Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is yaeL [C]
Identifier: 187736048
GI number: 187736048
Start: 1870950
End: 1872395
Strand: Direct
Name: yaeL [C]
Synonym: Amuc_1558
Alternate gene names: 187736048
Gene position: 1870950-1872395 (Clockwise)
Preceding gene: 187736047
Following gene: 187736049
Centisome position: 70.23
GC content: 56.15
Gene sequence:
>1446_bases ATGGATAGCATTCTTTCCGTCCTTGCCACTATCGCCATTATTTTCGGCGTGGTGATGTTGTTTAACTTCATGATTTTTAT TCATGAACTTGGTCATTTTTTCGCTGCCCGCTGGCGTGGTCTGTATGTGGACAGATTTCAAATCTGGTTTGGCCGTCCCA TCTGGAAAAAAACGGTTAACGGCGTGCAGTGGGGGCTGGGGTGGATTCCGGCCGGAGGTTTTGTATCCCTGCCGCAGATG GCTCCTATGGAGGCCATTGAAGGACGTGCGGAGCTTCCCAAGGATTTGAAGCCGGTTACTCCCTTGGACAAGATTATCGT GGCCGCCGCTGGGCCTGCCGCTTCTTTTCTGCTGGCTGTGTTGTTTGCCGTGGCCGTCTGGATGGTGGGCAAGCCGGATG TGGAGATGGGCGTGACTACGGTCGGTTTTGTTGCTCCGGACAGCCCTGCGGCTCAGGCCGGCATTCTTCCCGGCGACAAG ATTGTGAAAGTGGACGGCCATCCTGTGGACAAGTGGGCGGGCAATATGGAAGGCGTGCGGGAATTGATCATGCTGGGCGA GCATGACCGGGTGGTTTTTACGGTGCAGAGACCTGGACATGAAGGAGAGATGGAAATTTCCTGCGGATTCCGGATTCCGG AAACGTCCTGGTGGCAGCGCTCCGGCATGCGTCAGGTGGGGTTGATGCAGGCCATGCCCTGCGTGATTGGGGAAGTGATT CCCAATTCTCCTGCCGCACTGGCCGGATTGAACCCGGGCGATAAGGTTGTGGGTGCCAATGGAGAACGCCTCTGGAACCC TGCCGCACTGGATGTTCTGCTGAAGAAGAATGAACCGCTCTTGCTGGATGTGACGGACAGGGCCGGGGTTGCAAGGCAGG TGAATATCCAGGGGAAGCTTCCGGAGAATTGGCACAATGGTGCGGACGGTTCCCTGCTCAAGGGGGCCCAGCCTATTCTG GGCGTGAGCTGGGACCTGAGTTCCGTGGGCCGAGACGTTACCGTCCATCCTTCTCCGTGGGCGCAGATCAAGCAGAGTCT GAAATGGATGGGGGATACCCTGGCGAAGGTGGTGGCTCCCGGCAGCAGCGTGGGCGTGGAGCATCTTTCCGGACCTGTGG GAATTGCCAATCAGTTTTACAAGATGTTCTCTCTGGAGGAAGGGTGGAAGCTGGCCCTGTGGTTTTCCGTGGTGTTGAAC GTGAACCTGGCGGTTCTGAATATTCTGCCTCTTCCGGTAGTGGATGGCGGCCATGTGGTCATGAATGCCATTGAATTGGT TTTCCGGCGTCCCCTGAATGTAAAAGTTCTGGAATTCGTCCAGTTCGGCTTTGTGTTCCTGCTGATGGGGTTCTTCCTGT TTGTGACATTCAAGGATGTGGGGGATTTCTTTGGCAAGAAGCCGGACAAGCTGCCCACCCCGGTATTCAAGGCCGTCGCG GATTAG
Upstream 100 bases:
>100_bases TGAAATCCATTTGGAATATCAGCATCCACTTTGTCATTAGGACATCTTTGAAGCTTGTTCACCGGAGAGTCCCGTGGTAA CTTGGACGGCAAAAACTACC
Downstream 100 bases:
>100_bases TTGCGGACGGCGTTTTTTATCCCGGTCTGTTCCATGAAGCAGTCACTGGCGGCGCGTTTCCTGTTCCGGGCGGTGGTGCT GGCGTTTCTTGTGTATGCCA
Product: peptidase M50
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MDSILSVLATIAIIFGVVMLFNFMIFIHELGHFFAARWRGLYVDRFQIWFGRPIWKKTVNGVQWGLGWIPAGGFVSLPQM APMEAIEGRAELPKDLKPVTPLDKIIVAAAGPAASFLLAVLFAVAVWMVGKPDVEMGVTTVGFVAPDSPAAQAGILPGDK IVKVDGHPVDKWAGNMEGVRELIMLGEHDRVVFTVQRPGHEGEMEISCGFRIPETSWWQRSGMRQVGLMQAMPCVIGEVI PNSPAALAGLNPGDKVVGANGERLWNPAALDVLLKKNEPLLLDVTDRAGVARQVNIQGKLPENWHNGADGSLLKGAQPIL GVSWDLSSVGRDVTVHPSPWAQIKQSLKWMGDTLAKVVAPGSSVGVEHLSGPVGIANQFYKMFSLEEGWKLALWFSVVLN VNLAVLNILPLPVVDGGHVVMNAIELVFRRPLNVKVLEFVQFGFVFLLMGFFLFVTFKDVGDFFGKKPDKLPTPVFKAVA D
Sequences:
>Translated_481_residues MDSILSVLATIAIIFGVVMLFNFMIFIHELGHFFAARWRGLYVDRFQIWFGRPIWKKTVNGVQWGLGWIPAGGFVSLPQM APMEAIEGRAELPKDLKPVTPLDKIIVAAAGPAASFLLAVLFAVAVWMVGKPDVEMGVTTVGFVAPDSPAAQAGILPGDK IVKVDGHPVDKWAGNMEGVRELIMLGEHDRVVFTVQRPGHEGEMEISCGFRIPETSWWQRSGMRQVGLMQAMPCVIGEVI PNSPAALAGLNPGDKVVGANGERLWNPAALDVLLKKNEPLLLDVTDRAGVARQVNIQGKLPENWHNGADGSLLKGAQPIL GVSWDLSSVGRDVTVHPSPWAQIKQSLKWMGDTLAKVVAPGSSVGVEHLSGPVGIANQFYKMFSLEEGWKLALWFSVVLN VNLAVLNILPLPVVDGGHVVMNAIELVFRRPLNVKVLEFVQFGFVFLLMGFFLFVTFKDVGDFFGKKPDKLPTPVFKAVA D >Mature_481_residues MDSILSVLATIAIIFGVVMLFNFMIFIHELGHFFAARWRGLYVDRFQIWFGRPIWKKTVNGVQWGLGWIPAGGFVSLPQM APMEAIEGRAELPKDLKPVTPLDKIIVAAAGPAASFLLAVLFAVAVWMVGKPDVEMGVTTVGFVAPDSPAAQAGILPGDK IVKVDGHPVDKWAGNMEGVRELIMLGEHDRVVFTVQRPGHEGEMEISCGFRIPETSWWQRSGMRQVGLMQAMPCVIGEVI PNSPAALAGLNPGDKVVGANGERLWNPAALDVLLKKNEPLLLDVTDRAGVARQVNIQGKLPENWHNGADGSLLKGAQPIL GVSWDLSSVGRDVTVHPSPWAQIKQSLKWMGDTLAKVVAPGSSVGVEHLSGPVGIANQFYKMFSLEEGWKLALWFSVVLN VNLAVLNILPLPVVDGGHVVMNAIELVFRRPLNVKVLEFVQFGFVFLLMGFFLFVTFKDVGDFFGKKPDKLPTPVFKAVA D
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1786373, Length=466, Percent_Identity=27.8969957081545, Blast_Score=130, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR004387 - InterPro: IPR008915 [H]
Pfam domain/function: PF00595 PDZ; PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 52435; Mature: 52435
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: PS50106 PDZ ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSILSVLATIAIIFGVVMLFNFMIFIHELGHFFAARWRGLYVDRFQIWFGRPIWKKTVN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHC GVQWGLGWIPAGGFVSLPQMAPMEAIEGRAELPKDLKPVTPLDKIIVAAAGPAASFLLAV CHHCCCCEECCCCCEECCCCCCHHHHCCHHCCCCCCCCCCCHHHHHEECCCHHHHHHHHH LFAVAVWMVGKPDVEMGVTTVGFVAPDSPAAQAGILPGDKIVKVDGHPVDKWAGNMEGVR HHHHHHHHCCCCCCHHCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCHHHHH ELIMLGEHDRVVFTVQRPGHEGEMEISCGFRIPETSWWQRSGMRQVGLMQAMPCVIGEVI HHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHC PNSPAALAGLNPGDKVVGANGERLWNPAALDVLLKKNEPLLLDVTDRAGVARQVNIQGKL CCCCCEEECCCCCCCEECCCCCCCCCHHHHHHEEECCCCEEEEECCCCCCEEEEEECCCC PENWHNGADGSLLKGAQPILGVSWDLSSVGRDVTVHPSPWAQIKQSLKWMGDTLAKVVAP CCCCCCCCCCCHHCCCCCCEEEECCHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCC GSSVGVEHLSGPVGIANQFYKMFSLEEGWKLALWFSVVLNVNLAVLNILPLPVVDGGHVV CCCCCHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCHHH MNAIELVFRRPLNVKVLEFVQFGFVFLLMGFFLFVTFKDVGDFFGKKPDKLPTPVFKAVA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHC D C >Mature Secondary Structure MDSILSVLATIAIIFGVVMLFNFMIFIHELGHFFAARWRGLYVDRFQIWFGRPIWKKTVN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHC GVQWGLGWIPAGGFVSLPQMAPMEAIEGRAELPKDLKPVTPLDKIIVAAAGPAASFLLAV CHHCCCCEECCCCCEECCCCCCHHHHCCHHCCCCCCCCCCCHHHHHEECCCHHHHHHHHH LFAVAVWMVGKPDVEMGVTTVGFVAPDSPAAQAGILPGDKIVKVDGHPVDKWAGNMEGVR HHHHHHHHCCCCCCHHCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCHHHHH ELIMLGEHDRVVFTVQRPGHEGEMEISCGFRIPETSWWQRSGMRQVGLMQAMPCVIGEVI HHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHC PNSPAALAGLNPGDKVVGANGERLWNPAALDVLLKKNEPLLLDVTDRAGVARQVNIQGKL CCCCCEEECCCCCCCEECCCCCCCCCHHHHHHEEECCCCEEEEECCCCCCEEEEEECCCC PENWHNGADGSLLKGAQPILGVSWDLSSVGRDVTVHPSPWAQIKQSLKWMGDTLAKVVAP CCCCCCCCCCCHHCCCCCCEEEECCHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCC GSSVGVEHLSGPVGIANQFYKMFSLEEGWKLALWFSVVLNVNLAVLNILPLPVVDGGHVV CCCCCHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCHHH MNAIELVFRRPLNVKVLEFVQFGFVFLLMGFFLFVTFKDVGDFFGKKPDKLPTPVFKAVA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]