Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187736088
Identifier: 187736088
GI number: 187736088
Start: 1923432
End: 1925207
Strand: Reverse
Name: 187736088
Synonym: Amuc_1599
Alternate gene names: NA
Gene position: 1925207-1923432 (Counterclockwise)
Preceding gene: 187736091
Following gene: 187736087
Centisome position: 72.26
GC content: 55.24
Gene sequence:
>1776_bases ATGCTAGATTACTTACGTAAACATACAATCGTCATCATGGCAGCCATGGCCCTGGTGTTTGTGGGCCTCATGTTCGTCGG CGGGGACGTAAGCGGCGGCTCCCTGACCGGCATGTTCAAGCAGACTTTTGTTTCCGTGGACGGGAAATCTTATGGGGAAA AGGATTATAACAATATGGGCAGGACCGGCCTGTCCGTGGCTTTCTCCTTCCCTTCCACCTTCGGTCCGCTGCTTCAGGAC AATTTCAGCTCGGAAGAAAACCTGCGCGAACTCTGCCATCTGCTGAAAACAAATAATCCCAATGCGGCTTTCCTGGCCTA CCGCGGCATTATCCGCCGGGAGGCGGGACGCCTGGGCTTGACTCCCAGTACCGCGGAAATTGACGATGCCATTTGCAATA TTCCAGAGTTCCAGGACGATAAAGGCGTTTTCGACCCCCAAAAATACGATAATTTCATTTCCATGCGCGGCAACATGGGT AAAAAGCTTCAGGAGGAACTGCTGCGCGGTCTGATGGAAGACACCATCAGCCTGGAGCGCATCAAGGACGTGCTGGCCGG GGGTATCTCCGTGGAGCCCGGTTTTGCCGAGGCTGTAGCGGAATCCAACAGCCAGCAAATTACAATCAACACCGCCTTCC TGGAAAAAAGCGCCTTCCGTCCCAAGACGGATCCCGGAGAAGAGGAAATAAAAACCTTCTGGGACAAGCACAAGGAAAAT TACAAAAATGAGGAAGCTCGCTTCTTCACCGTTTACACCTTCATTCCCGCAGGCGATGCCCAGGCACCCAAGCCCGGAGA CATTTCCAACGCCACCATGGAGACCATGAATCTGGTGGAAAATGACATCTGGGAACCGCTGAACGCCACCAACGGCAGGA ACATGGACCAGGCCATCAGCGAAGCCCTGGCCAAGACTCCCGGCGTCTGCAAAATGGAGAAAAAGTCCTACACGGCCGTA ACGCGTAAAAACGCGCCTCAGGAAATCAACCAGGCAATCAACCAATCCGCTTCCGACGGACGCAGCGCCAATCTGCTGGA TGTGGCTTTCTCCCTGGCGGGAGCCCCGGCCCTGAATGCGGATGCGGATGCCAAGGCCATTGAAGAAGCGCGCGCCAAGA CCGGAGCCGAACAGATCAGCACCATGCAGGTGCTGGAAAACGGACAAGTCGTCCTGATCCGTCTGGAAGGCATTACTCCG GTCAAAGCCCTGCCTTACGAAACCGCCCGCAACAGCGCCCGCGCCGACCTGCTGGAAAGCATGACCGTTGAATCCATGAA TAAGGCCGCCACGGAACTCAATACGGAATTGCAGAAGGCGGAAAACCCCGTGGAACAGTTCAATGCCATTGCCGGAAAAA CCGGTGCCAAAACCGCCTCTTACGGTCCCTTTGTCAATCCAAACGTACTCTTGAGCAGCGTCAACCTGCAAAACGCCAAA ACACAGGAAGAGCTCCAGTCTCTTCTGGAACGGGCCATGAATTCCCGCCTGGCCCCTCCCAAAGAGCTCCCGGCCCCTGA AGAAGTATTCCAGGCGGCTTCCGTCATCAACCCCGGCCAGATGGCTCAGCCCATCAACACGGGGGACGGCATCCTGCTGA CCCAGCTCGTCAAGCGCGAACTGGAGGATACGCCGGAATTCCAAATCAAATCTACCCAGCAAATTGCTCCGGCTCTGACT GCCCAGGCAAAATCCATGATCATGCTGGACTGGCTGAAAGCGTGCATCACCCAATATAAGGTGGAAATCGCTCCCATCCT GAACCAGGAACGCTAA
Upstream 100 bases:
>100_bases CGTTCTTGCCTAGCGGAGGGAAAAAGTGTAAAAGGTTCGGGCTGCCCGGGCTGCCGTCAGCTCATGGCCGGCTACACGTA CATTTTCAACCTGACATTCC
Downstream 100 bases:
>100_bases CGTTTTCCCTTTCATGACAACCGTCAGTGAGCCCGTCTTTTTCTCACAGGCCTTGAACACCGTCTGAACGCATTCGCCAT GATGGCCTCCGCCCGGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 591; Mature: 591
Protein sequence:
>591_residues MLDYLRKHTIVIMAAMALVFVGLMFVGGDVSGGSLTGMFKQTFVSVDGKSYGEKDYNNMGRTGLSVAFSFPSTFGPLLQD NFSSEENLRELCHLLKTNNPNAAFLAYRGIIRREAGRLGLTPSTAEIDDAICNIPEFQDDKGVFDPQKYDNFISMRGNMG KKLQEELLRGLMEDTISLERIKDVLAGGISVEPGFAEAVAESNSQQITINTAFLEKSAFRPKTDPGEEEIKTFWDKHKEN YKNEEARFFTVYTFIPAGDAQAPKPGDISNATMETMNLVENDIWEPLNATNGRNMDQAISEALAKTPGVCKMEKKSYTAV TRKNAPQEINQAINQSASDGRSANLLDVAFSLAGAPALNADADAKAIEEARAKTGAEQISTMQVLENGQVVLIRLEGITP VKALPYETARNSARADLLESMTVESMNKAATELNTELQKAENPVEQFNAIAGKTGAKTASYGPFVNPNVLLSSVNLQNAK TQEELQSLLERAMNSRLAPPKELPAPEEVFQAASVINPGQMAQPINTGDGILLTQLVKRELEDTPEFQIKSTQQIAPALT AQAKSMIMLDWLKACITQYKVEIAPILNQER
Sequences:
>Translated_591_residues MLDYLRKHTIVIMAAMALVFVGLMFVGGDVSGGSLTGMFKQTFVSVDGKSYGEKDYNNMGRTGLSVAFSFPSTFGPLLQD NFSSEENLRELCHLLKTNNPNAAFLAYRGIIRREAGRLGLTPSTAEIDDAICNIPEFQDDKGVFDPQKYDNFISMRGNMG KKLQEELLRGLMEDTISLERIKDVLAGGISVEPGFAEAVAESNSQQITINTAFLEKSAFRPKTDPGEEEIKTFWDKHKEN YKNEEARFFTVYTFIPAGDAQAPKPGDISNATMETMNLVENDIWEPLNATNGRNMDQAISEALAKTPGVCKMEKKSYTAV TRKNAPQEINQAINQSASDGRSANLLDVAFSLAGAPALNADADAKAIEEARAKTGAEQISTMQVLENGQVVLIRLEGITP VKALPYETARNSARADLLESMTVESMNKAATELNTELQKAENPVEQFNAIAGKTGAKTASYGPFVNPNVLLSSVNLQNAK TQEELQSLLERAMNSRLAPPKELPAPEEVFQAASVINPGQMAQPINTGDGILLTQLVKRELEDTPEFQIKSTQQIAPALT AQAKSMIMLDWLKACITQYKVEIAPILNQER >Mature_591_residues MLDYLRKHTIVIMAAMALVFVGLMFVGGDVSGGSLTGMFKQTFVSVDGKSYGEKDYNNMGRTGLSVAFSFPSTFGPLLQD NFSSEENLRELCHLLKTNNPNAAFLAYRGIIRREAGRLGLTPSTAEIDDAICNIPEFQDDKGVFDPQKYDNFISMRGNMG KKLQEELLRGLMEDTISLERIKDVLAGGISVEPGFAEAVAESNSQQITINTAFLEKSAFRPKTDPGEEEIKTFWDKHKEN YKNEEARFFTVYTFIPAGDAQAPKPGDISNATMETMNLVENDIWEPLNATNGRNMDQAISEALAKTPGVCKMEKKSYTAV TRKNAPQEINQAINQSASDGRSANLLDVAFSLAGAPALNADADAKAIEEARAKTGAEQISTMQVLENGQVVLIRLEGITP VKALPYETARNSARADLLESMTVESMNKAATELNTELQKAENPVEQFNAIAGKTGAKTASYGPFVNPNVLLSSVNLQNAK TQEELQSLLERAMNSRLAPPKELPAPEEVFQAASVINPGQMAQPINTGDGILLTQLVKRELEDTPEFQIKSTQQIAPALT AQAKSMIMLDWLKACITQYKVEIAPILNQER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64668; Mature: 64668
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDYLRKHTIVIMAAMALVFVGLMFVGGDVSGGSLTGMFKQTFVSVDGKSYGEKDYNNMG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCC RTGLSVAFSFPSTFGPLLQDNFSSEENLRELCHLLKTNNPNAAFLAYRGIIRREAGRLGL CCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCC TPSTAEIDDAICNIPEFQDDKGVFDPQKYDNFISMRGNMGKKLQEELLRGLMEDTISLER CCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IKDVLAGGISVEPGFAEAVAESNSQQITINTAFLEKSAFRPKTDPGEEEIKTFWDKHKEN HHHHHHCCCCCCCCHHHHHHCCCCCEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC YKNEEARFFTVYTFIPAGDAQAPKPGDISNATMETMNLVENDIWEPLNATNGRNMDQAIS CCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH EALAKTPGVCKMEKKSYTAVTRKNAPQEINQAINQSASDGRSANLLDVAFSLAGAPALNA HHHHCCCCCEEECCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCC DADAKAIEEARAKTGAEQISTMQVLENGQVVLIRLEGITPVKALPYETARNSARADLLES CCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCHHHCCHHHHHHHHH MTVESMNKAATELNTELQKAENPVEQFNAIAGKTGAKTASYGPFVNPNVLLSSVNLQNAK HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEECCCCCCH TQEELQSLLERAMNSRLAPPKELPAPEEVFQAASVINPGQMAQPINTGDGILLTQLVKRE HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHHHHH LEDTPEFQIKSTQQIAPALTAQAKSMIMLDWLKACITQYKVEIAPILNQER HCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLDYLRKHTIVIMAAMALVFVGLMFVGGDVSGGSLTGMFKQTFVSVDGKSYGEKDYNNMG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCC RTGLSVAFSFPSTFGPLLQDNFSSEENLRELCHLLKTNNPNAAFLAYRGIIRREAGRLGL CCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCC TPSTAEIDDAICNIPEFQDDKGVFDPQKYDNFISMRGNMGKKLQEELLRGLMEDTISLER CCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IKDVLAGGISVEPGFAEAVAESNSQQITINTAFLEKSAFRPKTDPGEEEIKTFWDKHKEN HHHHHHCCCCCCCCHHHHHHCCCCCEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC YKNEEARFFTVYTFIPAGDAQAPKPGDISNATMETMNLVENDIWEPLNATNGRNMDQAIS CCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH EALAKTPGVCKMEKKSYTAVTRKNAPQEINQAINQSASDGRSANLLDVAFSLAGAPALNA HHHHCCCCCEEECCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCC DADAKAIEEARAKTGAEQISTMQVLENGQVVLIRLEGITPVKALPYETARNSARADLLES CCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCHHHCCHHHHHHHHH MTVESMNKAATELNTELQKAENPVEQFNAIAGKTGAKTASYGPFVNPNVLLSSVNLQNAK HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEECCCCCCH TQEELQSLLERAMNSRLAPPKELPAPEEVFQAASVINPGQMAQPINTGDGILLTQLVKRE HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHHHHH LEDTPEFQIKSTQQIAPALTAQAKSMIMLDWLKACITQYKVEIAPILNQER HCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA