Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736085

Identifier: 187736085

GI number: 187736085

Start: 1919317

End: 1920537

Strand: Reverse

Name: 187736085

Synonym: Amuc_1596

Alternate gene names: NA

Gene position: 1920537-1919317 (Counterclockwise)

Preceding gene: 187736087

Following gene: 187736084

Centisome position: 72.09

GC content: 58.89

Gene sequence:

>1221_bases
ATGAGAGCCTTGGTCTATGATTGCAGCGCGGGCATCAGCGGAGATATGAATCTGGCCGCCCTGATTGATTTGGGAGCGGA
CCGGGAAAACCTGGAACGGGAACTGTCCAAATTGCATGTGCACGGGGAGTGGAAGCTGGAATGCCGCCCGGCGCAGCAGC
ACGGCATCCGGGGAACACGGATTGACGTGCTGACGGAGGAAGAAGGGCATTCCGGCAGCAGCCATGCGCACCATCACCGA
ACTATGGCGGATATACGAAAGCTTATTGAGACAAGCGCCCTTTCCAATACCGTAAAACGGACGGCCCTTTCTATTTTCAC
CCTGCTGGCGGAGGCGGAAGCCCGCGTACACGGCACTACTTCTGAAGAAGTACATTTCCATGAAGTGGGCGCGGTGGATT
CCATCATCGATATCGCGGGAGCTGCCATCTGCCTGGAAATGCTCCGGGTGGACACCGTCTTCACCGGACCGGTGGAGCTG
GGGTCTGGCACCGTAACCTGCCAGCACGGAACAATGCCCGTTCCTGCGCCGGCAACGGCTTTGCTGGCGAAACATTTCCG
GGCCACCTTGAATGGAACCACCCATGAGGCCACTACACCCACCGGAGCCGCCTACATTGCCGCCCTGGCGCAGCCCGTCC
CCTCTCCGCTGGCAGGCCGTATTACCGCAACCGGCTATGGGATCGGCCACCGCCAGGGACTTCCCGTACCGAATATTCTA
CGGGTGATGCTGGTAGAAACGGAAGAAGAGGAAACTTCCCCGGAACTGCTGACGGAGCTGTGCGCCAATATAGACGATAT
GACGCCGGAACAGACAGCCTACCTGGCGGAAAAGCTGATGGAGGCAGGTGCTCTGGATACCTGGCAGGAGTCCGTCTGCA
TGAAGAAAGGCCGTCTGGCAGTCAAGGTTTGCGCCCTGTGCCAGCCGGAACAGACGGACCGCGTGCGGGAAGCCTTCTTC
CGGCACAGCAGCACGCCGGGCATCAGGCAGCATGGCATGCTCCGCCATATTCTGCGCCGGGAAAGCGCCCCTGTCCACAC
TCCCCATGGAACGGTTCATGTAAAAACTTCTTTCATGCACGGCCGCCCCCATTACCGGAAAGCGGAATTTGAAGATTGCA
GAATCCTGGCGGAAAAAACCGGATTGCCGCTGGGACAATGCCAGCTGATGGGGCTTTTTCCCACATCTTCCCATGACAAC
GACGCCACAGACTCCGTTTGA

Upstream 100 bases:

>100_bases
GCAATCCGCCAAACCCGGTCCGCCAGGCACCGGGCCCTCTCCCGGGATAAGGCTCATTTTGACCTTGAGCCAGGAGTTTT
TCCTTCTACACTGGGCCATC

Downstream 100 bases:

>100_bases
ACGGCTTCGCGCCGTCCTTCTCCCCAGGAAACGCATTGCCGTCGCCTTGTCCGGGGGGCTGGACAGCAGCGTGTTGCTTG
CCGCCGCCGTCCGTATCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MRALVYDCSAGISGDMNLAALIDLGADRENLERELSKLHVHGEWKLECRPAQQHGIRGTRIDVLTEEEGHSGSSHAHHHR
TMADIRKLIETSALSNTVKRTALSIFTLLAEAEARVHGTTSEEVHFHEVGAVDSIIDIAGAAICLEMLRVDTVFTGPVEL
GSGTVTCQHGTMPVPAPATALLAKHFRATLNGTTHEATTPTGAAYIAALAQPVPSPLAGRITATGYGIGHRQGLPVPNIL
RVMLVETEEEETSPELLTELCANIDDMTPEQTAYLAEKLMEAGALDTWQESVCMKKGRLAVKVCALCQPEQTDRVREAFF
RHSSTPGIRQHGMLRHILRRESAPVHTPHGTVHVKTSFMHGRPHYRKAEFEDCRILAEKTGLPLGQCQLMGLFPTSSHDN
DATDSV

Sequences:

>Translated_406_residues
MRALVYDCSAGISGDMNLAALIDLGADRENLERELSKLHVHGEWKLECRPAQQHGIRGTRIDVLTEEEGHSGSSHAHHHR
TMADIRKLIETSALSNTVKRTALSIFTLLAEAEARVHGTTSEEVHFHEVGAVDSIIDIAGAAICLEMLRVDTVFTGPVEL
GSGTVTCQHGTMPVPAPATALLAKHFRATLNGTTHEATTPTGAAYIAALAQPVPSPLAGRITATGYGIGHRQGLPVPNIL
RVMLVETEEEETSPELLTELCANIDDMTPEQTAYLAEKLMEAGALDTWQESVCMKKGRLAVKVCALCQPEQTDRVREAFF
RHSSTPGIRQHGMLRHILRRESAPVHTPHGTVHVKTSFMHGRPHYRKAEFEDCRILAEKTGLPLGQCQLMGLFPTSSHDN
DATDSV
>Mature_406_residues
MRALVYDCSAGISGDMNLAALIDLGADRENLERELSKLHVHGEWKLECRPAQQHGIRGTRIDVLTEEEGHSGSSHAHHHR
TMADIRKLIETSALSNTVKRTALSIFTLLAEAEARVHGTTSEEVHFHEVGAVDSIIDIAGAAICLEMLRVDTVFTGPVEL
GSGTVTCQHGTMPVPAPATALLAKHFRATLNGTTHEATTPTGAAYIAALAQPVPSPLAGRITATGYGIGHRQGLPVPNIL
RVMLVETEEEETSPELLTELCANIDDMTPEQTAYLAEKLMEAGALDTWQESVCMKKGRLAVKVCALCQPEQTDRVREAFF
RHSSTPGIRQHGMLRHILRRESAPVHTPHGTVHVKTSFMHGRPHYRKAEFEDCRILAEKTGLPLGQCQLMGLFPTSSHDN
DATDSV

Specific function: Unknown

COG id: COG1641

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0272 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1596_AKKM8 (B2ULM9)

Other databases:

- EMBL:   CP001071
- RefSeq:   YP_001878197.1
- GeneID:   6275611
- GenomeReviews:   CP001071_GR
- KEGG:   amu:Amuc_1596
- HOGENOM:   HBG733311
- OMA:   IVGTCLG
- ProtClustDB:   CLSK2801824
- HAMAP:   MF_01074
- InterPro:   IPR002822
- TIGRFAMs:   TIGR00299

Pfam domain/function: PF01969 DUF111

EC number: NA

Molecular weight: Translated: 44218; Mature: 44218

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALVYDCSAGISGDMNLAALIDLGADRENLERELSKLHVHGEWKLECRPAQQHGIRGTR
CCEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHEEECCEEEEEEECHHHCCCCCCE
IDVLTEEEGHSGSSHAHHHRTMADIRKLIETSALSNTVKRTALSIFTLLAEAEARVHGTT
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SEEVHFHEVGAVDSIIDIAGAAICLEMLRVDTVFTGPVELGSGTVTCQHGTMPVPAPATA
CCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCEECCCCEEEEECCCCCCCCCHHH
LLAKHFRATLNGTTHEATTPTGAAYIAALAQPVPSPLAGRITATGYGIGHRQGLPVPNIL
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHH
RVMLVETEEEETSPELLTELCANIDDMTPEQTAYLAEKLMEAGALDTWQESVCMKKGRLA
HHHEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHH
VKVCALCQPEQTDRVREAFFRHSSTPGIRQHGMLRHILRRESAPVHTPHGTVHVKTSFMH
EEHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEC
GRPHYRKAEFEDCRILAEKTGLPLGQCQLMGLFPTSSHDNDATDSV
CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRALVYDCSAGISGDMNLAALIDLGADRENLERELSKLHVHGEWKLECRPAQQHGIRGTR
CCEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHEEECCEEEEEEECHHHCCCCCCE
IDVLTEEEGHSGSSHAHHHRTMADIRKLIETSALSNTVKRTALSIFTLLAEAEARVHGTT
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SEEVHFHEVGAVDSIIDIAGAAICLEMLRVDTVFTGPVELGSGTVTCQHGTMPVPAPATA
CCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCEECCCCEEEEECCCCCCCCCHHH
LLAKHFRATLNGTTHEATTPTGAAYIAALAQPVPSPLAGRITATGYGIGHRQGLPVPNIL
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHH
RVMLVETEEEETSPELLTELCANIDDMTPEQTAYLAEKLMEAGALDTWQESVCMKKGRLA
HHHEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHH
VKVCALCQPEQTDRVREAFFRHSSTPGIRQHGMLRHILRRESAPVHTPHGTVHVKTSFMH
EEHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEC
GRPHYRKAEFEDCRILAEKTGLPLGQCQLMGLFPTSSHDNDATDSV
CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA