Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is dtpA [H]

Identifier: 187736087

GI number: 187736087

Start: 1921929

End: 1923284

Strand: Reverse

Name: dtpA [H]

Synonym: Amuc_1598

Alternate gene names: 187736087

Gene position: 1923284-1921929 (Counterclockwise)

Preceding gene: 187736088

Following gene: 187736085

Centisome position: 72.19

GC content: 55.83

Gene sequence:

>1356_bases
ATGAGCGCCCTGCCCTCCCAGTCCAGATACATCATCGGAACGGAAGCCTGTGAACGTTTCAGCTTCTACGGCATGAAGTC
CATCCTCATGCTGTACATGACGGGCCATCTGCTGATGAGCGACAACTGGGCCACCTCCACCCTTCATATTTTTATGGGAA
TGGTTTATCTGCTTCCCCTGGCGGGGGCCTGGCTGGCGGACAAGGTCTGGGGCCGATATAAAACCATTCTTTATATTTCC
CTGCTTTACTGCGTAGGACACGGAGTTCTGGCGACGGCGGATCTTTTCCACACCATTGAAGCGCGCCGTTACATTCTCAT
GGCGGGCCTGTTCATCATCGCTCTGGGAGCCGGAGGCATCAAGCCATGCGTCTCCGCCTTTATGGGAGACCAGATTCCTA
ATAAGTCCCCGCAGTTAATGACCAAGGCTTTCAATGCCTTCTACTGGGCTATCAACCTTGGCTCCTTCTTCTCCTTCCTG
GTCATTCCGGCCATGGAACAGCGTTACGGATACAGTTGGGCGTTTGCCGTCCCGGGCCTCTTCATGGGGGTTGCCACCTT
CGTCTTCTGGCTGGGCCGCAAAAAATACCACAAAACGCCTCCGGCCCGGAACAGCGGGCAGCCTGGCTTCTGGAAAGTCC
TTTTCATCATTCTGTTCCACGGAGGCTGGAAAAACGCAGAACAGCGCTGCGGAACTTCTGCCGTGGAAGACACCCGGCAC
ATCCTGAAAATCCTCTCCATCTTCGCCTTTATCATCCCATTCTGGTCCATTTTCGAACAGACGGCTTCTTCCTGGGTATC
CCAGGGCAGCAGGATGATTCCTCTTTCCATCCCGCTCCCGGGCGGTTCCTGGTCCATCGGGCCGGCCCAAATCCAGGCGG
CCAATCCCATTTTCGTCATGGTGTTCATCCCCCTCATCACCGTATTTGTTTATCCCAGGGTGGCAACGCTTGCAAGGCCC
CTGGTGCGCCTCGGAACGGGATTGGCCCTCAGCTCCGCTACATTCCTGATTGTCGCTTTCCTGCAATACCGGCTGGAGGA
AGGAACCTCCATGTCCATCGCATGGCAGCTGATTCCTTACTGCGTACTCACCATCTCTGAGATCCTGGTCAGCACCACGG
GCCTGGAATTCGCCTATACGCAAGCCCCGGCGCATTTGAAAAGCCTCATCACCAGTTTCTGGAACCTCACTATCTTTGCA
GGCAACATGCTGGTGGCCGCAATTACTTTTTTCCTGTCCAACGGAGAATCAGCCAACGCCATTTCCACGGACCGCTTCAT
CCTGTACGCCGTGCTCGCCGCCGTGGTGGCGGTCGCCTACTCCTTCCGGGCGCGCAGGTACGGAAAAACGGAATAA

Upstream 100 bases:

>100_bases
AGGCCTTGAACACCGTCTGAACGCATTCGCCATGATGGCCTCCGCCCGGAGGCCATCATTTTTATTACTCCTTCTCCATC
TCCCTCCTTTTCATCATCCA

Downstream 100 bases:

>100_bases
AGAAAGCACTGCCGTTCCCGGGCGCGTGGCCGGGTTTAACCATGTTTTGAAAAAACAATCAGGCCGTAACCAGCATGCGC
TCCTCCCATTCCCTCCGGCA

Product: amino acid/peptide transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MSALPSQSRYIIGTEACERFSFYGMKSILMLYMTGHLLMSDNWATSTLHIFMGMVYLLPLAGAWLADKVWGRYKTILYIS
LLYCVGHGVLATADLFHTIEARRYILMAGLFIIALGAGGIKPCVSAFMGDQIPNKSPQLMTKAFNAFYWAINLGSFFSFL
VIPAMEQRYGYSWAFAVPGLFMGVATFVFWLGRKKYHKTPPARNSGQPGFWKVLFIILFHGGWKNAEQRCGTSAVEDTRH
ILKILSIFAFIIPFWSIFEQTASSWVSQGSRMIPLSIPLPGGSWSIGPAQIQAANPIFVMVFIPLITVFVYPRVATLARP
LVRLGTGLALSSATFLIVAFLQYRLEEGTSMSIAWQLIPYCVLTISEILVSTTGLEFAYTQAPAHLKSLITSFWNLTIFA
GNMLVAAITFFLSNGESANAISTDRFILYAVLAAVVAVAYSFRARRYGKTE

Sequences:

>Translated_451_residues
MSALPSQSRYIIGTEACERFSFYGMKSILMLYMTGHLLMSDNWATSTLHIFMGMVYLLPLAGAWLADKVWGRYKTILYIS
LLYCVGHGVLATADLFHTIEARRYILMAGLFIIALGAGGIKPCVSAFMGDQIPNKSPQLMTKAFNAFYWAINLGSFFSFL
VIPAMEQRYGYSWAFAVPGLFMGVATFVFWLGRKKYHKTPPARNSGQPGFWKVLFIILFHGGWKNAEQRCGTSAVEDTRH
ILKILSIFAFIIPFWSIFEQTASSWVSQGSRMIPLSIPLPGGSWSIGPAQIQAANPIFVMVFIPLITVFVYPRVATLARP
LVRLGTGLALSSATFLIVAFLQYRLEEGTSMSIAWQLIPYCVLTISEILVSTTGLEFAYTQAPAHLKSLITSFWNLTIFA
GNMLVAAITFFLSNGESANAISTDRFILYAVLAAVVAVAYSFRARRYGKTE
>Mature_450_residues
SALPSQSRYIIGTEACERFSFYGMKSILMLYMTGHLLMSDNWATSTLHIFMGMVYLLPLAGAWLADKVWGRYKTILYISL
LYCVGHGVLATADLFHTIEARRYILMAGLFIIALGAGGIKPCVSAFMGDQIPNKSPQLMTKAFNAFYWAINLGSFFSFLV
IPAMEQRYGYSWAFAVPGLFMGVATFVFWLGRKKYHKTPPARNSGQPGFWKVLFIILFHGGWKNAEQRCGTSAVEDTRHI
LKILSIFAFIIPFWSIFEQTASSWVSQGSRMIPLSIPLPGGSWSIGPAQIQAANPIFVMVFIPLITVFVYPRVATLARPL
VRLGTGLALSSATFLIVAFLQYRLEEGTSMSIAWQLIPYCVLTISEILVSTTGLEFAYTQAPAHLKSLITSFWNLTIFAG
NMLVAAITFFLSNGESANAISTDRFILYAVLAAVVAVAYSFRARRYGKTE

Specific function: Proton-dependent permease that transports di- and tripeptides [H]

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpA subfamily [H]

Homologues:

Organism=Homo sapiens, GI226371746, Length=473, Percent_Identity=30.2325581395349, Blast_Score=186, Evalue=5e-47,
Organism=Homo sapiens, GI4827008, Length=376, Percent_Identity=30.8510638297872, Blast_Score=182, Evalue=7e-46,
Organism=Homo sapiens, GI226371748, Length=466, Percent_Identity=28.5407725321888, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI21717816, Length=458, Percent_Identity=26.2008733624454, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI7706117, Length=531, Percent_Identity=23.728813559322, Blast_Score=99, Evalue=1e-20,
Organism=Escherichia coli, GI1787922, Length=429, Percent_Identity=24.7086247086247, Blast_Score=111, Evalue=9e-26,
Organism=Escherichia coli, GI1790572, Length=198, Percent_Identity=32.3232323232323, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1789911, Length=413, Percent_Identity=23.4866828087167, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1786927, Length=202, Percent_Identity=28.7128712871287, Blast_Score=86, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71987453, Length=371, Percent_Identity=35.3099730458221, Blast_Score=204, Evalue=8e-53,
Organism=Caenorhabditis elegans, GI17569141, Length=411, Percent_Identity=32.360097323601, Blast_Score=184, Evalue=9e-47,
Organism=Caenorhabditis elegans, GI17541704, Length=375, Percent_Identity=30.4, Blast_Score=146, Evalue=3e-35,
Organism=Saccharomyces cerevisiae, GI6322946, Length=458, Percent_Identity=25.9825327510917, Blast_Score=122, Evalue=1e-28,
Organism=Drosophila melanogaster, GI28571102, Length=445, Percent_Identity=33.0337078651685, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI28571100, Length=445, Percent_Identity=33.0337078651685, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI28571098, Length=410, Percent_Identity=33.9024390243902, Blast_Score=208, Evalue=5e-54,
Organism=Drosophila melanogaster, GI24639583, Length=367, Percent_Identity=35.4223433242507, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24639585, Length=367, Percent_Identity=35.4223433242507, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI24639581, Length=367, Percent_Identity=35.4223433242507, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI24645459, Length=473, Percent_Identity=26.215644820296, Blast_Score=113, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 50099; Mature: 49967

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS01022 PTR2_1 ; PS01023 PTR2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SALPSQSRYIIGTEACERFSFYGMKSILMLYMTGHLLMSDNWATSTLHIFMGMVYLLPL
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHH
AGAWLADKVWGRYKTILYISLLYCVGHGVLATADLFHTIEARRYILMAGLFIIALGAGGI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
KPCVSAFMGDQIPNKSPQLMTKAFNAFYWAINLGSFFSFLVIPAMEQRYGYSWAFAVPGL
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
FMGVATFVFWLGRKKYHKTPPARNSGQPGFWKVLFIILFHGGWKNAEQRCGTSAVEDTRH
HHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHH
ILKILSIFAFIIPFWSIFEQTASSWVSQGSRMIPLSIPLPGGSWSIGPAQIQAANPIFVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHEECCCCCHHH
VFIPLITVFVYPRVATLARPLVRLGTGLALSSATFLIVAFLQYRLEEGTSMSIAWQLIPY
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
CVLTISEILVSTTGLEFAYTQAPAHLKSLITSFWNLTIFAGNMLVAAITFFLSNGESANA
HHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ISTDRFILYAVLAAVVAVAYSFRARRYGKTE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA