Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736083

Identifier: 187736083

GI number: 187736083

Start: 1917778

End: 1918533

Strand: Reverse

Name: 187736083

Synonym: Amuc_1594

Alternate gene names: NA

Gene position: 1918533-1917778 (Counterclockwise)

Preceding gene: 187736084

Following gene: 187736082

Centisome position: 72.01

GC content: 62.17

Gene sequence:

>756_bases
ATGAACGACATCACCTCCATTCTGCATCAATTTAAAAAAGGCCTCCTTTCTGCGGAGGAAGCGGCGGAAAAAATTAGAGC
CGGCACCGTACCCGCTCCTTCCCATACGGACATTGATTACAGCCGCCTGGAACGCACCGGGTGCCCGGAAGTCATTTACG
GCGCAGGAAAAACGCCGGACCAGATTGAAGAGATAGCCCGCAGCCTGCTTGCCGCCGGACAAAATGTTCTGGCCACGCGT
CTGAGCGGGGAAGCTCTGGACTACCTGAACCGCGCCTTTCCGGCGGCGGACATGCACCCGGAAGCCCGTCTCATGCGCAT
TGCTCCGAATCCCGTTCCGCGAACGGCGGGCTTCGTCGGCATCGTCAGCGCGGGGACCTCGGACCAATACGTAGCGGAGG
AGGCCGCCCTGACGGCGGAATTTCTGGGCAGCCGGGTAGTCCGGTACCGGGATTGCGGCGTGGCCGGCCTGCACCGCCTG
GTTTCCCATCTGGACTCCATCCGCCAAGCTACTGCGCTGGTGGCCGTGGCGGGCATGGAAGGAGCTCTCCCCAGCGTGCT
GGCAGGCCTGGTAAAGGCCCCTGTGATAGCCGTGCCTACCAGCGTGGGCTATGGAGCCAATTTCCGCGGGGTAACCACCC
TGCTCGCCATGATGAATTCCTGCGCCAACGGTGTTTCCGTCGTCAACATAGACAACGGCTTCGGGGCCGGTTTCAACGCC
CACCTGATCAACAGCCTGGCATCCCGGCCCAGCTGA

Upstream 100 bases:

>100_bases
AGCTTGCCTCCACCGCAGCACGCCGGCTGCGGGAACTGGGCTTCCGGCACATCACCCTGGATCTGGAAGGATATTCCAGA
GGGAGCATGAACGAACCCTC

Downstream 100 bases:

>100_bases
GGGCCGCCTGTCCATGACGGAACCTCCGGCATCCGTCATGGACAGATCCTCCGAATAGGCTTTAAATGTTCCGGAAACAT
CCCTCTCCATTCCCGTCATG

Product: NCAIR mutase (PurE)-related protein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNDITSILHQFKKGLLSAEEAAEKIRAGTVPAPSHTDIDYSRLERTGCPEVIYGAGKTPDQIEEIARSLLAAGQNVLATR
LSGEALDYLNRAFPAADMHPEARLMRIAPNPVPRTAGFVGIVSAGTSDQYVAEEAALTAEFLGSRVVRYRDCGVAGLHRL
VSHLDSIRQATALVAVAGMEGALPSVLAGLVKAPVIAVPTSVGYGANFRGVTTLLAMMNSCANGVSVVNIDNGFGAGFNA
HLINSLASRPS

Sequences:

>Translated_251_residues
MNDITSILHQFKKGLLSAEEAAEKIRAGTVPAPSHTDIDYSRLERTGCPEVIYGAGKTPDQIEEIARSLLAAGQNVLATR
LSGEALDYLNRAFPAADMHPEARLMRIAPNPVPRTAGFVGIVSAGTSDQYVAEEAALTAEFLGSRVVRYRDCGVAGLHRL
VSHLDSIRQATALVAVAGMEGALPSVLAGLVKAPVIAVPTSVGYGANFRGVTTLLAMMNSCANGVSVVNIDNGFGAGFNA
HLINSLASRPS
>Mature_251_residues
MNDITSILHQFKKGLLSAEEAAEKIRAGTVPAPSHTDIDYSRLERTGCPEVIYGAGKTPDQIEEIARSLLAAGQNVLATR
LSGEALDYLNRAFPAADMHPEARLMRIAPNPVPRTAGFVGIVSAGTSDQYVAEEAALTAEFLGSRVVRYRDCGVAGLHRL
VSHLDSIRQATALVAVAGMEGALPSVLAGLVKAPVIAVPTSVGYGANFRGVTTLLAMMNSCANGVSVVNIDNGFGAGFNA
HLINSLASRPS

Specific function: Unknown

COG id: COG1691

COG function: function code R; NCAIR mutase (PurE)-related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000031 [H]

Pfam domain/function: PF00731 AIRC [H]

EC number: NA

Molecular weight: Translated: 26266; Mature: 26266

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDITSILHQFKKGLLSAEEAAEKIRAGTVPAPSHTDIDYSRLERTGCPEVIYGAGKTPD
CCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHEECCCCCHH
QIEEIARSLLAAGQNVLATRLSGEALDYLNRAFPAADMHPEARLMRIAPNPVPRTAGFVG
HHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHCCCCCCCCHHHEEEECCCCCCCCCCEEE
IVSAGTSDQYVAEEAALTAEFLGSRVVRYRDCGVAGLHRLVSHLDSIRQATALVAVAGME
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
GALPSVLAGLVKAPVIAVPTSVGYGANFRGVTTLLAMMNSCANGVSVVNIDNGFGAGFNA
CCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH
HLINSLASRPS
HHHHHHHCCCC
>Mature Secondary Structure
MNDITSILHQFKKGLLSAEEAAEKIRAGTVPAPSHTDIDYSRLERTGCPEVIYGAGKTPD
CCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHEECCCCCHH
QIEEIARSLLAAGQNVLATRLSGEALDYLNRAFPAADMHPEARLMRIAPNPVPRTAGFVG
HHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHCCCCCCCCHHHEEEECCCCCCCCCCEEE
IVSAGTSDQYVAEEAALTAEFLGSRVVRYRDCGVAGLHRLVSHLDSIRQATALVAVAGME
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
GALPSVLAGLVKAPVIAVPTSVGYGANFRGVTTLLAMMNSCANGVSVVNIDNGFGAGFNA
CCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH
HLINSLASRPS
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]