Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736084
Identifier: 187736084
GI number: 187736084
Start: 1918530
End: 1919345
Strand: Reverse
Name: 187736084
Synonym: Amuc_1595
Alternate gene names: NA
Gene position: 1919345-1918530 (Counterclockwise)
Preceding gene: 187736085
Following gene: 187736083
Centisome position: 72.04
GC content: 62.38
Gene sequence:
>816_bases ATGACAACGACGCCACAGACTCCGTTTGAACGGCTTCGCGCCGTCCTTCTCCCCAGGAAACGCATTGCCGTCGCCTTGTC CGGGGGGCTGGACAGCAGCGTGTTGCTTGCCGCCGCCGTCCGTATCCTGGGAGCGGATCACTGCCTGGCACTGACTGCGC GAACGCCCTACGTGATGGAGGAGGAAGTGCGGGACAGCACGGCGTTGTGCCGCCGCCTGGGCGTCCGGCAGGAAAAACTG GCGTTTCCCATCCTTCCCGCCCTTGCGAATAATCCTCCCCTGCGCTGCTACCTGTGCAAGCATGCCCTGTTTTCCTCCCT GGCAGCCAGAGCGGCTGAGATGGGGTTCCCCCTGCTGGCGGACGGTTCCAATCTTGACGACCTGGACGATTACCGGCCAG GCCGCAAAGCTTTGCAGGAGCTCGGCATCCCGAGTCCCTTTCTGGAAGCTTCCATGGATAAGGAGGATATCCGCCGGCTG GCCTGCCGGCTGGGTCTTCCGGAATCAGTCAGCGGCAAACCGGCCTATGCGTGCCTGCTAACCCGCCTGGAACACAACCG CCCCGTAACGGAAGTTCTGCTGAGACGCGTGGACGCAGCGGAATCTTTCCTGAGAACCCTGGGTCTGAAAGGCTGCCGTG TCCGTGCTCACGGAGACAGCCTGGCCCGCATTGAATTGCCGGAAAAGGAACGCAGACTGTTCTGGGACGGACAGCTTGCC TCCACCGCAGCACGCCGGCTGCGGGAACTGGGCTTCCGGCACATCACCCTGGATCTGGAAGGATATTCCAGAGGGAGCAT GAACGAACCCTCATGA
Upstream 100 bases:
>100_bases TACCGGAAAGCGGAATTTGAAGATTGCAGAATCCTGGCGGAAAAAACCGGATTGCCGCTGGGACAATGCCAGCTGATGGG GCTTTTTCCCACATCTTCCC
Downstream 100 bases:
>100_bases ACGACATCACCTCCATTCTGCATCAATTTAAAAAAGGCCTCCTTTCTGCGGAGGAAGCGGCGGAAAAAATTAGAGCCGGC ACCGTACCCGCTCCTTCCCA
Product: ExsB family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTTTPQTPFERLRAVLLPRKRIAVALSGGLDSSVLLAAAVRILGADHCLALTARTPYVMEEEVRDSTALCRRLGVRQEKL AFPILPALANNPPLRCYLCKHALFSSLAARAAEMGFPLLADGSNLDDLDDYRPGRKALQELGIPSPFLEASMDKEDIRRL ACRLGLPESVSGKPAYACLLTRLEHNRPVTEVLLRRVDAAESFLRTLGLKGCRVRAHGDSLARIELPEKERRLFWDGQLA STAARRLRELGFRHITLDLEGYSRGSMNEPS
Sequences:
>Translated_271_residues MTTTPQTPFERLRAVLLPRKRIAVALSGGLDSSVLLAAAVRILGADHCLALTARTPYVMEEEVRDSTALCRRLGVRQEKL AFPILPALANNPPLRCYLCKHALFSSLAARAAEMGFPLLADGSNLDDLDDYRPGRKALQELGIPSPFLEASMDKEDIRRL ACRLGLPESVSGKPAYACLLTRLEHNRPVTEVLLRRVDAAESFLRTLGLKGCRVRAHGDSLARIELPEKERRLFWDGQLA STAARRLRELGFRHITLDLEGYSRGSMNEPS >Mature_270_residues TTTPQTPFERLRAVLLPRKRIAVALSGGLDSSVLLAAAVRILGADHCLALTARTPYVMEEEVRDSTALCRRLGVRQEKLA FPILPALANNPPLRCYLCKHALFSSLAARAAEMGFPLLADGSNLDDLDDYRPGRKALQELGIPSPFLEASMDKEDIRRLA CRLGLPESVSGKPAYACLLTRLEHNRPVTEVLLRRVDAAESFLRTLGLKGCRVRAHGDSLARIELPEKERRLFWDGQLAS TAARRLRELGFRHITLDLEGYSRGSMNEPS
Specific function: Unknown
COG id: COG1606
COG function: function code R; ATP-utilizing enzymes of the PP-loop superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0830 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005232 - InterPro: IPR022310 - InterPro: IPR014729 [H]
Pfam domain/function: PF02540 NAD_synthase [H]
EC number: NA
Molecular weight: Translated: 30024; Mature: 29893
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTPQTPFERLRAVLLPRKRIAVALSGGLDSSVLLAAAVRILGADHCLALTARTPYVME CCCCCCCHHHHHHHHHCCCHHEEEEECCCCCHHHHHHHHHHHHCCCHHEEEECCCCCHHH EEVRDSTALCRRLGVRQEKLAFPILPALANNPPLRCYLCKHALFSSLAARAAEMGFPLLA HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEE DGSNLDDLDDYRPGRKALQELGIPSPFLEASMDKEDIRRLACRLGLPESVSGKPAYACLL CCCCCCCHHHCCCHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH TRLEHNRPVTEVLLRRVDAAESFLRTLGLKGCRVRAHGDSLARIELPEKERRLFWDGQLA HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCHHHHHEEECCHHH STAARRLRELGFRHITLDLEGYSRGSMNEPS HHHHHHHHHCCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure TTTPQTPFERLRAVLLPRKRIAVALSGGLDSSVLLAAAVRILGADHCLALTARTPYVME CCCCCCHHHHHHHHHCCCHHEEEEECCCCCHHHHHHHHHHHHCCCHHEEEECCCCCHHH EEVRDSTALCRRLGVRQEKLAFPILPALANNPPLRCYLCKHALFSSLAARAAEMGFPLLA HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEE DGSNLDDLDDYRPGRKALQELGIPSPFLEASMDKEDIRRLACRLGLPESVSGKPAYACLL CCCCCCCHHHCCCHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH TRLEHNRPVTEVLLRRVDAAESFLRTLGLKGCRVRAHGDSLARIELPEKERRLFWDGQLA HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCHHHHHEEECCHHH STAARRLRELGFRHITLDLEGYSRGSMNEPS HHHHHHHHHCCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]