Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is cdsA [H]

Identifier: 187736121

GI number: 187736121

Start: 1968148

End: 1969068

Strand: Direct

Name: cdsA [H]

Synonym: Amuc_1632

Alternate gene names: 187736121

Gene position: 1968148-1969068 (Clockwise)

Preceding gene: 187736118

Following gene: 187736122

Centisome position: 73.88

GC content: 55.7

Gene sequence:

>921_bases
ATGGGTGTTCTGCTGCAGCGTTCATTCAGCACCGTGGTTTTGCTTGGGTTGCTGGCCGGGGCTTTGTGGTGGGACTGCGA
ACTTGGGTATTACGGTCTGGTCTGCATTTTCTGTATTTTGGCCGCCTGGGAATGGCGGCACATGCTGCTGCGTTCCGGAA
AAGCCTCCCAGCCGAACTTGAGCTTTCTTTTCGGAGTGGCGTACCCCGTATTGCTGTCCTGGTCATGCTGCATCACTAAA
TTCCGGGAAAGCGCCCTTGCGGAACAGGTTTCTTTCCTCATCCCCCTTCCTCTTCTGGTGGCACTTGCCGCTCCGGTCCT
CCTGGTAGTGGTTGCCTTCATCCGTGAGATGAAGCACCCGGTGGATGGAAGCAGGGCTCTCCGTTCCGTGGGTACTACGC
TGCTTTCCTTTATTTATCCCGTCTGGCTGTTCTCTTTTGCCATTCTGGCCCTGCATCTGGCGTATATGAGGGCGGGGTAT
GTTTATCCGGCCATTGTCATGTGTGTGCTGTGGGTCGTTCTGGTAACGAAGATGGCGGACATTTTTGCCTACGTGAGCGG
GTTCCTGCTGGGCGGCCGCCTTTTTTCCCGCAGGCTCATTCCCCACATCAGCCCCAAGAAAACGTGGGAGGGCCTCCTCG
GTTCCTGGGTGCTGACGAATGCGGCGGCCATAGGGCTGGTTTTCCCGATGTTCAGAATTTCCGTCTTGTCCATAACCCAG
GTACTGGTACTGATGGGATGCACATCCCTCATTTTCCTGCTTTCCGTTTACGGGGATCTGGCCGGGTCCCTGGTTAAACG
CAGCCTGGCCATCAAGGATTCCGGTTCCCTGCTGCCGGGGATAGGAGGAATTTTTGATTTGATTGACAGCCCTTCCTTTA
CCGTGCCGTTTTTCTGGTTTCTGCTGGCCTGCATCGGCTGA

Upstream 100 bases:

>100_bases
GGAAAGGAAGCATTTCAGGATTGAGGTTGCAACGGTTTTCTGTACACTTCGCGTGATGATGAGCATACCGAATCGGGACA
AGAGTTTTTCCGGAAGCAAG

Downstream 100 bases:

>100_bases
ATGTCCCCGGCACGAACGGATTCCCTGTAACCCGGTATGGTTTTTTCTTCTCTTCCCATTGAGGAAATCCGCGGAGAATT
GATGGAGGCTCTGCGGGTTC

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MGVLLQRSFSTVVLLGLLAGALWWDCELGYYGLVCIFCILAAWEWRHMLLRSGKASQPNLSFLFGVAYPVLLSWSCCITK
FRESALAEQVSFLIPLPLLVALAAPVLLVVVAFIREMKHPVDGSRALRSVGTTLLSFIYPVWLFSFAILALHLAYMRAGY
VYPAIVMCVLWVVLVTKMADIFAYVSGFLLGGRLFSRRLIPHISPKKTWEGLLGSWVLTNAAAIGLVFPMFRISVLSITQ
VLVLMGCTSLIFLLSVYGDLAGSLVKRSLAIKDSGSLLPGIGGIFDLIDSPSFTVPFFWFLLACIG

Sequences:

>Translated_306_residues
MGVLLQRSFSTVVLLGLLAGALWWDCELGYYGLVCIFCILAAWEWRHMLLRSGKASQPNLSFLFGVAYPVLLSWSCCITK
FRESALAEQVSFLIPLPLLVALAAPVLLVVVAFIREMKHPVDGSRALRSVGTTLLSFIYPVWLFSFAILALHLAYMRAGY
VYPAIVMCVLWVVLVTKMADIFAYVSGFLLGGRLFSRRLIPHISPKKTWEGLLGSWVLTNAAAIGLVFPMFRISVLSITQ
VLVLMGCTSLIFLLSVYGDLAGSLVKRSLAIKDSGSLLPGIGGIFDLIDSPSFTVPFFWFLLACIG
>Mature_305_residues
GVLLQRSFSTVVLLGLLAGALWWDCELGYYGLVCIFCILAAWEWRHMLLRSGKASQPNLSFLFGVAYPVLLSWSCCITKF
RESALAEQVSFLIPLPLLVALAAPVLLVVVAFIREMKHPVDGSRALRSVGTTLLSFIYPVWLFSFAILALHLAYMRAGYV
YPAIVMCVLWVVLVTKMADIFAYVSGFLLGGRLFSRRLIPHISPKKTWEGLLGSWVLTNAAAIGLVFPMFRISVLSITQV
LVLMGCTSLIFLLSVYGDLAGSLVKRSLAIKDSGSLLPGIGGIFDLIDSPSFTVPFFWFLLACIG

Specific function: Phospholipid biosynthesis. [C]

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=299, Percent_Identity=31.438127090301, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1787677, Length=130, Percent_Identity=39.2307692307692, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 33640; Mature: 33509

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVLLQRSFSTVVLLGLLAGALWWDCELGYYGLVCIFCILAAWEWRHMLLRSGKASQPNL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
SFLFGVAYPVLLSWSCCITKFRESALAEQVSFLIPLPLLVALAAPVLLVVVAFIREMKHP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VDGSRALRSVGTTLLSFIYPVWLFSFAILALHLAYMRAGYVYPAIVMCVLWVVLVTKMAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
IFAYVSGFLLGGRLFSRRLIPHISPKKTWEGLLGSWVLTNAAAIGLVFPMFRISVLSITQ
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLVLMGCTSLIFLLSVYGDLAGSLVKRSLAIKDSGSLLPGIGGIFDLIDSPSFTVPFFWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHH
LLACIG
HHHHHC
>Mature Secondary Structure 
GVLLQRSFSTVVLLGLLAGALWWDCELGYYGLVCIFCILAAWEWRHMLLRSGKASQPNL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
SFLFGVAYPVLLSWSCCITKFRESALAEQVSFLIPLPLLVALAAPVLLVVVAFIREMKHP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VDGSRALRSVGTTLLSFIYPVWLFSFAILALHLAYMRAGYVYPAIVMCVLWVVLVTKMAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
IFAYVSGFLLGGRLFSRRLIPHISPKKTWEGLLGSWVLTNAAAIGLVFPMFRISVLSITQ
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLVLMGCTSLIFLLSVYGDLAGSLVKRSLAIKDSGSLLPGIGGIFDLIDSPSFTVPFFWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHH
LLACIG
HHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]