMDMPSLVDEKAAAFKDYRVRLTPRVYLLDPAGKILMRGTPDMLFDANLYAVMGK HHHHHCCCCHHHHHHHHHHHHCCEEEECCEEEEECCCCCEEECCCCCCEECCHHHHHHHH LEGKKKEKPDGKKSPSSPASSKPVSPPARINSPDTRVPSVSRPDRPRPAFPSAPSGAEDH HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SLSAPPLRPMPE CCCCCCCCCCCC >Mature Secondary Structure MKRAFCVIAGACSLLGWAPADETGMNNVLEDWRMRQSDWESALKTAESGEKRAELMKNRP CCCEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC DAVPVARELWRLVGRDLQKPETQKSCLLPAVVWFLDHPQAVAQAFPNGDMARKIVVFCLD CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHH SLENTLFREQGAGKAAYALSNSRDLRCRVILEQIKDYNQFPEDQGLASLGLAMVMKETTG HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH MLQDDVRLVAARGKLLKDAIIKCYDSSFGPIPVQNIVKEELYEIRNLNIGQTGPEISLPS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC TAASGKVTLPSGNKPVLVVFWDPQDMRSVQFLQKAASLRKEFPGLTVMPVAPGKRENIEK CCCCCEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH ALLNLKMDMPSLVDEKAAAFKDYRVRLTPRVYLLDPAGKILMRGTPDMLFDANLYAVMGK HHHHHCCCCHHHHHHHHHHHHCCEEEECCEEEEECCCCCEEECCCCCCEECCHHHHHHHH LEGKKKEKPDGKKSPSSPASSKPVSPPARINSPDTRVPSVSRPDRPRPAFPSAPSGAEDH HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SLSAPPLRPMPE CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA