Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736083
Identifier: 187736083
GI number: 187736083
Start: 1917778
End: 1918533
Strand: Reverse
Name: 187736083
Synonym: Amuc_1594
Alternate gene names: NA
Gene position: 1918533-1917778 (Counterclockwise)
Preceding gene: 187736084
Following gene: 187736082
Centisome position: 72.01
GC content: 62.17
Gene sequence:
>756_bases ATGAACGACATCACCTCCATTCTGCATCAATTTAAAAAAGGCCTCCTTTCTGCGGAGGAAGCGGCGGAAAAAATTAGAGC CGGCACCGTACCCGCTCCTTCCCATACGGACATTGATTACAGCCGCCTGGAACGCACCGGGTGCCCGGAAGTCATTTACG GCGCAGGAAAAACGCCGGACCAGATTGAAGAGATAGCCCGCAGCCTGCTTGCCGCCGGACAAAATGTTCTGGCCACGCGT CTGAGCGGGGAAGCTCTGGACTACCTGAACCGCGCCTTTCCGGCGGCGGACATGCACCCGGAAGCCCGTCTCATGCGCAT TGCTCCGAATCCCGTTCCGCGAACGGCGGGCTTCGTCGGCATCGTCAGCGCGGGGACCTCGGACCAATACGTAGCGGAGG AGGCCGCCCTGACGGCGGAATTTCTGGGCAGCCGGGTAGTCCGGTACCGGGATTGCGGCGTGGCCGGCCTGCACCGCCTG GTTTCCCATCTGGACTCCATCCGCCAAGCTACTGCGCTGGTGGCCGTGGCGGGCATGGAAGGAGCTCTCCCCAGCGTGCT GGCAGGCCTGGTAAAGGCCCCTGTGATAGCCGTGCCTACCAGCGTGGGCTATGGAGCCAATTTCCGCGGGGTAACCACCC TGCTCGCCATGATGAATTCCTGCGCCAACGGTGTTTCCGTCGTCAACATAGACAACGGCTTCGGGGCCGGTTTCAACGCC CACCTGATCAACAGCCTGGCATCCCGGCCCAGCTGA
Upstream 100 bases:
>100_bases AGCTTGCCTCCACCGCAGCACGCCGGCTGCGGGAACTGGGCTTCCGGCACATCACCCTGGATCTGGAAGGATATTCCAGA GGGAGCATGAACGAACCCTC
Downstream 100 bases:
>100_bases GGGCCGCCTGTCCATGACGGAACCTCCGGCATCCGTCATGGACAGATCCTCCGAATAGGCTTTAAATGTTCCGGAAACAT CCCTCTCCATTCCCGTCATG
Product: NCAIR mutase (PurE)-related protein-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MNDITSILHQFKKGLLSAEEAAEKIRAGTVPAPSHTDIDYSRLERTGCPEVIYGAGKTPDQIEEIARSLLAAGQNVLATR LSGEALDYLNRAFPAADMHPEARLMRIAPNPVPRTAGFVGIVSAGTSDQYVAEEAALTAEFLGSRVVRYRDCGVAGLHRL VSHLDSIRQATALVAVAGMEGALPSVLAGLVKAPVIAVPTSVGYGANFRGVTTLLAMMNSCANGVSVVNIDNGFGAGFNA HLINSLASRPS
Sequences:
>Translated_251_residues MNDITSILHQFKKGLLSAEEAAEKIRAGTVPAPSHTDIDYSRLERTGCPEVIYGAGKTPDQIEEIARSLLAAGQNVLATR LSGEALDYLNRAFPAADMHPEARLMRIAPNPVPRTAGFVGIVSAGTSDQYVAEEAALTAEFLGSRVVRYRDCGVAGLHRL VSHLDSIRQATALVAVAGMEGALPSVLAGLVKAPVIAVPTSVGYGANFRGVTTLLAMMNSCANGVSVVNIDNGFGAGFNA HLINSLASRPS >Mature_251_residues MNDITSILHQFKKGLLSAEEAAEKIRAGTVPAPSHTDIDYSRLERTGCPEVIYGAGKTPDQIEEIARSLLAAGQNVLATR LSGEALDYLNRAFPAADMHPEARLMRIAPNPVPRTAGFVGIVSAGTSDQYVAEEAALTAEFLGSRVVRYRDCGVAGLHRL VSHLDSIRQATALVAVAGMEGALPSVLAGLVKAPVIAVPTSVGYGANFRGVTTLLAMMNSCANGVSVVNIDNGFGAGFNA HLINSLASRPS
Specific function: Unknown
COG id: COG1691
COG function: function code R; NCAIR mutase (PurE)-related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: NA
Molecular weight: Translated: 26266; Mature: 26266
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDITSILHQFKKGLLSAEEAAEKIRAGTVPAPSHTDIDYSRLERTGCPEVIYGAGKTPD CCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHEECCCCCHH QIEEIARSLLAAGQNVLATRLSGEALDYLNRAFPAADMHPEARLMRIAPNPVPRTAGFVG HHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHCCCCCCCCHHHEEEECCCCCCCCCCEEE IVSAGTSDQYVAEEAALTAEFLGSRVVRYRDCGVAGLHRLVSHLDSIRQATALVAVAGME EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC GALPSVLAGLVKAPVIAVPTSVGYGANFRGVTTLLAMMNSCANGVSVVNIDNGFGAGFNA CCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH HLINSLASRPS HHHHHHHCCCC >Mature Secondary Structure MNDITSILHQFKKGLLSAEEAAEKIRAGTVPAPSHTDIDYSRLERTGCPEVIYGAGKTPD CCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHEECCCCCHH QIEEIARSLLAAGQNVLATRLSGEALDYLNRAFPAADMHPEARLMRIAPNPVPRTAGFVG HHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHCCCCCCCCHHHEEEECCCCCCCCCCEEE IVSAGTSDQYVAEEAALTAEFLGSRVVRYRDCGVAGLHRLVSHLDSIRQATALVAVAGME EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC GALPSVLAGLVKAPVIAVPTSVGYGANFRGVTTLLAMMNSCANGVSVVNIDNGFGAGFNA CCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH HLINSLASRPS HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]