Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is nuoK

Identifier: 187736096

GI number: 187736096

Start: 1932931

End: 1933248

Strand: Reverse

Name: nuoK

Synonym: Amuc_1607

Alternate gene names: 187736096

Gene position: 1933248-1932931 (Counterclockwise)

Preceding gene: 187736097

Following gene: 187736095

Centisome position: 72.57

GC content: 58.18

Gene sequence:

>318_bases
ATGATACCTCTTACGCATTATCTGATCCTCTCCGGCGTCCTGTTCGCCATCGGCCTGATGGGGGTGATTGTCCGGCGCGA
CATCATCGTCATCTTCATGTGCCTGGAAATGATGCTCAGTGCTGCCAACCTGTCCCTGGTAGCGTTTTCCCGCGCCCAGG
GCACTATGGGCCTGCCCAACTATGACGGCCAGGCCCTCTCCATCTTTATCCTGACCATCGCCGCAGCGGAAGTGGCTATC
GGCCTAGCCCTCATCGTCTCCCTGTACAGGGCCAGGCGCACGGCCAGCACGCAAGATCTCAACACGCTGAAAGATTAA

Upstream 100 bases:

>100_bases
GTCATCGCCGGTCTGGCCCTGCTGGTGGCTTCCATCGGCGTCGTCGTGCTGAGCCGCCGCCCTTCCGGAAAATAAAGAAC
CCCTTACCACAGCCATCACC

Downstream 100 bases:

>100_bases
GAGCAACACACTACTCCACGAACATGTTCAATATTGATATTCAATACACCTGGCTTCTGCTCTTCCTGCCGCTGGTCGTA
GCCGCCTTTGACTGGTTCCT

Product: NADH-ubiquinone oxidoreductase chain 4L

Products: NA

Alternate protein names: NADH dehydrogenase I subunit K; NDH-1 subunit K

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MIPLTHYLILSGVLFAIGLMGVIVRRDIIVIFMCLEMMLSAANLSLVAFSRAQGTMGLPNYDGQALSIFILTIAAAEVAI
GLALIVSLYRARRTASTQDLNTLKD

Sequences:

>Translated_105_residues
MIPLTHYLILSGVLFAIGLMGVIVRRDIIVIFMCLEMMLSAANLSLVAFSRAQGTMGLPNYDGQALSIFILTIAAAEVAI
GLALIVSLYRARRTASTQDLNTLKD
>Mature_105_residues
MIPLTHYLILSGVLFAIGLMGVIVRRDIIVIFMCLEMMLSAANLSLVAFSRAQGTMGLPNYDGQALSIFILTIAAAEVAI
GLALIVSLYRARRTASTQDLNTLKD

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0713

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 4L family

Homologues:

Organism=Escherichia coli, GI1788615, Length=104, Percent_Identity=36.5384615384615, Blast_Score=74, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NUOK_AKKM8 (B2ULY3)

Other databases:

- EMBL:   CP001071
- RefSeq:   YP_001878208.1
- GeneID:   6275822
- GenomeReviews:   CP001071_GR
- KEGG:   amu:Amuc_1607
- HOGENOM:   HBG673066
- OMA:   RNAIVIF
- ProtClustDB:   CLSK2337911
- GO:   GO:0006810
- HAMAP:   MF_01456
- InterPro:   IPR001133

Pfam domain/function: PF00420 Oxidored_q2

EC number: =1.6.99.5

Molecular weight: Translated: 11344; Mature: 11344

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1d6e0778)-; HASH(0x1df51aa4)-; HASH(0x1e0a63b8)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPLTHYLILSGVLFAIGLMGVIVRRDIIVIFMCLEMMLSAANLSLVAFSRAQGTMGLPN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCC
YDGQALSIFILTIAAAEVAIGLALIVSLYRARRTASTQDLNTLKD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCH
>Mature Secondary Structure
MIPLTHYLILSGVLFAIGLMGVIVRRDIIVIFMCLEMMLSAANLSLVAFSRAQGTMGLPN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCC
YDGQALSIFILTIAAAEVAIGLALIVSLYRARRTASTQDLNTLKD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA