Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is cdsA [H]
Identifier: 187736121
GI number: 187736121
Start: 1968148
End: 1969068
Strand: Direct
Name: cdsA [H]
Synonym: Amuc_1632
Alternate gene names: 187736121
Gene position: 1968148-1969068 (Clockwise)
Preceding gene: 187736118
Following gene: 187736122
Centisome position: 73.88
GC content: 55.7
Gene sequence:
>921_bases ATGGGTGTTCTGCTGCAGCGTTCATTCAGCACCGTGGTTTTGCTTGGGTTGCTGGCCGGGGCTTTGTGGTGGGACTGCGA ACTTGGGTATTACGGTCTGGTCTGCATTTTCTGTATTTTGGCCGCCTGGGAATGGCGGCACATGCTGCTGCGTTCCGGAA AAGCCTCCCAGCCGAACTTGAGCTTTCTTTTCGGAGTGGCGTACCCCGTATTGCTGTCCTGGTCATGCTGCATCACTAAA TTCCGGGAAAGCGCCCTTGCGGAACAGGTTTCTTTCCTCATCCCCCTTCCTCTTCTGGTGGCACTTGCCGCTCCGGTCCT CCTGGTAGTGGTTGCCTTCATCCGTGAGATGAAGCACCCGGTGGATGGAAGCAGGGCTCTCCGTTCCGTGGGTACTACGC TGCTTTCCTTTATTTATCCCGTCTGGCTGTTCTCTTTTGCCATTCTGGCCCTGCATCTGGCGTATATGAGGGCGGGGTAT GTTTATCCGGCCATTGTCATGTGTGTGCTGTGGGTCGTTCTGGTAACGAAGATGGCGGACATTTTTGCCTACGTGAGCGG GTTCCTGCTGGGCGGCCGCCTTTTTTCCCGCAGGCTCATTCCCCACATCAGCCCCAAGAAAACGTGGGAGGGCCTCCTCG GTTCCTGGGTGCTGACGAATGCGGCGGCCATAGGGCTGGTTTTCCCGATGTTCAGAATTTCCGTCTTGTCCATAACCCAG GTACTGGTACTGATGGGATGCACATCCCTCATTTTCCTGCTTTCCGTTTACGGGGATCTGGCCGGGTCCCTGGTTAAACG CAGCCTGGCCATCAAGGATTCCGGTTCCCTGCTGCCGGGGATAGGAGGAATTTTTGATTTGATTGACAGCCCTTCCTTTA CCGTGCCGTTTTTCTGGTTTCTGCTGGCCTGCATCGGCTGA
Upstream 100 bases:
>100_bases GGAAAGGAAGCATTTCAGGATTGAGGTTGCAACGGTTTTCTGTACACTTCGCGTGATGATGAGCATACCGAATCGGGACA AGAGTTTTTCCGGAAGCAAG
Downstream 100 bases:
>100_bases ATGTCCCCGGCACGAACGGATTCCCTGTAACCCGGTATGGTTTTTTCTTCTCTTCCCATTGAGGAAATCCGCGGAGAATT GATGGAGGCTCTGCGGGTTC
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MGVLLQRSFSTVVLLGLLAGALWWDCELGYYGLVCIFCILAAWEWRHMLLRSGKASQPNLSFLFGVAYPVLLSWSCCITK FRESALAEQVSFLIPLPLLVALAAPVLLVVVAFIREMKHPVDGSRALRSVGTTLLSFIYPVWLFSFAILALHLAYMRAGY VYPAIVMCVLWVVLVTKMADIFAYVSGFLLGGRLFSRRLIPHISPKKTWEGLLGSWVLTNAAAIGLVFPMFRISVLSITQ VLVLMGCTSLIFLLSVYGDLAGSLVKRSLAIKDSGSLLPGIGGIFDLIDSPSFTVPFFWFLLACIG
Sequences:
>Translated_306_residues MGVLLQRSFSTVVLLGLLAGALWWDCELGYYGLVCIFCILAAWEWRHMLLRSGKASQPNLSFLFGVAYPVLLSWSCCITK FRESALAEQVSFLIPLPLLVALAAPVLLVVVAFIREMKHPVDGSRALRSVGTTLLSFIYPVWLFSFAILALHLAYMRAGY VYPAIVMCVLWVVLVTKMADIFAYVSGFLLGGRLFSRRLIPHISPKKTWEGLLGSWVLTNAAAIGLVFPMFRISVLSITQ VLVLMGCTSLIFLLSVYGDLAGSLVKRSLAIKDSGSLLPGIGGIFDLIDSPSFTVPFFWFLLACIG >Mature_305_residues GVLLQRSFSTVVLLGLLAGALWWDCELGYYGLVCIFCILAAWEWRHMLLRSGKASQPNLSFLFGVAYPVLLSWSCCITKF RESALAEQVSFLIPLPLLVALAAPVLLVVVAFIREMKHPVDGSRALRSVGTTLLSFIYPVWLFSFAILALHLAYMRAGYV YPAIVMCVLWVVLVTKMADIFAYVSGFLLGGRLFSRRLIPHISPKKTWEGLLGSWVLTNAAAIGLVFPMFRISVLSITQV LVLMGCTSLIFLLSVYGDLAGSLVKRSLAIKDSGSLLPGIGGIFDLIDSPSFTVPFFWFLLACIG
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=299, Percent_Identity=31.438127090301, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1787677, Length=130, Percent_Identity=39.2307692307692, Blast_Score=71, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 33640; Mature: 33509
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVLLQRSFSTVVLLGLLAGALWWDCELGYYGLVCIFCILAAWEWRHMLLRSGKASQPNL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH SFLFGVAYPVLLSWSCCITKFRESALAEQVSFLIPLPLLVALAAPVLLVVVAFIREMKHP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VDGSRALRSVGTTLLSFIYPVWLFSFAILALHLAYMRAGYVYPAIVMCVLWVVLVTKMAD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH IFAYVSGFLLGGRLFSRRLIPHISPKKTWEGLLGSWVLTNAAAIGLVFPMFRISVLSITQ HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVLMGCTSLIFLLSVYGDLAGSLVKRSLAIKDSGSLLPGIGGIFDLIDSPSFTVPFFWF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHH LLACIG HHHHHC >Mature Secondary Structure GVLLQRSFSTVVLLGLLAGALWWDCELGYYGLVCIFCILAAWEWRHMLLRSGKASQPNL CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH SFLFGVAYPVLLSWSCCITKFRESALAEQVSFLIPLPLLVALAAPVLLVVVAFIREMKHP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VDGSRALRSVGTTLLSFIYPVWLFSFAILALHLAYMRAGYVYPAIVMCVLWVVLVTKMAD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH IFAYVSGFLLGGRLFSRRLIPHISPKKTWEGLLGSWVLTNAAAIGLVFPMFRISVLSITQ HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVLMGCTSLIFLLSVYGDLAGSLVKRSLAIKDSGSLLPGIGGIFDLIDSPSFTVPFFWF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHH LLACIG HHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]